Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d10r
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   3.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.4  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 514 AVTRLQQFLVTHREWWSALDAQRSFVN 434
           AVT +   L+ ++E WS+L+    F++
Sbjct: 31  AVTIILSSLIFNQEQWSSLNKNFQFID 57


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 468 GLRWMLNDPLSTH 430
           G R+++ND LS H
Sbjct: 134 GFRYLVNDELSAH 146


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 468 GLRWMLNDPLSTH 430
           G R+++ND LS H
Sbjct: 448 GFRYLVNDELSAH 460


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 294 SLNQILTDTNMSLNKIVQDCAIH 362
           S+   LT   +SLNK +QD   H
Sbjct: 304 SITLALTCYELSLNKTIQDRLRH 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,954
Number of Sequences: 336
Number of extensions: 2865
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)