Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d10f
(601 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 129 4e-29
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 125 7e-28
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 124 2e-27
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 124 2e-27
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 92 8e-18
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 77 2e-13
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 75 2e-12
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 74 3e-12
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 73 5e-12
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 69 1e-10
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 69 1e-10
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 56 6e-07
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 54 3e-06
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 49 7e-05
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;... 48 1e-04
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 46 0.001
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 45 0.001
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar... 45 0.002
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa... 44 0.004
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus... 43 0.006
UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:... 42 0.008
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 42 0.011
UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal ... 41 0.019
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 40 0.034
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 38 0.14
UniRef50_Q8ILE0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q9G8P4 Cluster: ABC transporter subunit; n=1; Naegleria... 34 2.9
UniRef50_Q332L3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 129 bits (312), Expect = 4e-29
Identities = 56/69 (81%), Positives = 60/69 (86%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 573 LCXPTGGRA 599
LC PTGG+A
Sbjct: 63 LCQPTGGKA 71
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 125 bits (302), Expect = 7e-28
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
LA+DLL+PSPASE RKHKLK LVP P S+FMDVKCPGC+ ITTVFSHAQ VV+C GC+T+
Sbjct: 3 LAVDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTV 62
Query: 573 LCXPTGGRA 599
LC PTGG+A
Sbjct: 63 LCQPTGGKA 71
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 124 bits (299), Expect = 2e-27
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
LA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3 LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62
Query: 573 LCXPTGGRA 599
LC PTGG+A
Sbjct: 63 LCQPTGGKA 71
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 124 bits (298), Expect = 2e-27
Identities = 54/69 (78%), Positives = 57/69 (82%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
LA D LHPSPA E+RKHKLKRLV PNSYFMDVKCPGCY I T+FSHAQR V C GC TI
Sbjct: 1982 LAKDFLHPSPAEEKRKHKLKRLVQKPNSYFMDVKCPGCYAIKTIFSHAQRPVECDGCRTI 2041
Query: 573 LCXPTGGRA 599
LC PTGG+A
Sbjct: 2042 LCTPTGGKA 2050
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 92.3 bits (219), Expect = 8e-18
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +3
Query: 399 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 578
+DLL+P P E+RKHKLKRLV PNSYF+++KC GC I V+SHA V C GC++ +
Sbjct: 3 VDLLYPDPVEEQRKHKLKRLVQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQIS 62
Query: 579 XPTGGR 596
PTGG+
Sbjct: 63 IPTGGK 68
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
L DLLHPSP ++RKHK K LV PNSYFMD+KCPGCYKITTVFSHAQ VV+ A T+
Sbjct: 3 LVKDLLHPSP-EKKRKHKKKHLVQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--QTL 59
Query: 573 LC 578
C
Sbjct: 60 RC 61
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 77.4 bits (182), Expect = 2e-13
Identities = 33/68 (48%), Positives = 42/68 (61%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
L +D+LHPS E +K K LVP+P S F+ ++CP C +TT FSH+ V C C T
Sbjct: 4 LDVDILHPSVEQEAHTNKKKTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTP 63
Query: 573 LCXPTGGR 596
L PTGGR
Sbjct: 64 LATPTGGR 71
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 74.5 bits (175), Expect = 2e-12
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +3
Query: 429 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
E+ KHK KR++P+PNSYF+++ C C +FSH+Q +VC C+ LC PTGG+A
Sbjct: 14 EKMKHKKKRIIPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKA 70
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 399 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 578
+DL +PS +E +KHKLKRL+ PNS+++ KC C KI +FSH+ C CST+L
Sbjct: 8 LDLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLT 67
Query: 579 XPTGGR 596
P+GG+
Sbjct: 68 RPSGGK 73
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 72.9 bits (171), Expect = 5e-12
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = +3
Query: 429 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPT 587
E+RKHK K LV P+SYFMDVK GCYK+ +FS VV+ GCST+ C PT
Sbjct: 202 EKRKHKKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +3
Query: 408 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 551
L + E+RKHK +RLV PNSYFMDV+CPG Y+ITTVFS AQ VV+
Sbjct: 174 LQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEITTVFSRAQTVVL 221
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
Length = 66
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 503
LA DLLHPSP E+RKHK KRLV PNSYFMDVKCPG
Sbjct: 3 LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 402 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 551
DLL+P E++K+K KRL+ PNSYFMDVKC C I +FS+AQ ++
Sbjct: 4 DLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTII 53
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/69 (37%), Positives = 36/69 (52%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
+A DL P+ +K RL N +FM V+C GC T +SH+Q + C GC I
Sbjct: 1 MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDI 60
Query: 573 LCXPTGGRA 599
+ +GGRA
Sbjct: 61 ILTSSGGRA 69
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 450 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
K L+P P S F+ +CP C FSHA VV C C +L PTGG+A
Sbjct: 7 KVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKA 56
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +3
Query: 450 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
K L+P P S F+ V CP C VFSH+ C C +L PTGG+A
Sbjct: 13 KVLIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKA 62
>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 38
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1
Query: 505 QPGHLTSMK*ELGCGTSRLSLCFLLSDAGEGCNKS 401
QPGHLTS K +LG T+ +LCFL S+A GCNKS
Sbjct: 4 QPGHLTSRKYDLGPWTNVFNLCFLASEAAVGCNKS 38
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 459 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
VP P S F+ ++C C T V+S A+ V C C +L P GG+A
Sbjct: 8 VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKA 54
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +3
Query: 480 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
F +V+CP C TVF A V CA C T L PTGG A
Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEA 44
>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Pyrococcus furiosus
Length = 63
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +3
Query: 450 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGR 596
K ++P P S F+ VKC C VFSH V C C L PTGG+
Sbjct: 3 KPIIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
kandleri
Length = 73
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +3
Query: 456 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
LVP P S F+ V+C C +F +A V C C L PTGG+A
Sbjct: 15 LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKA 62
>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S27E - Candidatus Nitrosopumilus maritimus SCM1
Length = 65
Score = 42.7 bits (96), Expect = 0.006
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 459 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
+P P+S F V C C ++ V+SHA V C C + TG +A
Sbjct: 8 IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKA 54
>UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:
LRRGT00168 - Rattus norvegicus (Rat)
Length = 109
Score = 42.3 bits (95), Expect = 0.008
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 408 LHPSPASERRKHKLKRLVPHPNSYFMD 488
LHP P E+RK+K KRLV PNSYF++
Sbjct: 13 LHPCPEEEKRKYKKKRLVQSPNSYFVE 39
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 480 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGGRA 599
F ++CP C +F A VV CA C T L PTGG A
Sbjct: 5 FYQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein S27 - Homo sapiens
Length = 83
Score = 41.1 bits (92), Expect = 0.019
Identities = 25/57 (43%), Positives = 28/57 (49%)
Frame = +3
Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGC 563
L DL HP +RR KRLV + Y MDVKC GC K V+ VV C C
Sbjct: 3 LTKDLPHPL---QRRSGNKKRLVQSQDCYVMDVKCSGCPKAAVVWEFC--VVDCPAC 54
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 40.3 bits (90), Expect = 0.034
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = -3
Query: 593 ATSGXTKDR*ASSADHHSLCVTKNCCNLVTARALNIHEI 477
AT T+DR S +++LC+T++ C+LV RAL++H++
Sbjct: 16 ATCWLTQDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54
>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S27e -
Thermoplasma acidophilum
Length = 65
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 471 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCXPTGG 593
N +F+ +KC C + VF+ V C C + PTGG
Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>UniRef50_Q8ILE0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1585
Score = 34.3 bits (75), Expect = 2.2
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -3
Query: 332 HLN*FFIS*LLYFQVQISILYYSTDVFYDLQYIYVN*SIASDILCHVYFSVSNRIYLNLH 153
+LN I+ L YF++ I I +S FY QYI+ N +I + +L +Y N I
Sbjct: 1427 YLNYILITFLTYFKINIPIFIFS--FFYQSQYIH-NKNILNSLLIFIYILTQNYILTPFP 1483
Query: 152 SI 147
SI
Sbjct: 1484 SI 1485
>UniRef50_Q9G8P4 Cluster: ABC transporter subunit; n=1; Naegleria
gruberi|Rep: ABC transporter subunit - Naegleria gruberi
Length = 210
Score = 33.9 bits (74), Expect = 2.9
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = -3
Query: 338 FLHLN*FFIS*LLYFQVQISILYYSTDVFYDLQYIYVN*SIASDILCHVYFSV------- 180
FL + F++ +L+F IS+ YYS ++ + Y++++ I S IL + F +
Sbjct: 7 FLKVYFFYLLLVLFFYFYISLDYYSKFIYNYILYLHISFIIISYILFFIIFIIYVSYIYS 66
Query: 179 SNRIYLNLHSIPLSNLYYCINI 114
N I +N+ SI + + +Y + I
Sbjct: 67 INIININISSIGIFSSFYTLFI 88
>UniRef50_Q332L3 Cluster: Putative uncharacterized protein; n=1;
Clostridium phage c-st|Rep: Putative uncharacterized
protein - Clostridium botulinum C bacteriophage
Length = 496
Score = 32.3 bits (70), Expect = 9.0
Identities = 11/58 (18%), Positives = 32/58 (55%)
Frame = -3
Query: 290 VQISILYYSTDVFYDLQYIYVN*SIASDILCHVYFSVSNRIYLNLHSIPLSNLYYCIN 117
+ + L + D+ + YI++N ++ S + + ++N+I +++ + +N+ C+N
Sbjct: 433 ISVDALNFDVDILKNADYIFLNVNVLSHAMYYKVTEITNKINKDIYFLNNNNIDICLN 490
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,272,419
Number of Sequences: 1657284
Number of extensions: 9046136
Number of successful extensions: 17809
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17788
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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