Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d07r
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 1.7
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 3.9
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 5.1
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 5.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.1
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 6.8
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 9.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.0
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 421 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 458
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 227 RALRTGSTPGSGWRASGPGTPSPPARPAC*GTRSAQPP 340
R + + P SG+ S GTP RPA SA P
Sbjct: 421 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 458
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 686 EYFLDRIDLIEKEDYIPSDSD 624
EY RID E+Y P SD
Sbjct: 115 EYECSRIDYFPNEEYSPDPSD 135
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.6 bits (46), Expect = 3.9
Identities = 7/31 (22%), Positives = 17/31 (54%)
Frame = -1
Query: 446 VACSDFDQTLREDNTTNRLQESLNLFEDVWQ 354
+AC D + + ++ L+ S+N+ + W+
Sbjct: 13 IACQDVTSAIHQRKSSKNLEHSMNVIHE-WK 42
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 277 PRDTFASSTSCLLRNTISPASR 342
PRD + CL N PA R
Sbjct: 95 PRDKIEGAEDCLYLNVYVPADR 116
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 277 PRDTFASSTSCLLRNTISPASR 342
PRD + CL N PA R
Sbjct: 95 PRDKIEGAEDCLYLNVYVPADR 116
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 413 PSKFGRSRYKPPR 451
PS F R RY PP+
Sbjct: 989 PSPFKRGRYTPPQ 1001
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 669 DRLDRERRLHSVGQR 625
DR RER +H+ GQ+
Sbjct: 1421 DRSSREREVHNGGQQ 1435
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 6.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 292 ASSTSCLLRNTISPASRRNLLCHTSSKRFKDSC 390
ASS SCL + I + L S+R DSC
Sbjct: 323 ASSCSCLDCDEIRESLDTQFLQVCRSRRHSDSC 355
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 496 GKSGYRCLKVSTRSGSWWLVATSTK 422
G YR L++ T + SW T+ K
Sbjct: 51 GNKKYRALRLDTGNFSWGSECTTRK 75
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 257 SGWRASGPGTPSPPARP 307
SG + + P TPSPP P
Sbjct: 386 SGAQFATPCTPSPPRGP 402
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,606
Number of Sequences: 438
Number of extensions: 4914
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -