Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d07f
(602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10) 65 5e-11
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 60 1e-09
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 44 7e-05
SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_44678| Best HMM Match : MoCF_biosynth (HMM E-Value=1.5e-19) 28 5.1
SB_38599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +2
Query: 335 EDQEHSIEIDRQIKQWIKNYNGAIKLLLLGTGESGKTTIIKQMKILHVHGFSASERKEKI 514
E + + EI++QI+Q +N +KLLLLGTGESGK+T IKQM+I+H G+S +++ I
Sbjct: 11 ERKRINAEIEKQIRQDKRNQRRELKLLLLGTGESGKSTSIKQMRIIHGQGYSDEDKRGYI 70
Query: 515 KHIKFNIHESIYEIVHSMSRLSI 583
+ NI +++ + +M L I
Sbjct: 71 PLVYQNIITAMHSLTRAMETLKI 93
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +2
Query: 344 EHSIEIDRQIKQWIKNYNGAIKLLLLGTGESGKTTIIKQMKILHVHGFSASERKEKIKHI 523
E S ID+ ++ + +KLLLLG GESGK+TI+KQMKI+H HG+S E + + +
Sbjct: 14 ERSKMIDKNLRADGERAAREVKLLLLGAGESGKSTIVKQMKIIHEHGYSTEECTQYKQVV 73
Query: 524 KFNIHESIYEIVHSMSRLSIALQNP 598
N +S+ I+ +M L I +P
Sbjct: 74 YSNTIQSMIAIIRAMGTLKIEFGHP 98
>SB_4844| Best HMM Match : G-alpha (HMM E-Value=3.6e-10)
Length = 290
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = +2
Query: 422 GTGESGKTTIIKQMKILH-VHGFSASERKEKIKHIKFNIHESIYEIVHSMSRLS--IALQ 592
G GESGK+TI+KQM+ILH VHGF+ E+++KI+ IK NI ++I I +MS L+ + L
Sbjct: 156 GAGESGKSTIVKQMRILHDVHGFTELEKRQKIEDIKKNIRDAILTITGAMSTLTPPVKLA 215
Query: 593 NP 598
NP
Sbjct: 216 NP 217
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +2
Query: 404 IKLLLLGTGESGKTTIIKQMKILHVHGFSASERKEKIKHIKFNIHESIYEIVHSMSRLSI 583
+KLLLLG GESGK+TI+KQM+I+H HGFS + + + N S+ I+ +M +L I
Sbjct: 34 VKLLLLGAGESGKSTIVKQMRIIHDHGFSPEDYIQYRPLVFSNTIYSLLTIIRAMDKLRI 93
Query: 584 ALQN 595
+N
Sbjct: 94 DFEN 97
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/88 (34%), Positives = 47/88 (53%)
Frame = +2
Query: 335 EDQEHSIEIDRQIKQWIKNYNGAIKLLLLGTGESGKTTIIKQMKILHVHGFSASERKEKI 514
E + S +ID+QI Q +K+LLLG GESGK+T +KQM+I++ F A +E
Sbjct: 222 EQRAQSQKIDKQIAQEKAQLRRQVKILLLGAGESGKSTFLKQMRIIYGKDFDADALQEYK 281
Query: 515 KHIKFNIHESIYEIVHSMSRLSIALQNP 598
+ NI + + + + +L I P
Sbjct: 282 PVVYSNILKGMKVLADARRKLRIDWDAP 309
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +2
Query: 344 EHSIEIDRQIKQWIKNYNGAIKLLLLGTGESGKTTIIKQMKILHVHGFSASERKEKIKHI 523
+ S ID + Q + + I+LL L +G SGK+T IKQ+KI++ GF+ ER E +
Sbjct: 21 KRSQHIDALLDQERERKSQEIQLLTLVSGNSGKSTFIKQLKIVYDDGFNEKERLEYRPQV 80
Query: 524 KFNIHESIYEIVHSMSRLSI 583
+ +I +I ++ +L +
Sbjct: 81 YRLLAGNIAKITRAVEQLGL 100
>SB_58122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 440 KTTIIKQMKILHVHGFSASERKEKIKHIKFNIHESIYEIVHSMSRLSI 583
K+T IKQ+KI++ GF+ ER E + + +I +I ++ +L +
Sbjct: 2 KSTFIKQLKIVYDDGFNEKERLEYRPQVYRLLAGNIAKITRAVEQLGL 49
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Frame = +2
Query: 404 IKLLLLGTGESGKTTIIKQM---KILHV 478
+++LLLG SGKTTI+K + +LH+
Sbjct: 18 MRILLLGLDNSGKTTILKSLASEDVLHI 45
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 362 LSQLSAPGLRRSLSCRVASALYIENLNINYPLFRLVDGTRSRLPSKISQTITM 204
LS L RR L+C +++NLN PL+ + D RSR + + +T+
Sbjct: 2817 LSGLQTLEDRRHLACEA----FMKNLNRQNPLYHIADSRRSRKTNYYRERLTI 2865
>SB_44678| Best HMM Match : MoCF_biosynth (HMM E-Value=1.5e-19)
Length = 348
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 341 QEHSIEIDRQIKQWIKNYNGAIKLLLLGTGESGKTTIIKQMKILH---VHGFSASERKEK 511
++ +++ Q+K+WI++ N + + GTG +G+ + L+ + GF R
Sbjct: 52 KDEKLQLSAQLKEWIEDSNIQVIISTGGTGLTGRDITPEVFHSLYEKEIEGFGEMFRMVS 111
Query: 512 IKHIKFNIHESIYEIVH 562
K I + + IVH
Sbjct: 112 YKIIGTVGEKQLITIVH 128
>SB_38599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 475 CARILRERKEREN*TYKIQHPRIDIRDSSQHVPSEHRSAES 597
C RI R+RK EN + ++H Q P EH AE+
Sbjct: 41 CIRIERKRKHPENMSSPVEHLSGKSESILQSEPEEHLFAET 81
>SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 439 EDNNHKTNEDITCARILRERKEREN*TYKIQHPRIDIRDSSQHVPSEHRSAES 597
E+ HK NE++ A L ER++++ +++ ++ Q P +H AE+
Sbjct: 173 EEKYHKNNENVLDASELTEREQKQTENDQLEDKTTQTTETPQK-PKQHDVAET 224
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 344 PGLRRSLSCRVASALYIENLNINY 273
PGL RSL+CR+ +A + N +Y
Sbjct: 947 PGLTRSLTCRLIAAKDVRKQNCHY 970
>SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 326 LSCRVASALYIENLNINYPLFRLV 255
L C V+S+LYIE++ +N P+ R V
Sbjct: 594 LVCLVSSSLYIEDVYLNVPVSREV 617
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,906,281
Number of Sequences: 59808
Number of extensions: 348062
Number of successful extensions: 782
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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