Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d08f
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456351-1|CAG30237.1|  350|Homo sapiens Em:AC005006.4 protein.        36   0.083
BC107119-1|AAI07120.1|  350|Homo sapiens solute carrier family 3...    36   0.083
BC093099-1|AAH93099.1|  234|Homo sapiens SLC35E4 protein protein.      36   0.083
BC040191-1|AAH40191.1|  350|Homo sapiens solute carrier family 3...    36   0.083

>CR456351-1|CAG30237.1|  350|Homo sapiens Em:AC005006.4 protein.
          Length = 350

 Score = 36.3 bits (80), Expect = 0.083
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 407 RSTRWPTNYWTRVLVPLAIAKLLTTL-CSQVSIWKVPVSYAHTVKATTPLWTAGLARVLF 583
           R  R P    TR  V L      T++ C  V +  VP+  A  V  TTPL+T  L+ +L 
Sbjct: 96  RGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLL 155

Query: 584 GER 592
           G R
Sbjct: 156 GRR 158


>BC107119-1|AAI07120.1|  350|Homo sapiens solute carrier family 35,
           member E4 protein.
          Length = 350

 Score = 36.3 bits (80), Expect = 0.083
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 407 RSTRWPTNYWTRVLVPLAIAKLLTTL-CSQVSIWKVPVSYAHTVKATTPLWTAGLARVLF 583
           R  R P    TR  V L      T++ C  V +  VP+  A  V  TTPL+T  L+ +L 
Sbjct: 96  RGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLL 155

Query: 584 GER 592
           G R
Sbjct: 156 GRR 158


>BC093099-1|AAH93099.1|  234|Homo sapiens SLC35E4 protein protein.
          Length = 234

 Score = 36.3 bits (80), Expect = 0.083
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 407 RSTRWPTNYWTRVLVPLAIAKLLTTL-CSQVSIWKVPVSYAHTVKATTPLWTAGLARVLF 583
           R  R P    TR  V L      T++ C  V +  VP+  A  V  TTPL+T  L+ +L 
Sbjct: 96  RGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLL 155

Query: 584 GER 592
           G R
Sbjct: 156 GRR 158


>BC040191-1|AAH40191.1|  350|Homo sapiens solute carrier family 35,
           member E4 protein.
          Length = 350

 Score = 36.3 bits (80), Expect = 0.083
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 407 RSTRWPTNYWTRVLVPLAIAKLLTTL-CSQVSIWKVPVSYAHTVKATTPLWTAGLARVLF 583
           R  R P    TR  V L      T++ C  V +  VP+  A  V  TTPL+T  L+ +L 
Sbjct: 96  RGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLL 155

Query: 584 GER 592
           G R
Sbjct: 156 GRR 158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,837,617
Number of Sequences: 237096
Number of extensions: 2040350
Number of successful extensions: 7790
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7790
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)