Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d08f
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 538 FHCVGIGDWHFPNGNLRAQCG 476
           F C G G W+ P+G    + G
Sbjct: 232 FLCKGDGKWYLPSGGCHCKPG 252


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 118 YGIIMNY*IKDLQ*FCDRNFALEYFLIKKKRNGY 219
           Y +  NY  K+++ + D  + L+YF+   + N Y
Sbjct: 200 YIVNTNYSSKNMREYNDPEYKLDYFMEDVELNAY 233


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 602 RETRAPQTVREPAPPSREESSLSLCGHRRLALSKWKLAST 483
           ++ R P T  +  P   EE+S S  G   L +  +K AST
Sbjct: 853 QQQRGPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPAST 892


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 342 IVSGNGSSVNASL 304
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 342 IVSGNGSSVNASL 304
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 506 SKWKLASTVW*EVWRSPRVL 447
           ++W L +T W +VWRS  VL
Sbjct: 110 NRW-LFTTDWCDVWRSLDVL 128


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 118 YGIIMNY*IKDLQ*FCDRNFALEYFLIKKKRNGY 219
           Y +  NY  K ++ + D  + L+YF+   + N Y
Sbjct: 200 YIVNTNYSSKYMREYNDPEYKLDYFMEDVELNAY 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,837
Number of Sequences: 438
Number of extensions: 3941
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)