Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d08f
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    29   0.040
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.49 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.1  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 0.040
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 215 GTSGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMT 346
           G + + + TL V F   +WY+ S++++ VG  A T +  P T +
Sbjct: 235 GGASASKVTLSVPFYGHSWYLQSTSNHDVGAPATTGIAGPFTQS 278


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 596 TRAPQTVREPAPPSREESSLSLC 528
           T+ P + + PAPPSR+ ++ +LC
Sbjct: 401 TQKPSSTKAPAPPSRDLTT-TLC 422


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 362 HTAVPLS*LVEMVALLMPVCP--RHYWLNLTYTTLRTG 255
           H  + LS  ++ VA    V    RHY++N+T+  L  G
Sbjct: 475 HLLMELSRAIDSVACSKTVSDGIRHYYVNVTFPHLFNG 512


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 440 GSNSSSAIASNVLHTG 393
           GSN+SS ++ N L+TG
Sbjct: 241 GSNTSSMLSLNCLNTG 256


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 440 GSNSSSAIASNVLHTG 393
           GSN+SS ++ N L+TG
Sbjct: 30  GSNTSSMLSLNCLNTG 45


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 440 GSNSSSAIASNVLHTG 393
           GSN+SS ++ N L+TG
Sbjct: 30  GSNTSSMLSLNCLNTG 45


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 50  YNII*ASLITKNVYVTQN 103
           YNI+  SL    VY+T N
Sbjct: 47  YNIVAVSLTAYMVYITTN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,404
Number of Sequences: 336
Number of extensions: 3328
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)