Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d14r
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 25 0.68
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 25 0.68
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 25 0.89
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.3
DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse tr... 21 8.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 8.3
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 25.0 bits (52), Expect = 0.68
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 427 ILLKREIASKFSEMTNFWKKYIKIQ 353
++ K E+AS + MT F+KKY + Q
Sbjct: 38 VVRKDEVASGIAVMTAFFKKYPEYQ 62
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 25.0 bits (52), Expect = 0.68
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 427 ILLKREIASKFSEMTNFWKKYIKIQ 353
++ K E+AS + MT F+KKY + Q
Sbjct: 38 VVRKDEVASGIAVMTAFFKKYPEYQ 62
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.6 bits (51), Expect = 0.89
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 4 SYHTILNKISYCYHYNILTIYDVNNYVHK 90
S TI N +Y Y+YN Y+ NNY K
Sbjct: 86 SNKTIHNNNNYKYNYNNKYNYNNNNYNKK 114
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -1
Query: 212 KHVHL*RHHKFNGSHHSHAPSILELHH 132
K L RHH HH + ++ HH
Sbjct: 134 KQETLQRHHHLQNHHHHLQSTAVQDHH 160
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 16 ILNKISYCYHYNILTIYDVNNYVHKRSIKIQ 108
I++ +S Y Y+ Y+ NNY + K+Q
Sbjct: 81 IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 16 ILNKISYCYHYNILTIYDVNNYVHKRSIKIQ 108
I++ +S Y Y+ Y+ NNY + K+Q
Sbjct: 81 IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 16 ILNKISYCYHYNILTIYDVNNYVHKRSIKIQ 108
I++ +S Y Y+ Y+ NNY + K+Q
Sbjct: 81 IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 16 ILNKISYCYHYNILTIYDVNNYVHKRSIKIQ 108
I++ +S Y Y+ Y+ NNY + K+Q
Sbjct: 81 IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse
transcriptase protein.
Length = 42
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 94 TFYVHNC*HHKLLI 53
T++ C HHK+LI
Sbjct: 16 TYFQQYCLHHKILI 29
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 474 FLLFHSSENLLLICVVSLCSTLRI 545
+LLF + L CVV CST +
Sbjct: 141 YLLFATLPLRLSFCVVLACSTATV 164
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 558 VEAKEFVGLNRVKQHRLVTDSLKNEIAEMHGIRIHTTPA 442
V K+ + +Q ++ S I +HG+++ TPA
Sbjct: 1225 VLGKQQPSQQQTQQQPIILPSQLLNIKTLHGLKVIPTPA 1263
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +2
Query: 578 PQPPDISCTLMYVIPGIAFFNASVSCC 658
P+PP+ C+L + + A CC
Sbjct: 580 PEPPESVCSLPCEVGQAKKYVAGEQCC 606
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,389
Number of Sequences: 438
Number of extensions: 3991
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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