Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d10f
         (601 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...   129   6e-30
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.    129   6e-30
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...   129   6e-30
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...   129   6e-30
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...   129   6e-30
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...   129   6e-30
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...   127   3e-29
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.      125   1e-28
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...   124   3e-28
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    69   2e-11

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  129 bits (312), Expect = 6e-30
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 573 LCXPTGGRA 599
           LC PTGG+A
Sbjct: 63  LCQPTGGKA 71


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score =  129 bits (312), Expect = 6e-30
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 573 LCXPTGGRA 599
           LC PTGG+A
Sbjct: 63  LCQPTGGKA 71


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  129 bits (312), Expect = 6e-30
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 573 LCXPTGGRA 599
           LC PTGG+A
Sbjct: 63  LCQPTGGKA 71


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  129 bits (312), Expect = 6e-30
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 573 LCXPTGGRA 599
           LC PTGG+A
Sbjct: 63  LCQPTGGKA 71


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  129 bits (312), Expect = 6e-30
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 573 LCXPTGGRA 599
           LC PTGG+A
Sbjct: 63  LCQPTGGKA 71


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  129 bits (312), Expect = 6e-30
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 573 LCXPTGGRA 599
           LC PTGG+A
Sbjct: 63  LCQPTGGKA 71


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score =  127 bits (307), Expect = 3e-29
 Identities = 54/66 (81%), Positives = 58/66 (87%)
 Frame = +3

Query: 402 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCX 581
           DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LC 
Sbjct: 1   DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60

Query: 582 PTGGRA 599
           PTGG+A
Sbjct: 61  PTGGKA 66


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score =  125 bits (302), Expect = 1e-28
 Identities = 55/74 (74%), Positives = 60/74 (81%)
 Frame = +3

Query: 378 CLHF*LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCA 557
           C    LA DLLHPS   E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C 
Sbjct: 14  CFFVQLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCV 73

Query: 558 GCSTILCXPTGGRA 599
           GCST+LC PTGG+A
Sbjct: 74  GCSTVLCQPTGGKA 87


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score =  124 bits (298), Expect = 3e-28
 Identities = 54/69 (78%), Positives = 59/69 (85%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 572
           LA DLLHPS   E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 3   LARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 62

Query: 573 LCXPTGGRA 599
           LC PTGG+A
Sbjct: 63  LCQPTGGKA 71


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 68.5 bits (160), Expect = 2e-11
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = +3

Query: 393 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 503
           LA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPG
Sbjct: 3   LAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,919,208
Number of Sequences: 237096
Number of extensions: 1461071
Number of successful extensions: 3539
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3537
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)