Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d10f
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.069
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.069
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 259 MYFTICSIFM*INQLLLTFYAMCTFQCLTVFI*TCTQYRYLIYTIVLILAHAY 101
           + F +CS +  ++   L FY  C F   TV    CT Y Y  + I+L + + Y
Sbjct: 70  LLFLLCSGYFTVH---LLFY--CPFIIFTVHFLLCTYYFYYAFIILLCVYYFY 117


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 299 YFQVQISILYYSTDVFYDLQYIYV 228
           YFQ+ +SI  YS+ V Y  QY+ +
Sbjct: 134 YFQLVLSISVYSSSVGY-TQYVRI 156


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 502 AVTRLQQFLVTHREWWSALDAQRSFV 579
           AVT +   L+ ++E WS+L+    F+
Sbjct: 31  AVTIILSSLIFNQEQWSSLNKNFQFI 56


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 203 LCHVYFSVSNRI-YLNLHSIPLSNLYYCI 120
           LCH+ F +  ++ Y+ L S  L+N Y+ I
Sbjct: 274 LCHLCFLLDEKLSYIILTSF-LNNFYFII 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,687
Number of Sequences: 336
Number of extensions: 2856
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)