Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d06r
         (719 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070378-1|AAH70378.1|  158|Homo sapiens basic transcription fac...    36   0.19 
BC022371-1|AAH22371.1|  158|Homo sapiens BTF3L4 protein protein.       36   0.19 
BC021004-1|AAH21004.1|  153|Homo sapiens BTF3L4 protein protein.       36   0.19 
AL445685-6|CAI17032.1|  158|Homo sapiens basic transcription fac...    36   0.19 
AL139156-5|CAI22856.1|  158|Homo sapiens basic transcription fac...    36   0.19 
AK027750-1|BAB55342.1|  158|Homo sapiens protein ( Homo sapiens ...    36   0.19 
X74070-1|CAA52200.1|  162|Homo sapiens transcription factor BTF3...    34   0.45 
X53281-1|CAA37376.1|  162|Homo sapiens general transcription fac...    34   0.45 
X53280-1|CAA37375.1|  206|Homo sapiens general transcription fac...    34   0.45 
BT007120-1|AAP35784.1|  162|Homo sapiens basic transcription fac...    34   0.45 
BC008062-1|AAH08062.1|  162|Homo sapiens basic transcription fac...    34   0.45 
AB062126-1|BAB93458.1|  162|Homo sapiens transcription factor BT...    34   0.45 
BC062736-1|AAH62736.1|  102|Homo sapiens LOC503543 protein protein.    32   2.4  
AY392939-1|AAS85879.1|  141|Homo sapiens immunoglobulin heavy ch...    31   5.5  

>BC070378-1|AAH70378.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           EEDD+VP+LV NFDEASK
Sbjct: 137 EEDDDVPDLVENFDEASK 154


>BC022371-1|AAH22371.1|  158|Homo sapiens BTF3L4 protein protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           EEDD+VP+LV NFDEASK
Sbjct: 137 EEDDDVPDLVENFDEASK 154


>BC021004-1|AAH21004.1|  153|Homo sapiens BTF3L4 protein protein.
          Length = 153

 Score = 35.5 bits (78), Expect = 0.19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           EEDD+VP+LV NFDEASK
Sbjct: 132 EEDDDVPDLVENFDEASK 149


>AL445685-6|CAI17032.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           EEDD+VP+LV NFDEASK
Sbjct: 137 EEDDDVPDLVENFDEASK 154


>AL139156-5|CAI22856.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           EEDD+VP+LV NFDEASK
Sbjct: 137 EEDDDVPDLVENFDEASK 154


>AK027750-1|BAB55342.1|  158|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
           TRANSCRIPTION FACTOR BTF3. ).
          Length = 158

 Score = 35.5 bits (78), Expect = 0.19
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           EEDD+VP+LV NFDEASK
Sbjct: 137 EEDDDVPDLVENFDEASK 154


>X74070-1|CAA52200.1|  162|Homo sapiens transcription factor BTF3
           protein.
          Length = 162

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           ++DDEVP+LV NFDEASK
Sbjct: 141 DDDDEVPDLVENFDEASK 158


>X53281-1|CAA37376.1|  162|Homo sapiens general transcription factor
           protein.
          Length = 162

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           ++DDEVP+LV NFDEASK
Sbjct: 141 DDDDEVPDLVENFDEASK 158


>X53280-1|CAA37375.1|  206|Homo sapiens general transcription factor
            protein.
          Length = 206

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           ++DDEVP+LV NFDEASK
Sbjct: 185 DDDDEVPDLVENFDEASK 202


>BT007120-1|AAP35784.1|  162|Homo sapiens basic transcription factor
           3 protein.
          Length = 162

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           ++DDEVP+LV NFDEASK
Sbjct: 141 DDDDEVPDLVENFDEASK 158


>BC008062-1|AAH08062.1|  162|Homo sapiens basic transcription factor
           3 protein.
          Length = 162

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           ++DDEVP+LV NFDEASK
Sbjct: 141 DDDDEVPDLVENFDEASK 158


>AB062126-1|BAB93458.1|  162|Homo sapiens transcription factor BTF 3
           protein.
          Length = 162

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           ++DDEVP+LV NFDEASK
Sbjct: 141 DDDDEVPDLVENFDEASK 158


>BC062736-1|AAH62736.1|  102|Homo sapiens LOC503543 protein protein.
          Length = 102

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -3

Query: 717 EEDDEVPNLVGNFDEASK 664
           ++DDEVP ++ NFDEASK
Sbjct: 81  DDDDEVPGIMENFDEASK 98


>AY392939-1|AAS85879.1|  141|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 141

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 534 MSRVSEAICVSKE*FSLLFHYVPGCMNFIMYCICLER 424
           MSRV+  +  SK  FSL+ + V      + YC+ L+R
Sbjct: 73  MSRVTMPVDTSKNQFSLILNLVTAADTAVYYCVSLQR 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,610,785
Number of Sequences: 237096
Number of extensions: 1539069
Number of successful extensions: 4238
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4238
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)