Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d12f
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.69 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   0.91 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   8.5  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 412 TCMYTYSYTLTSNLKI*ARMTFTNNFVWLINPTG 311
           +C  T        L++   M   NN+ W+++PTG
Sbjct: 488 SCALTTRELPGETLRLFTCMECPNNYPWILDPTG 521


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 412 TCMYTYSYTLTSNLKI*ARMTFTNNFVWLINPTG 311
           +C  T        L++   M   NN+ W++ PTG
Sbjct: 495 SCALTTRELPGETLRLFTCMECPNNYPWILEPTG 528


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 407 YVYILLYSYFESQNLSKD 354
           Y+Y   YSY++S+N+  D
Sbjct: 15  YIYSKHYSYWQSKNVPTD 32


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 454 CHSFSIFTLQNFFKTCMYTY 395
           C +F IFT+   F  C+Y +
Sbjct: 269 CCAFIIFTMHLLFLLCIYYF 288


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 407 TSFKEILKCENGETVTRSC 463
           T+  ++++  NGET+  SC
Sbjct: 3   TAGSKVVEINNGETIIISC 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,139
Number of Sequences: 336
Number of extensions: 3050
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)