Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d06r
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.8  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    22   5.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   5.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.6  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 483 LFHYVPGCMNFIMYCICLERVM*CTGTL 400
           LF  +P  +  I+YCI  + +M    TL
Sbjct: 244 LFFIIPLIILLILYCIIAKNLMSNAATL 271


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -1

Query: 311 CGILILK*ALDKCYKPTVEKLIQNVLKLTLNS*GYECIKIK 189
           C    L  A+  C KP + ++    ++ TLN   Y   ++K
Sbjct: 10  CAQFCLLAAIFTCVKPQLTRISDEAIESTLNDRRYLLRQLK 50


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 75  CD*FYKPMFFQLIKN 119
           CD +Y P ++Q ++N
Sbjct: 34  CDPWYNPYYYQYLQN 48


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 431 WKE*CDVRG 405
           WKE CD++G
Sbjct: 471 WKEKCDIKG 479


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 431 WKE*CDVRG 405
           WKE CD++G
Sbjct: 478 WKEKCDIKG 486


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = +3

Query: 90  KPMFFQLIKNL 122
           KP++F+L+KNL
Sbjct: 90  KPLWFKLLKNL 100


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = +3

Query: 90  KPMFFQLIKNL 122
           KP++F+L+KNL
Sbjct: 90  KPLWFKLLKNL 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,538
Number of Sequences: 336
Number of extensions: 3001
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)