Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d12f
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96067 Cluster: CG1935-PA; n=3; Sophophora|Rep: CG1935-...   135   9e-31
UniRef50_Q7Q8E4 Cluster: ENSANGP00000014474; n=5; Endopterygota|...   133   3e-30
UniRef50_Q9N4B5 Cluster: Jtb gene related protein 1; n=3; Caenor...    58   1e-07
UniRef50_Q5PPV6 Cluster: LOC496066 protein; n=1; Xenopus laevis|...    56   5e-07
UniRef50_O76095 Cluster: Protein JTB precursor; n=13; Bilateria|...    56   9e-07
UniRef50_UPI0000F2BDB2 Cluster: PREDICTED: similar to hJTB; n=2;...    55   1e-06
UniRef50_UPI0000E46D9F Cluster: PREDICTED: hypothetical protein;...    53   7e-06
UniRef50_Q1L895 Cluster: Novel protein similar to vertebrate jum...    49   8e-05
UniRef50_Q4T335 Cluster: Chromosome undetermined SCAF10125, whol...    45   0.002
UniRef50_UPI0000E48AA6 Cluster: PREDICTED: similar to TFP250; n=...    33   5.7  
UniRef50_A5DH81 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_A7F5R0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q1WU12 Cluster: Putative uncharacterized protein; n=1; ...    32   9.9  

>UniRef50_O96067 Cluster: CG1935-PA; n=3; Sophophora|Rep: CG1935-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 152

 Score =  135 bits (326), Expect = 9e-31
 Identities = 63/142 (44%), Positives = 88/142 (61%)
 Frame = +2

Query: 155 MIETCSKRXXXXXXXXXXXXXVIVLIVESRLAERLSSSHRMKNKTFPTENNSTCWVYQPY 334
           M+E C +              ++VL VESR A   +   R +   F  E+NSTCW  + Y
Sbjct: 1   MLENCQRHHMLLGLGALTMVTILVLFVESRYA---ADGPRRREPQFVIEDNSTCWRNEKY 57

Query: 335 KVISECHPCSDFEIRSKSIGVCIHTSFKEILKCENGETVTRSCDRVAYLEKWAYWKFTIW 514
            ++ ECHPCS+F+I S+S+GVCIHT +KE+L+C++GE VTRSCDRVA +E+  + KF + 
Sbjct: 58  TMVQECHPCSEFDIVSRSLGVCIHTHYKEVLRCQSGEIVTRSCDRVALIEQMNFLKFEVS 117

Query: 515 SFVIGAASSIAVMLRMRVLNYR 580
            FVIG  S +    R RVL+ R
Sbjct: 118 CFVIGLLSYLVSYARDRVLSRR 139


>UniRef50_Q7Q8E4 Cluster: ENSANGP00000014474; n=5;
           Endopterygota|Rep: ENSANGP00000014474 - Anopheles
           gambiae str. PEST
          Length = 150

 Score =  133 bits (322), Expect = 3e-30
 Identities = 67/142 (47%), Positives = 87/142 (61%)
 Frame = +2

Query: 155 MIETCSKRXXXXXXXXXXXXXVIVLIVESRLAERLSSSHRMKNKTFPTENNSTCWVYQPY 334
           MIE  SK+             ++VLI+ES+  +  + S R +   F  ENNSTCW  + Y
Sbjct: 1   MIENLSKKRMVFGISCLILLTIVVLIIESKWMK--AGSRRQE---FVIENNSTCWQRETY 55

Query: 335 KVISECHPCSDFEIRSKSIGVCIHTSFKEILKCENGETVTRSCDRVAYLEKWAYWKFTIW 514
           +VI +CHPC+ FEI SKS GVC+HT  KE+LKC  GE VTRSCDRVA+L++  YW F I 
Sbjct: 56  EVIKDCHPCTAFEIASKSQGVCVHTHNKEVLKCIGGEIVTRSCDRVAWLDERHYWSFQIS 115

Query: 515 SFVIGAASSIAVMLRMRVLNYR 580
             +IG  S+    LR + LN R
Sbjct: 116 LTIIGTLSAAVSFLRQKTLNRR 137


>UniRef50_Q9N4B5 Cluster: Jtb gene related protein 1; n=3;
           Caenorhabditis|Rep: Jtb gene related protein 1 -
           Caenorhabditis elegans
          Length = 167

 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
 Frame = +2

Query: 158 IETCSKRXXXXXXXXXXXXXVIVLIVESRLAE-RLSSSHRMKNKTFPTENNST------- 313
           +E CS +             ++V  +E    E  ++S   MK   + TE+  T       
Sbjct: 1   MEYCSTKQISTFVLALIGFSILVFFIEEYTEESEMNSEMEMKKAFYKTEHGGTTGKLEKV 60

Query: 314 --------CWVYQPYKVISECHPCSDFEIRSKSIGVCIHTSFKEILKC-ENGETVTRSCD 466
                   CW ++P++V+++C PC DFEI++   G C+ T + + + C ++  TV R C 
Sbjct: 61  VTEYPAEECWKHEPFEVVTQCAPCKDFEIKAIKAGHCLKTGYFDRVNCSKSSTTVLRPCP 120

Query: 467 RVAYLEKWAYWKFTIWSFVIGAASSIAVMLRMRVLNYRAKRRARQ 601
                 +  ++ F + +  I   S ++   R   L      R  Q
Sbjct: 121 SPKQSRRHEFYLFYVVNAAILIVSFLSTTQRKAQLERAVYMRLPQ 165


>UniRef50_Q5PPV6 Cluster: LOC496066 protein; n=1; Xenopus
           laevis|Rep: LOC496066 protein - Xenopus laevis (African
           clawed frog)
          Length = 135

 Score = 56.4 bits (130), Expect = 5e-07
 Identities = 31/116 (26%), Positives = 53/116 (45%)
 Frame = +2

Query: 254 RLSSSHRMKNKTFPTENNSTCWVYQPYKVISECHPCSDFEIRSKSIGVCIHTSFKEILKC 433
           R + S    ++T P   ++ CW+ + + +  EC+ C++FE R   I  C  T F + + C
Sbjct: 17  RWAESALTLDETHPEVLSTQCWMAEEFIISKECYSCTEFETRR--ITECRDTGFIQQINC 74

Query: 434 ENGETVTRSCDRVAYLEKWAYWKFTIWSFVIGAASSIAVMLRMRVLNYRAKRRARQ 601
              +       R   +EK  +WKF      +    S+ V  R R L+ RA  + R+
Sbjct: 75  AVSKRAEYKSCRSVEMEKQVFWKFVGCMMGVTVLFSLLVTYRQRTLDMRALEKVRK 130


>UniRef50_O76095 Cluster: Protein JTB precursor; n=13;
           Bilateria|Rep: Protein JTB precursor - Homo sapiens
           (Human)
          Length = 146

 Score = 55.6 bits (128), Expect = 9e-07
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = +2

Query: 278 KNKTFPTENNSTCWVYQPYKVISECHPCSDFEIRSKSIGVCIHTSFKEILKCENGE-TVT 454
           + K   + +N  CW+ + + V  EC PCS+F  R+K+   C  T + E + C + +    
Sbjct: 36  EEKLSASTSNLPCWLVEEFVVAEECSPCSNF--RAKTTPECGPTGYVEKITCSSSKRNEF 93

Query: 455 RSCDRVAYLEKWAYWKFTIWSFVIGAASSIAVMLRMRVLNYRAKRRARQ 601
           +SC R A +E+  +WKF      +    +  V++R R L+ +A  + R+
Sbjct: 94  KSC-RSALMEQRLFWKFEGAVVCVALIFACLVIIRQRQLDRKALEKVRK 141


>UniRef50_UPI0000F2BDB2 Cluster: PREDICTED: similar to hJTB; n=2;
           Amniota|Rep: PREDICTED: similar to hJTB - Monodelphis
           domestica
          Length = 193

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +2

Query: 314 CWVYQPYKVISECHPCSDFEIRSKSIGVCIHTSFKEILKCENGETVTRSCDRVAYLEKWA 493
           CWV + + V  EC PC+ F+  +K+   C  T F E + C   +       R A +E+  
Sbjct: 95  CWVVEDFVVAKECAPCTTFQ--AKTTPECGTTGFVEKISCSGSKRDEFKSCRSAMMERHL 152

Query: 494 YWKFTIWSFVIGAASSIA--VMLRMRVLNYRAKRRARQ 601
           +WKF     V+G A+  A  V+LR R L+ +A  + R+
Sbjct: 153 FWKFE--GAVVGVAAVFACLVILRQRSLDRKALEKVRK 188


>UniRef50_UPI0000E46D9F Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 135

 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
 Frame = +2

Query: 233 VESRLAERLSSSHRMKNKTFPTENNSTCWVYQPYKVISECHPCSDFEIRSKSIGVCIHTS 412
           VE R  E++         T    +  TCW  + +  I  C PC     +  +   C  T 
Sbjct: 8   VEER-EEKVDQEKEEYQNTNGAGSLKTCWETENFTFIGPCDPCHLLASKVYTDS-CSETG 65

Query: 413 FKEILKC-ENGETVTRSCDRVAYLEKWAYWKFTIWSFVIGAASSIAVMLRMRVLNYRAKR 589
           F+++++C ++ + V +SC R     + ++W F   + +IG  + + V +R R LN  A  
Sbjct: 66  FRQLVQCTDSNQQVYKSCPRSRESIEKSFWVFEGVTLLIGLVACMVVFVRRRKLNREAAE 125

Query: 590 RARQ 601
           R R+
Sbjct: 126 RVRK 129


>UniRef50_Q1L895 Cluster: Novel protein similar to vertebrate
           jumping translocation breakpoint; n=2; Danio rerio|Rep:
           Novel protein similar to vertebrate jumping
           translocation breakpoint - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 103

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
 Frame = +2

Query: 314 CWVYQPYKVISECHPCSDFEIRSKSIGVCIHTSFKEILKC-ENGETVTRSCDRVAYLEKW 490
           CW  + + V  EC  C   ++  K+I  C  T F E + C ++     +SC R   +E+ 
Sbjct: 5   CWQLEEFVVAKECSVCEGLQL--KTIPACSQTGFIEKINCTKSNRDEYKSC-RSTKMEEH 61

Query: 491 AYWKFTIWSFVIGAASSIAVMLRMRVLNYRAKRRARQ 601
            +WKF      +    +I V++R R L+ +A  + R+
Sbjct: 62  LFWKFEGTMLALTVVFAIIVVIRQRSLDRQASDKVRR 98


>UniRef50_Q4T335 Cluster: Chromosome undetermined SCAF10125, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF10125, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 150

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
 Frame = +2

Query: 314 CWVYQPYKVISECHPCSDFEIRSKSIGVCIHTSFKEILKC-ENGETVTRSCDRVAYLEKW 490
           CW  + + V SEC  C+ F+ RS +   C  T + E + C  + +   +SC     +E+ 
Sbjct: 52  CWRQEAFVVTSECQQCNAFQTRSWA--ACGPTGYVERVNCTRSNKDEIKSCSSTP-MEER 108

Query: 491 AYWKFTIWSFVIGAASSIAVMLRMRVLNYRAKRRARQ 601
            +WKF      +     + V+ R R L+     + R+
Sbjct: 109 RFWKFEALMLALALLFGVLVVARQRWLDRLVSEKVRR 145


>UniRef50_UPI0000E48AA6 Cluster: PREDICTED: similar to TFP250; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           TFP250 - Strongylocentrotus purpuratus
          Length = 2097

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 347 ECHPCSDFEIRSKSIGVCIHTSFKEILKCENGETVTRSCDR-VAYLEKWAYWKFTI-WSF 520
           E + C D+ +    +GVC+      I  CE G    + CD+  AYL    Y+  ++ WSF
Sbjct: 301 EINECIDYNVTCSDVGVCVDLIDDYICDCEYGYW-DKDCDKDAAYLYTSNYFAGSLYWSF 359


>UniRef50_A5DH81 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 854

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -2

Query: 267 LLDNLSASRDSTMRTITVNMPRHNVPRSIHLFEHVSIILGTFKIAQF 127
           L+ + +  R+ T+R I + +PR N+   +HL EH+  + G  +I  +
Sbjct: 649 LVSSYTHERNDTLR-ILLTIPRSNLSSLVHLLEHICCVFGLSQIPNY 694


>UniRef50_A7F5R0 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 554

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 442 SIFTLQNFFKTCMYTYSYTLTSNLKI*ARMTFTNNFVWLINPTG*VVLC 296
           S  T  N F    Y  + T T+  K+   +TFT+  VW + PT    +C
Sbjct: 139 STVTAYNNFTATAYPATATTTAISKVIETVTFTSPMVWFVQPTSTGAMC 187


>UniRef50_Q1WU12 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus salivarius subsp. salivarius UCC118|Rep:
           Putative uncharacterized protein - Lactobacillus
           salivarius subsp. salivarius (strain UCC118)
          Length = 206

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = -2

Query: 318 QQVELFSVGNVLFFIL*LLD--NLSASRDSTMRTITVNMPRHNVPRSIHLFEHVSII 154
           QQ  LFSV N+LFFI  LL   NL  S  ST+ +I V +   NV   I  FE+  ++
Sbjct: 132 QQKILFSVTNILFFIYSLLSLLNLRISTLSTILSIIV-LISFNVIIIIRQFEYTKLL 187


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,614,126
Number of Sequences: 1657284
Number of extensions: 10633189
Number of successful extensions: 23961
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23952
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)