Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d09r
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 91 8e-19
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 7e-17
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 70 2e-12
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 52 6e-07
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 48 6e-06
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 29 4.9
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 29 4.9
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 28 6.5
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 28 8.6
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 91.1 bits (216), Expect = 8e-19
Identities = 63/181 (34%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Frame = -2
Query: 655 WSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIVGFNLGAHVAGVTGRNL 488
W + ++ AV VG+ A L+ L+ L VH++GF+ GAHVAG GR +
Sbjct: 151 WMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSFGAHVAGYVGRRM 210
Query: 487 EGK---VARITGLDPSARDW---ENNVLRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHI 326
+ + + RIT LDP+A W + +RL T+DA +V+VIHT G+ IGH
Sbjct: 211 KKRGRMIDRITALDPAAM-WFHKHHEDVRLDTSDALFVDVIHTSAD----YGITSTIGHA 265
Query: 325 DFFVNGRLVQPGCTN--------NLCSHNRAYEVFAATI-THGKHYGNQCSTEAEITANN 173
DF+ NG QPGC N C H RA +F ++ T Y C +E + + N
Sbjct: 266 DFYPNGGKKQPGCDNFFRGFSSYLFCGHKRAPALFTTSLYTKTPLYSYPCRSEDDFNSGN 325
Query: 172 C 170
C
Sbjct: 326 C 326
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 84.6 bits (200), Expect = 7e-17
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 17/159 (10%)
Frame = -2
Query: 655 WSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HIVGFNLGAHVAGVTGRNL 488
WS + Y A VG+ I +K L ++VGF+LGAH++G GR +
Sbjct: 649 WSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVGFSLGAHISGYVGRRI 708
Query: 487 E---GKVARITGLDPSARDWEN-NV-LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHID 323
K+ RITGLDP++ + N +V +RL +DA +V+V+HTD ++ G GHID
Sbjct: 709 AKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD---MDLAGTPTVSGHID 765
Query: 322 FFVNGRLVQPGCTNNL--------CSHNRAYEVFAATIT 230
F+ NG QPGC + L C H RA E +A ++T
Sbjct: 766 FYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVT 804
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 70.1 bits (164), Expect = 2e-12
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Frame = -2
Query: 655 WSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VHIVGFNLGAHVAGVTGRN 491
W + Y AV VG+ +A F+K L L ++ H +GF+LGAH++G G+
Sbjct: 132 WIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSIGFSLGAHISGYVGQR 191
Query: 490 LE--GK-VARITGLDPSARDWENNV--LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHI 326
L+ G+ + RITGLDP+ ++ +RL DAQ+V+VIHT G+ GH+
Sbjct: 192 LKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTS----YVFGITAPHGHM 247
Query: 325 DFFVNGRLVQPGCT 284
DF+ NG Q GC+
Sbjct: 248 DFYPNGGTSQRGCS 261
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 51.6 bits (118), Expect = 6e-07
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Frame = -2
Query: 460 LDPSARDWENNVL--RLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGC 287
LDP+ + N + RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGC 58
Query: 286 -------TNNL-CSHNRAYEVFAATIT 230
+N L C H RA++ F +IT
Sbjct: 59 RDIADGPSNALKCDHVRAHDYFTESIT 85
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -2
Query: 640 LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIVGFNLGAHVAGVTGRNLEGKVA 473
L+ Y A VG+ +A + ++ L +VH++G +LGAHVAG G L GKV
Sbjct: 68 LNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGERLSGKVG 127
Query: 472 RIT 464
RIT
Sbjct: 128 RIT 130
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = -2
Query: 424 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAI-GHID-FFVNGRLVQPGCTNNLCSHNRAYE 251
+ + +++ ++ + SG + + HID +NG +V PG + Y
Sbjct: 1 MSMSSDEVNFLVYRYLQESGFQHSAFTFGVESHIDQSSINGSVVPPGALVTILQKGVQYV 60
Query: 250 VFAATITHGKHYGNQCSTEAEITANN-CRG 164
AT+T G Y EAE T CRG
Sbjct: 61 EAEATVTEGVQY-----VEAEATVTEVCRG 85
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = -2
Query: 541 IVGFNLGAHVAGVTG---RNLEG-KVARITG 461
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 589 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 449
+ +FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 166
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 325 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 191
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 358 KNGLGIAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 257
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 580 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 449
FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 44
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 291 PGWTRRPLTKKSMC-PIAMPKPFLLTPDPSV*ITSTY*ASFVPSRSTLFSQSRAEGSRP 464
P +P+ +C P+ P P +++P P I + + VP+ TL QS A P
Sbjct: 193 PSPASQPVAPSPVCIPVQSPAPNMMSPSPQQFIAQSPAPTSVPTPGTLNVQSPASILNP 251
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 15 VETNFIGHHRKLRFKFCRHHKWN 83
VE NF+GH R+ R CR K N
Sbjct: 233 VERNFVGHRRRCRRVVCRATKSN 255
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 40 TENFVLSFVGITNGMGTSCRYLLGTFQTHALQ-VWQYPFQ--LEILGNYLRLS 189
+E FV +TN M T+C+ + H + VW+Y +E LGN +RL+
Sbjct: 394 SERMTALFVKVTNQMITACKNYI---TEHGYKNVWEYTHSELIEKLGNCIRLN 443
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,779,412
Number of Sequences: 59808
Number of extensions: 466378
Number of successful extensions: 1265
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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