Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d10r
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...   142   1e-33
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.    142   1e-33
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...   142   1e-33
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...   142   1e-33
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...   142   1e-33
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...   142   1e-33
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.      139   6e-33
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...   136   6e-32
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...   135   1e-31
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    69   2e-11

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  142 bits (343), Expect = 1e-33
 Identities = 62/74 (83%), Positives = 66/74 (89%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 443 LCQPTGGRARLTEG 402
           LCQPTGG+ARLTEG
Sbjct: 63  LCQPTGGKARLTEG 76


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score =  142 bits (343), Expect = 1e-33
 Identities = 62/74 (83%), Positives = 66/74 (89%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 443 LCQPTGGRARLTEG 402
           LCQPTGG+ARLTEG
Sbjct: 63  LCQPTGGKARLTEG 76


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  142 bits (343), Expect = 1e-33
 Identities = 62/74 (83%), Positives = 66/74 (89%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 443 LCQPTGGRARLTEG 402
           LCQPTGG+ARLTEG
Sbjct: 63  LCQPTGGKARLTEG 76


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  142 bits (343), Expect = 1e-33
 Identities = 62/74 (83%), Positives = 66/74 (89%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 443 LCQPTGGRARLTEG 402
           LCQPTGG+ARLTEG
Sbjct: 63  LCQPTGGKARLTEG 76


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  142 bits (343), Expect = 1e-33
 Identities = 62/74 (83%), Positives = 66/74 (89%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 443 LCQPTGGRARLTEG 402
           LCQPTGG+ARLTEG
Sbjct: 63  LCQPTGGKARLTEG 76


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  142 bits (343), Expect = 1e-33
 Identities = 62/74 (83%), Positives = 66/74 (89%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 443 LCQPTGGRARLTEG 402
           LCQPTGG+ARLTEG
Sbjct: 63  LCQPTGGKARLTEG 76


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score =  139 bits (337), Expect = 6e-33
 Identities = 66/95 (69%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPS   E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 19  LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 78

Query: 443 LCQPTGGRARLTEGKML*SLKPE*PI-TMNCTILH 342
           LCQPTGG+ARLTEG     L+P   I    C  LH
Sbjct: 79  LCQPTGGKARLTEGISFGILQPSDEIDDYKCLYLH 113


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score =  136 bits (329), Expect = 6e-32
 Identities = 60/74 (81%), Positives = 65/74 (87%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 444
           LA DLLHPS   E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 443 LCQPTGGRARLTEG 402
           LCQPTGG+ARLTEG
Sbjct: 63  LCQPTGGKARLTEG 76


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score =  135 bits (327), Expect = 1e-31
 Identities = 58/69 (84%), Positives = 62/69 (89%)
 Frame = -1

Query: 614 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQ 435
           DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQ
Sbjct: 1   DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60

Query: 434 PTGGRARLT 408
           PTGG+ARLT
Sbjct: 61  PTGGKARLT 69


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 68.5 bits (160), Expect = 2e-11
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = -1

Query: 623 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 513
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPG
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,585,679
Number of Sequences: 237096
Number of extensions: 1524297
Number of successful extensions: 2192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2192
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)