Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d08f
(602 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716... 57 1e-08
08_01_0577 + 5132876-5132894,5134352-5134845,5134937-5135162,513... 54 9e-08
05_03_0110 + 8500204-8500460,8502544-8502612,8502725-8502790,850... 54 1e-07
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 47 3e-07
07_03_0649 - 20260501-20260512,20260620-20260833,20261207-202614... 48 4e-06
07_03_0644 - 20242283-20242294,20242402-20242615,20242989-202432... 48 4e-06
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419... 43 2e-04
08_02_0305 + 15586044-15586073,15586846-15586968,15587060-155872... 42 3e-04
08_01_0035 - 262750-262962,263046-263277,263420-263627,263762-26... 32 0.30
04_04_1697 - 35454337-35454576,35454657-35454888,35455045-354552... 32 0.30
07_03_0105 + 13455906-13457198 31 0.70
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 30 1.2
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 30 1.2
05_01_0165 - 1139271-1139417,1139549-1139777,1139889-1139992,114... 30 1.6
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 29 2.1
03_02_0611 + 9842550-9843035,9844313-9844416,9844586-9844814,984... 29 2.1
05_05_0051 + 21923402-21923763,21923861-21923951,21924048-219241... 29 2.8
04_04_0232 + 23794109-23794399,23795290-23796621 29 3.7
01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548,771... 29 3.7
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 28 5.0
08_02_1420 + 26942777-26942905,26944415-26944511,26944596-269449... 28 5.0
12_01_0654 - 5542349-5542480,5542491-5542666,5542835-5542937,554... 28 6.5
01_07_0359 - 43042675-43042758,43042956-43043024,43043099-430431... 28 6.5
08_01_0380 - 3376475-3377116,3377722-3377919,3378381-3378556,337... 27 8.7
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 27 8.7
>09_02_0312 -
7168332-7168408,7168492-7168621,7168793-7168861,
7168947-7169066,7169356-7169440,7169565-7169650,
7169762-7169914,7170008-7170130,7170974-7171357
Length = 408
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/122 (27%), Positives = 56/122 (45%)
Frame = +2
Query: 224 GSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXG 403
G +TL +G L WY+ + N+ K L P+P+ +T VQ G
Sbjct: 100 GGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWIT-G 158
Query: 404 VRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLF 583
+ + ++PLA+ + L + +S+ KV VS+ HT+KA P ++ L+ +
Sbjct: 159 ILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFL 218
Query: 584 GE 589
GE
Sbjct: 219 GE 220
>08_01_0577 +
5132876-5132894,5134352-5134845,5134937-5135162,
5135695-5135917,5136315-5136528,5136769-5136806,
5136977-5137142
Length = 459
Score = 54.0 bits (124), Expect = 9e-08
Identities = 29/118 (24%), Positives = 55/118 (46%)
Frame = +2
Query: 236 ETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRST 415
+ L + A W+ L+ N+ K L P+P + + V +
Sbjct: 100 QKLKISIYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLACGSAMMLVSWATRLVEAP 159
Query: 416 RWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 589
+ ++W +VL P+A+A + + + VS+ KV VS+ H +K+ P ++ ++R L GE
Sbjct: 160 KTDLDFW-KVLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSAEPAFSVLVSRFLLGE 216
>05_03_0110 +
8500204-8500460,8502544-8502612,8502725-8502790,
8502885-8502963,8504270-8504390,8504486-8504581,
8505403-8505515,8505612-8505689,8507777-8507893,
8508194-8508293,8508463-8508563,8509093-8509110
Length = 404
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = +2
Query: 230 RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVR 409
R L+ GF WY L+ N++ K P+P +V G+
Sbjct: 96 RYPALVTGFFFFMWYFLNVIFNILNKKIFDYFPYPY-FVSVSHLLVGVLYCLVGWSFGLP 154
Query: 410 STRWPTNYWT-RVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFG 586
R P N ++L P+A+ + + S VS V VS+AHT+KA P + A ++ + G
Sbjct: 155 K-RAPINSTVLKLLFPVAVCHAIGHVTSTVSFAAVAVSFAHTIKALEPFFNAAASQFILG 213
Query: 587 ERV 595
++V
Sbjct: 214 QQV 216
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 46.8 bits (106), Expect(2) = 3e-07
Identities = 30/95 (31%), Positives = 45/95 (47%)
Frame = +2
Query: 314 LTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQ 493
L LPFP T+TA Q + R + ++ PLA +L T+ +
Sbjct: 143 LQPLPFPYTITAFQLAFGSFVIFLMWALKLHPAPRISISQLAKI-APLAAGHMLGTVFTN 201
Query: 494 VSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 598
+S+ KV VS+ HT+KA+ P +T L+ GE S
Sbjct: 202 MSLSKVAVSFTHTIKASEPFFTVLLSAFFLGETPS 236
Score = 25.0 bits (52), Expect(2) = 3e-07
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 GSRRETLIVGFLCAAWYMLSSASNVVGK 307
G+ ET +G + AWY+L+ N+ K
Sbjct: 87 GALAETAQLGAMIVAWYLLNIYFNIYNK 114
>07_03_0649 -
20260501-20260512,20260620-20260833,20261207-20261429,
20261706-20261931,20262051-20262494
Length = 372
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/114 (23%), Positives = 50/114 (43%)
Frame = +2
Query: 248 VGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPT 427
+G A W+ L+ N+ K L P+P + + +
Sbjct: 81 IGVYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLAAGSAIMLASWATRIAEAPATDL 140
Query: 428 NYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 589
++W + L P+AIA + + + VS+ KV VS+ H +K+ P ++ ++R GE
Sbjct: 141 DFW-KALSPVAIAHTIGHVAATVSMAKVAVSFTHIIKSGEPAFSVLVSRFFLGE 193
>07_03_0644 -
20242283-20242294,20242402-20242615,20242989-20243211,
20243488-20243713,20243833-20244276
Length = 372
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/114 (23%), Positives = 50/114 (43%)
Frame = +2
Query: 248 VGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPT 427
+G A W+ L+ N+ K L P+P + + +
Sbjct: 81 IGVYFATWWALNVIFNIYNKKVLNAFPYPWLTSTLSLAAGSAIMLASWATRIAEAPATDL 140
Query: 428 NYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 589
++W + L P+AIA + + + VS+ KV VS+ H +K+ P ++ ++R GE
Sbjct: 141 DFW-KALSPVAIAHTIGHVAATVSMAKVAVSFTHIIKSGEPAFSVLVSRFFLGE 193
>05_01_0502 +
4191443-4191769,4191770-4191892,4194161-4194313,
4194420-4194505,4194648-4194732,4194871-4194990,
4195066-4195134,4195351-4195506
Length = 372
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/99 (27%), Positives = 44/99 (44%)
Frame = +2
Query: 302 GKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTT 481
G L +PFP T+T Q R + ++L PLA+ +
Sbjct: 107 GLQVLKSVPFPYTITTFQFASGSFFITLMWLLNLHPKPRLSLGQYAKIL-PLALVHTMGN 165
Query: 482 LCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 598
+ + +S+ KV VS+ HT+KA P ++ L+ + GE S
Sbjct: 166 VFTNMSLGKVAVSFTHTIKAMEPFFSVLLSVLFLGETPS 204
>08_02_0305 +
15586044-15586073,15586846-15586968,15587060-15587212,
15587313-15587398,15588327-15588411,15588796-15588864,
15589261-15589326
Length = 203
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/94 (26%), Positives = 43/94 (45%)
Frame = +2
Query: 308 LALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLC 487
+ L P+P+ +T VQ +R + +L PLA+ + L
Sbjct: 10 MVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKISGAQLFAIL-PLAVVHTMGNLF 68
Query: 488 SQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 589
+ +S+ KV VS+ HT+KA P ++ L+ + GE
Sbjct: 69 TNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGE 102
>08_01_0035 -
262750-262962,263046-263277,263420-263627,263762-264011,
265232-265342
Length = 337
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 422 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWT 559
P + W R+ P++ + + VS+ +PVS+ T+K+ TP T
Sbjct: 76 PEDRWRRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 120
>04_04_1697 -
35454337-35454576,35454657-35454888,35455045-35455252,
35455380-35455629,35456232-35456354
Length = 350
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 422 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWT 559
P + W R+ P++ + + VS+ +PVS+ T+K+ TP T
Sbjct: 80 PEDRWRRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 124
>07_03_0105 + 13455906-13457198
Length = 430
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -1
Query: 593 RAPQTVREPAPPSREESSLSLCGHRRLALSK 501
RAP+ V P+P +R+ +++S+C RLA+ +
Sbjct: 145 RAPKVVFSPSPTARDFAAVSMCRPNRLAVQR 175
>11_06_0223 -
21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 491 QVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 598
Q++I K+PV Y H P WT G+A +L VS
Sbjct: 625 QLTIKKLPVFYKHRDFLFFPAWTFGVANILLKVPVS 660
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 573 RASPAVQRGVVAFTVWA*ETGTFQMETCEHSVVRSLAIAKGTKTRVQ*FVGHR 415
R P GV AF W+ ++ +F + +C+ R L + KG + FVGHR
Sbjct: 136 RTIPGFAAGVTAFD-WSPDS-SFLLASCKDLTARLLPVKKGLGGKPFLFVGHR 186
>05_01_0165 -
1139271-1139417,1139549-1139777,1139889-1139992,
1140097-1140639
Length = 340
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 476 TTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGER 592
+ + VS+ +PVS+ V ATTP +TA LA + R
Sbjct: 122 SVVAGNVSLRYLPVSFNQAVGATTPFFTAVLAYAVAARR 160
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 337 NYDSGTAVCSGLAECTRASPVWSTFDAMADELLDPCLSTLGDRQTSYHTVLASFHLESAS 516
NY+SG AV L + + S STFD A + D L R+ Y +E A
Sbjct: 500 NYNSGNAVAYALLDGNKQSAFLSTFDKSAFKSSDKLLLAYKPRRGRYAVYDNEVTMEEAE 559
Query: 517 LL 522
L
Sbjct: 560 SL 561
>03_02_0611 +
9842550-9843035,9844313-9844416,9844586-9844814,
9846121-9846270
Length = 322
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 476 TTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 598
+ + VS+ +PVS+ V ATTP +TA A ++ +R S
Sbjct: 103 SVVSGNVSLRYLPVSFNQAVGATTPFFTAVFAYIMTVKRES 143
>05_05_0051 +
21923402-21923763,21923861-21923951,21924048-21924196,
21924279-21924522,21924664-21924768,21924842-21925024,
21925118-21925319,21925896-21926372,21926680-21926771,
21927265-21927444
Length = 694
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/110 (23%), Positives = 44/110 (40%)
Frame = -3
Query: 483 SVVRSLAIAKGTKTRVQ*FVGHRVERTPHRASAGTLSEAAAHSCTAVIVSGNGSSVNASL 304
+V +SL + K K + + F+ + AGT S+ + C ++ NG S ++
Sbjct: 387 AVRKSLVLLKNGKNQKEPFLP-LAKNVKRILVAGTHSDNIGYQCGGWTIAWNGDSGRITI 445
Query: 303 PTTLLAELNIYHAAHRKPTISVSRLEPLVPIALFFYQKVL*SKVSITESL 154
TT+L + A + E V F Y V+ +V E L
Sbjct: 446 GTTILEAIKESVGAETEVVYEECPTEATVETGEFSYAVVVVGEVPYAEWL 495
>04_04_0232 + 23794109-23794399,23795290-23796621
Length = 540
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 590 APQTVREPAPPSREESSLSLCGHRRLALSK 501
AP+ V P P +R+ +++S+C RLA+ +
Sbjct: 256 APKVVFSPCPTARDLAAVSICRPNRLAVQR 285
>01_01_0977 -
7717808-7717837,7718227-7718327,7718449-7718548,
7718706-7718822,7718913-7718990,7719980-7720058,
7720184-7720249,7720373-7720441,7720890-7721188
Length = 312
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 242 LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAV 352
LI GF WY L+ N++ K P+P ++ +
Sbjct: 114 LITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVI 150
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -3
Query: 414 VERTPHRASAGTLSEAAAHSCTAVIVSGNGSSVNASLPTTLLAELNIYHAAHRKPTISVS 235
+E TP R S+G + A+ + A GSS+ SL + HR + S
Sbjct: 281 IELTPERRSSGVKRQLASGTSLAKKPRSQGSSITCSLCKVTMTSPRAL-VEHRASLLHRS 339
Query: 234 RLEPL 220
L PL
Sbjct: 340 NLAPL 344
>08_02_1420 +
26942777-26942905,26944415-26944511,26944596-26944962,
26945286-26945793
Length = 366
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 466 QTSYHTVLASFHLESASLLCPH 531
QTSYHTV + S+SL+CP+
Sbjct: 73 QTSYHTVGDHSNAASSSLVCPY 94
>12_01_0654 -
5542349-5542480,5542491-5542666,5542835-5542937,
5542971-5543084,5543104-5543163,5543258-5544316
Length = 547
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 325 TISTNYDSGTAVCSGLAECTRASPVWSTFDAMADEL 432
++STN+++ T + + T + P + T+DA+ + L
Sbjct: 262 SVSTNFNAETLISKIIQSVTLSKPSFDTYDALQEHL 297
>01_07_0359 - 43042675-43042758,43042956-43043024,43043099-43043159,
43043260-43043768,43044545-43045153,43045697-43045972,
43046581-43046769,43047006-43047116,43047621-43047908,
43047990-43048041,43048648-43048824,43049249-43049314,
43049675-43049929,43050071-43050577,43050807-43050886,
43050974-43051207
Length = 1188
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 321 SVNASLPTTLLAELNIYHAAHRKPTISVSRLEPLVPIALFFY 196
SVN + TTLL+E ++ R I+ +L VP +LFF+
Sbjct: 1014 SVNQTAQTTLLSETSMAALLLRGLAIAPMQLVARVPTSLFFW 1055
>08_01_0380 -
3376475-3377116,3377722-3377919,3378381-3378556,
3378681-3379703,3380476-3380593
Length = 718
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 408 RTPHRASAGTLSEAAAHSCTAVIVSGNGSSVNASL-PTTLLAE 283
R PH SA S A + + GNG +VN S+ PT +L++
Sbjct: 453 RAPHSQSAVLKSYAGDYRGSCTTNGGNGITVNKSVGPTRVLSD 495
>04_04_1694 -
35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = -3
Query: 414 VERTPHRASAGTLSE---AAAHSCTAVIVSGNGSSVNASLPTTL--LAELNIYH 268
++ TP + SAG AAA CTA+ S + S V LP+ + LA+ + +H
Sbjct: 196 MQPTPPQHSAGPPPPPPPAAAGMCTALAASSSNSGVEDPLPSYMEALADFSDFH 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,813,929
Number of Sequences: 37544
Number of extensions: 345677
Number of successful extensions: 1070
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -