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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d08f
         (602 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g01550.1 68416.m00085 triose phosphate/phosphate translocator...    64   7e-11
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator...    58   4e-09
At5g54800.1 68418.m06826 glucose-6-phosphate/phosphate transloca...    54   6e-08
At5g46110.1 68418.m05669 phosphate/triose-phosphate translocator...    54   1e-07
At1g61800.1 68414.m06969 glucose-6-phosphate/phosphate transloca...    50   1e-06
At5g46110.2 68418.m05670 phosphate/triose-phosphate translocator...    48   5e-06
At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate transloca...    37   0.012
At3g10290.1 68416.m01233 phosphate translocator-related low simi...    33   0.11 
At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate transloca...    33   0.19 
At1g21870.1 68414.m02737 glucose-6-phosphate/phosphate transloca...    33   0.19 
At1g12500.1 68414.m01447 phosphate translocator-related low simi...    31   0.44 
At5g04160.1 68418.m00404 phosphate translocator-related low simi...    31   0.59 
At5g14660.2 68418.m01718 peptide deformylase, chloroplast / poly...    28   4.1  
At5g14660.1 68418.m01717 peptide deformylase, chloroplast / poly...    28   4.1  
At3g11320.1 68416.m01376 phosphate translocator-related low simi...    28   4.1  
At2g45220.1 68415.m05630 pectinesterase family protein contains ...    28   4.1  
At5g05820.1 68418.m00640 phosphate translocator-related low simi...    28   5.5  
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po...    28   5.5  
At4g21630.1 68417.m03135 subtilase family protein contains simil...    27   7.2  
At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein si...    27   7.2  
At5g40820.1 68418.m04956 FAT domain-containing protein / phospha...    27   9.6  
At2g39620.1 68415.m04857 pentatricopeptide (PPR) repeat-containi...    27   9.6  

>At3g01550.1 68416.m00085 triose phosphate/phosphate translocator,
           putative similar to SWISS-PROT:P52178 triose
           phosphate/phosphate translocator [Cauliflower]{Brassica
           oleracea}
          Length = 383

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 40/123 (32%), Positives = 62/123 (50%)
 Frame = +2

Query: 221 SGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXX 400
           SGS  + L +G +   WY+L+   N+  K  L   P+P T+TA Q               
Sbjct: 70  SGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRVYPYPATVTAFQLGCGTLMIAIMWLLK 129

Query: 401 GVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVL 580
                ++  + +T V+V LA+A  L  L + VS+ +V VS+ HT+KA  P +T  L+ +L
Sbjct: 130 LHPRPKFSPSQFT-VIVQLAVAHTLGNLLTNVSLGRVNVSFTHTIKAMEPFFTVLLSVLL 188

Query: 581 FGE 589
            GE
Sbjct: 189 LGE 191


>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
           putative similar to SWISS-PROT:P52178 triose
           phosphate/phosphate translocator [Cauliflower] {Brassica
           oleracea}
          Length = 408

 Score = 58.0 bits (134), Expect = 4e-09
 Identities = 36/124 (29%), Positives = 57/124 (45%)
 Frame = +2

Query: 221 SGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXX 400
           SG   + L +G L A WY+ +   N+  K  L  L  P+T+T VQ               
Sbjct: 99  SGKLTKVLELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITIMWVLN 158

Query: 401 GVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVL 580
             +  +        +L PLA+   L  L + +S+ KV VS+ HT+KA  P ++  L+ + 
Sbjct: 159 LYKRPKISGAQLAAIL-PLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVLLSAMF 217

Query: 581 FGER 592
            GE+
Sbjct: 218 LGEK 221


>At5g54800.1 68418.m06826 glucose-6-phosphate/phosphate
           translocator, putative identical to glucose 6
           phosphate/phosphate translocator [Arabidopsis thaliana]
           gi|7229675|gb|AAF42936
          Length = 388

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 30/128 (23%), Positives = 58/128 (45%)
 Frame = +2

Query: 206 SAMGTSGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXX 385
           +A  T     + L +G   A W+ L+   N+  K  L   P+P   + +           
Sbjct: 83  AAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLI 142

Query: 386 XXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAG 565
                 V + +   ++W + L P+A+A  +  + + VS+ KV VS+ H +K+  P ++  
Sbjct: 143 SWAVGIVETPKTDFDFW-KTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVL 201

Query: 566 LARVLFGE 589
           ++R + GE
Sbjct: 202 VSRFILGE 209


>At5g46110.1 68418.m05669 phosphate/triose-phosphate translocator,
           putative identical to phosphate/triose-phosphate
           translocator precursor [Arabidopsis thaliana]
           gi|3983125|gb|AAC83815; similar to triose
           phosphate/phosphate translocator, chloroplast precursor
           (CTPT)[Cauliflower]{Brassica oleracea} SWISS-PROT:P52177
          Length = 410

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 29/118 (24%), Positives = 52/118 (44%)
 Frame = +2

Query: 242 LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRW 421
           L+ GF    WY L+   N++ K      P+P  ++ +                  +    
Sbjct: 106 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPI 165

Query: 422 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERV 595
            +N   +VL+P+A+   L  + S VS   V VS+ HT+KA  P + A  ++ + G+ +
Sbjct: 166 DSNL-LKVLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSI 222


>At1g61800.1 68414.m06969 glucose-6-phosphate/phosphate
           translocator, putative similar to
           glucose-6-phosphate/phosphate-translocator precursor
           GI:2997591 from [Pisum sativum]
          Length = 388

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 27/118 (22%), Positives = 52/118 (44%)
 Frame = +2

Query: 236 ETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRST 415
           + L +G   A W+ L+   N+  K  L   P+P   + +                   + 
Sbjct: 93  QKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAP 152

Query: 416 RWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 589
           +    +W + L P+A+A  +  + + VS+ KV VS+ H +K+  P ++  ++R   GE
Sbjct: 153 KTDLEFW-KTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGE 209


>At5g46110.2 68418.m05670 phosphate/triose-phosphate translocator,
           putative identical to phosphate/triose-phosphate
           translocator precursor [Arabidopsis thaliana]
           gi|3983125|gb|AAC83815; similar to triose
           phosphate/phosphate translocator, chloroplast precursor
           (CTPT)[Cauliflower]{Brassica oleracea} SWISS-PROT:P52177
          Length = 297

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 26/109 (23%), Positives = 48/109 (44%)
 Frame = +2

Query: 269 WYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVRSTRWPTNYWTRVL 448
           WY L+   N++ K      P+P  ++ +                  +     +N   +VL
Sbjct: 2   WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNL-LKVL 60

Query: 449 VPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERV 595
           +P+A+   L  + S VS   V VS+ HT+KA  P + A  ++ + G+ +
Sbjct: 61  IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSI 109


>At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate
           translocator, putative similar to
           glucose-6-phosphate/phosphate-translocator precursor
           [Solanum tuberosum] gi|2997593|gb|AAC08526
          Length = 417

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 25/117 (21%), Positives = 49/117 (41%)
 Frame = +2

Query: 230 RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXXXXXXXXXXXGVR 409
           + +TL +G +   WY  +   N+  K AL   P+P  + + Q                  
Sbjct: 106 KAKTLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYP 165

Query: 410 STRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVL 580
             +    +   +L P A+   +  + + VS  KV VS+ H +K+  P+++   + +L
Sbjct: 166 CPKISKPFIIALLGP-ALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSLL 221


>At3g10290.1 68416.m01233 phosphate translocator-related low
           similarity to SP|P52178 Triose phosphate/phosphate
           translocator, non-green plastid, chloroplast precursor
           (CTPT) {Brassica oleracea},
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275
          Length = 355

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
 Frame = +2

Query: 200 KKSAMGTSGS--RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQXXXXXX 373
           +KS M +S S  +++TL +  L   WY  +    ++ K  L+   F   +          
Sbjct: 40  QKSDMSSSSSSPKKQTLFISSLIILWYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSAC 99

Query: 374 XXXXXXXXXGVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQV-----SIWKVPVSYAHTVK 538
                     ++    P  Y       L +A L    C+ V     S+  +PVS+   V 
Sbjct: 100 AILSYVSIVFLKLV--PLQYLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVG 157

Query: 539 ATTPLWTAGLARVLFGER 592
           ATTP +TA  A ++  +R
Sbjct: 158 ATTPFFTALFAYIMTFKR 175


>At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate
           translocator-related similar to
           glucose-6-phosphate/phosphate-translocators from
           [Mesembryanthemum crystallinum] GI:9295277, [Solanum
           tuberosum] GI:2997593, [Pisum sativum] GI:2997591;
           contains Pfam profile PF00892: Integral membrane protein
          Length = 336

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 422 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGL 568
           P + W R+  P++    +  +   VS+  +PVS+  T+K+ TP  T  L
Sbjct: 71  PEDRWRRIF-PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVL 118


>At1g21870.1 68414.m02737 glucose-6-phosphate/phosphate
           translocator-related similar to glucose 6
           phosphate/phosphate translocators from Pisum sativum]
           GI:2997591, [Mesembryanthemum crystallinum] GI:9295277,
           [Solanum tuberosum] GI:2997593; contains Pfam profile
           PF00892: Integral membrane protein
          Length = 341

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 422 PTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGL 568
           P + W R+  P++    +  +   +S+  +PVS+  T+K+ TP  T  L
Sbjct: 77  PEDRWRRIF-PMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVL 124


>At1g12500.1 68414.m01447 phosphate translocator-related low
           similarity to glucose-6-phosphate/phosphate-translocator
           precursor [Zea mays] GI:2997589,
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275,
           SP|P21727|CPTR_PEA Triose phosphate/phosphate
           translocator, chloroplast precursor (CTPT) {Pisum
           sativum}
          Length = 361

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 446 LVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTA 562
           ++ L+    L+ +C   S+  +PVS+   + ATTP +TA
Sbjct: 128 ILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTA 166


>At5g04160.1 68418.m00404 phosphate translocator-related low
           similarity to SP|P52178 Triose phosphate/phosphate
           translocator, non-green plastid, chloroplast precursor
           (CTPT) {Brassica oleracea},
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275
          Length = 309

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
 Frame = +2

Query: 218 TSGSRRETLIVGFLCAAWYMLSSASNVVGKLALTE--LPFPLTMTAVQXXXXXXXXXXXX 391
           +S ++++TL +  L  +WY  +    ++ K  L+     FP+ +T               
Sbjct: 2   SSSAKKQTLFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYISI 61

Query: 392 XXXG-VRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGL 568
                V      +      +  L+I    + +   +S+  +PVS+   V ATTP +TA  
Sbjct: 62  VFLKLVPLQHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALF 121

Query: 569 ARVLFGER 592
           A ++  +R
Sbjct: 122 AYLMTFKR 129


>At5g14660.2 68418.m01718 peptide deformylase, chloroplast /
           polypeptide deformylase 1B (PDF1B) identical to
           SP|Q9FUZ2 Peptide deformylase, chloroplast precursor (EC
           3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis
           thaliana}; supporting cDNA
           gi|11320965|gb|AF269165.1|AF269165
          Length = 273

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 437 TRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSR 601
           +R+L+P+ +++  TTL +     K  V++  TV  T+PL ++  A V   +RVSR
Sbjct: 14  SRILLPV-LSRRATTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEV---KRVSR 64


>At5g14660.1 68418.m01717 peptide deformylase, chloroplast /
           polypeptide deformylase 1B (PDF1B) identical to
           SP|Q9FUZ2 Peptide deformylase, chloroplast precursor (EC
           3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis
           thaliana}; supporting cDNA
           gi|11320965|gb|AF269165.1|AF269165
          Length = 273

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 437 TRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSR 601
           +R+L+P+ +++  TTL +     K  V++  TV  T+PL ++  A V   +RVSR
Sbjct: 14  SRILLPV-LSRRATTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEV---KRVSR 64


>At3g11320.1 68416.m01376 phosphate translocator-related low
           similarity to phosphoenolpyruvate/phosphate translocator
           precursor [Mesembryanthemum crystallinum] GI:9295275,
           phosphate translocator [Nicotiana tabacum] GI:403023;
           contains Pfam profile: PF00892 Integral membrane protein
           DUF6
          Length = 344

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = +2

Query: 446 LVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGER 592
           +  L++   ++ +   +S+  +PVS+   + ATTP +TA  A ++  +R
Sbjct: 80  IAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKR 128


>At2g45220.1 68415.m05630 pectinesterase family protein contains
           Pfam profile: PF01095 pectinesterase
          Length = 511

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 437 TRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLW 556
           T +++PL    +   LC+ ++I KVP +Y    K   P W
Sbjct: 150 TDIVLPLMSNNVSNLLCNTLAINKVPFNYTPPEKDGFPSW 189


>At5g05820.1 68418.m00640 phosphate translocator-related low
           similarity to phosphoenolpyruvate/phosphate translocator
           precursor [Mesembryanthemum crystallinum] GI:9295275,
           glucose-6-phosphate/phosphate-translocator precursor
           [Zea mays] GI:2997589; contains Pfam profile PF00892:
           Integral membrane protein
          Length = 309

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +2

Query: 446 LVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVL 580
           +  L++   ++ +   +S+  +PVS+   + ATTP +TA  A ++
Sbjct: 80  IAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLM 124


>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
           potassium channel protein identical to SKOR [Arabidopsis
           thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
           6 transmembrane (1P/6TM) Shaker K+ channel family,
           PMID:11500563
          Length = 828

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 172 FYHRITEDL*FNNSLLFRTIHEIILCNIYIFGNQACLYY 56
           F+H++ +D+  N   LF  I ++I   +Y     AC++Y
Sbjct: 201 FFHKMEKDIRIN--YLFTRIVKLIFVELYCTHTAACIFY 237


>At4g21630.1 68417.m03135 subtilase family protein contains
           similarity to subtilase; SP1 GI:9957714 from [Oryza
           sativa]
          Length = 772

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 248 VGFLCAAWYMLSSASNVVGKLALTELPFP 334
           + ++C+A Y+ SS S V+GK     +P P
Sbjct: 638 INYMCSAGYIDSSISRVLGKKTKCTIPKP 666


>At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein
           similar to leucine zipper protein GI:10177020 from
           [Arabidopsis thaliana] contains Pfam domain PF03081:
           Exo70 exocyst complex subunit;
          Length = 599

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +1

Query: 220 KRLQARDTNSWLPVRSVVYVKFSQ*CRGQTGINRATISTNYDSGTAVCSGLAECTRASPV 399
           +RL      S LPV SV  + F + CRG T     T   N+    A+ S L E  R   V
Sbjct: 264 ERLLCDRVFSDLPVSSVTDLSFMEVCRGTT-----TQLLNFADAIALGSRLPE--RLFKV 316

Query: 400 WSTFDAMADELLDPCLSTL-GDRQTS 474
              ++AM D  L P + TL  DR  S
Sbjct: 317 VDLYEAMQD--LIPKMETLFSDRYCS 340


>At5g40820.1 68418.m04956 FAT domain-containing protein /
            phosphatidylinositol 3- and 4-kinase family protein
            similar to Atr protein [Xenopus laevis] GI:11385422;
            contains Pfam profiles PF00454 Phosphatidylinositol 3-
            and 4-kinase, PF02259 FAT domain, PF02260 FAT C domain
          Length = 2702

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 346  SGTAVCSGLAECT-RASPVWSTFDAMADELLDPCLST 453
            SG+  C G  E   R   +W  F     EL+ PCL++
Sbjct: 1424 SGSRRCGGNNEVKDRGQKLWDRFSNYVKELIAPCLTS 1460


>At2g39620.1 68415.m04857 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 836

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 319 RATISTNYDSGTAVCSGLAECTRASPVWSTFDAM 420
           +A I +  ++ TAV S  A+C R SP    F+ +
Sbjct: 429 KADIESELETATAVISMYAKCGRFSPALKAFERL 462


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,370,619
Number of Sequences: 28952
Number of extensions: 269558
Number of successful extensions: 734
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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