Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d08r
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p pro...   140   2e-33
AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-P...   140   2e-33
AY119641-1|AAM50295.1|  581|Drosophila melanogaster RE44178p pro...    30   2.6  
AF195242-1|AAF63250.1|  581|Drosophila melanogaster FRIZZLED 3 p...    30   2.6  
AE014298-105|AAF45547.1|  581|Drosophila melanogaster CG16785-PA...    30   2.6  
AB018565-1|BAA84677.1|  581|Drosophila melanogaster Dfrizzled-3 ...    30   2.6  

>BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p
           protein.
          Length = 373

 Score =  140 bits (338), Expect = 2e-33
 Identities = 82/209 (39%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
 Frame = -1

Query: 689 TLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFXERVSRXXXXXXXXXXXXXXXASLT 510
           ++ S +S+WKVPVSYAHTVKAT PL+T  L RV F E+                  A++T
Sbjct: 92  SVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVT 151

Query: 509 ELQFDXXXXXXXXXXXXXXXLQHLYSKRALQDSGVHHXXXXXXXXXXXLVPMAPLWLVRD 330
           E+ FD               +Q+++SK+ L+D+ +HH           L    PLWL  D
Sbjct: 152 EISFDMMGLISALISTMGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMD 211

Query: 329 AGAVLRAQVAWN---RAGPLLLADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXX 159
           + AV R     N   R   LL ADGVL WLQ + AFSVLS V+PLTY             
Sbjct: 212 SFAVFRHTAIKNLDYRVIALLFADGVLNWLQNIIAFSVLSLVTPLTYAVASASKRIFVIA 271

Query: 158 XSLVVLRNPAPPLNVVGMSVAVLGVLAYD 72
            SL++L NP   +N VGM++A++GVL Y+
Sbjct: 272 VSLLILGNPVTWVNCVGMTLAIVGVLCYN 300


>AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-PA
           protein.
          Length = 373

 Score =  140 bits (338), Expect = 2e-33
 Identities = 82/209 (39%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
 Frame = -1

Query: 689 TLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFXERVSRXXXXXXXXXXXXXXXASLT 510
           ++ S +S+WKVPVSYAHTVKAT PL+T  L RV F E+                  A++T
Sbjct: 92  SVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVT 151

Query: 509 ELQFDXXXXXXXXXXXXXXXLQHLYSKRALQDSGVHHXXXXXXXXXXXLVPMAPLWLVRD 330
           E+ FD               +Q+++SK+ L+D+ +HH           L    PLWL  D
Sbjct: 152 EISFDMMGLISALISTMGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMD 211

Query: 329 AGAVLRAQVAWN---RAGPLLLADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXX 159
           + AV R     N   R   LL ADGVL WLQ + AFSVLS V+PLTY             
Sbjct: 212 SFAVFRHTAIKNLDYRVIALLFADGVLNWLQNIIAFSVLSLVTPLTYAVASASKRIFVIA 271

Query: 158 XSLVVLRNPAPPLNVVGMSVAVLGVLAYD 72
            SL++L NP   +N VGM++A++GVL Y+
Sbjct: 272 VSLLILGNPVTWVNCVGMTLAIVGVLCYN 300


>AY119641-1|AAM50295.1|  581|Drosophila melanogaster RE44178p
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 298 HATWARSTAPASRTNHNGAIGTSARPDNV 384
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


>AF195242-1|AAF63250.1|  581|Drosophila melanogaster FRIZZLED 3
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 298 HATWARSTAPASRTNHNGAIGTSARPDNV 384
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


>AE014298-105|AAF45547.1|  581|Drosophila melanogaster CG16785-PA
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 298 HATWARSTAPASRTNHNGAIGTSARPDNV 384
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


>AB018565-1|BAA84677.1|  581|Drosophila melanogaster Dfrizzled-3
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 298 HATWARSTAPASRTNHNGAIGTSARPDNV 384
           H TWA +T  A+   HNG + + A P+ +
Sbjct: 10  HLTWAVATIAANGAGHNGPVASGAGPNGL 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.125    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,814,540
Number of Sequences: 53049
Number of extensions: 148547
Number of successful extensions: 537
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)