Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d04f
(602 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 33 0.19
At5g15860.2 68418.m01856 expressed protein 31 0.59
At5g15860.1 68418.m01855 expressed protein 31 0.59
At2g37925.1 68415.m04655 copper transporter family protein simil... 31 0.78
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 30 1.0
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 30 1.0
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 30 1.4
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 29 1.8
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 29 2.4
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 29 2.4
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 29 2.4
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 3.1
At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein si... 28 4.1
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 4.1
At1g26390.1 68414.m03219 FAD-binding domain-containing protein s... 28 5.5
At1g07440.1 68414.m00794 tropinone reductase, putative / tropine... 28 5.5
At4g21585.1 68417.m03124 bifunctional nuclease, putative similar... 27 7.2
At3g55160.1 68416.m06126 expressed protein 27 7.2
At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138... 27 7.2
At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containi... 27 7.2
At4g28680.1 68417.m04098 tyrosine decarboxylase, putative simila... 27 9.6
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 27 9.6
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 9.6
At2g16650.1 68415.m01911 expressed protein 27 9.6
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 589 PTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPL-TAVLYRPLARPRQSTTIT 413
P P L P +T+P LPPP N PTL P+ T +Y+P P T T
Sbjct: 63 PPVHKPTLSPPVYTKPTLPPPAYTPPV----YNKPTLPAPVYTPPVYKPTLSPPVYTKPT 118
Query: 412 L 410
L
Sbjct: 119 L 119
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = -2
Query: 592 LPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTIT 413
LP P L P +T+P L P + N P+L P +Y+P P T T
Sbjct: 120 LPPVFKPTLSPPVYTKPTLSPTVYKPTLSPPVNNKPSLSPP----VYKPTLSPPVYTKPT 175
Query: 412 LQSETASKA 386
L K+
Sbjct: 176 LPPPVYKKS 184
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 601 RPAL-PTTCAPKLKPIKWTRPQLPPPL 524
+P+L P P L P +T+P LPPP+
Sbjct: 154 KPSLSPPVYKPTLSPPVYTKPTLPPPV 180
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 31.1 bits (67), Expect = 0.59
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +3
Query: 297 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 470
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 471 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNA 596
F+ N I+ GG+ R++L+G S GAH+ A
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHIAACA 244
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 31.1 bits (67), Expect = 0.59
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +3
Query: 297 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 470
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 471 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNA 596
F+ N I+ GG+ R++L+G S GAH+ A
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHIAACA 244
>At2g37925.1 68415.m04655 copper transporter family protein similar
to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis
thaliana}; contains Pfam profile PF04145: Ctr copper
transporter family; supporting cDNA
gi|18496855|gb|AF466372.1|
Length = 145
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 327 VIVHGWNSNGNSAVNTMIRPALLAVS-----DCNVIVVDWRGLANGLYNTAV 467
V+V WN+ + T RP+LL + +C V+ W G G+Y A+
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALAL 59
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 602 SSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 471
S V N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 770 SDDVGMNLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 602 SSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 471
S V N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 770 SDDVGMNLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 589 PTTCAPKLKPIKWTRPQLPPPLLMSQT-KKLP-RNCPTLGTPL-TAVLYRPLARP 434
P P L P +T+P +PPP+ K P PT+ P+ T +Y+P P
Sbjct: 97 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKPTPVYTKPTIPPPVYTPPVYKPTPSP 151
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -2
Query: 589 PTTCAPKLKPIKWTRPQLPPPL----LMSQTKKLP-RNCPTLGTPL-TAVLYRPLARPRQ 428
P P L P +T+P +PPP+ + T P PT+ P+ T +Y+P P
Sbjct: 49 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKHTPSPPVYTKPTIPPPVYTPPVYKPTLSPPV 108
Query: 427 STTITL 410
T T+
Sbjct: 109 YTKPTI 114
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 393 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 572
L+ D V +D+R G + V S F+ N + GG+ R++L+G S
Sbjct: 232 LSERDIIVACIDYRNFPQGSISDMVKDASSGISFVCNHIA----EYGGDPDRIYLMGQSA 287
Query: 573 GAHV 584
GAH+
Sbjct: 288 GAHI 291
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 602 SSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 471
S V N+ A A+++ +P+A+ V +P + E S GN+
Sbjct: 770 SDDVGMNLLASVAADEMSKSPVASPSVSQPPNSLMNENSTVGNN 813
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 360 SAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV-----WLIN 524
SA+N+++ A +AV+ V+ W+ LA ++ VP V +F+G F + WL
Sbjct: 181 SAINSLVMCASVAVTYLLGSVISWQKLA------LISTVPCVFEFVGLFFIPESPRWLSR 234
Query: 525 NG 530
NG
Sbjct: 235 NG 236
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 393 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 572
LA D V +D+R G + V+ F+ N I+ GG+ R++L+G S
Sbjct: 176 LAERDIIVACLDYRNFPQGTISDMVSDAAQGISFVCNN----ISAFGGDPNRIYLMGQSA 231
Query: 573 GAHV 584
GAH+
Sbjct: 232 GAHI 235
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -2
Query: 598 PALPTTCAPKLKPIKW--TRPQLP--PPLLMSQTKKLPRNCPTLGTPLTAV 458
P LPT P L PI T P LP PP+ + LP P+ PL V
Sbjct: 314 PLLPTPPTPTLPPIPTIPTLPPLPVLPPVPIVNPPSLPPPPPSFPVPLPPV 364
>At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase, basic
vacuolar isoform precursor SP:P52407 from [Hevea
brasiliensis]
Length = 306
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 225 WLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 371
W +R QN + + +++ S G+LP+ V GW SNG +A +
Sbjct: 222 WDGSRGYQNLFDALLDVVYSAVERSG-GGSLPVVVSESGWPSNGGNAAS 269
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 198 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 371
+ NG NN N NN NGN N+ N+N N N +G N+NGN+ N
Sbjct: 87 NNNGNNNN----DNNNGNNKDNNNNGNNNNGNNNNGNDN-------NGNNNNGNNNDN 133
>At1g26390.1 68414.m03219 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 530
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 11 QHEAPTSAGWLNSIVFWQCYP 73
+HE WLNS +FW YP
Sbjct: 330 KHEDCQEMSWLNSTLFWADYP 350
>At1g07440.1 68414.m00794 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 266
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 590 TDNVRAQAEANQVDSTPIAASVVDEPDQKV 501
+D +RA A A V +TP+A +V D+ +KV
Sbjct: 184 SDGIRANAVAPAVIATPLAEAVYDDEFKKV 213
>At4g21585.1 68417.m03124 bifunctional nuclease, putative similar to
bifunctional nuclease [Zinnia elegans]
gi|4099833|gb|AAD00694
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 162 DLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFV 329
D+ +P L G N + RR N H V N + S + YN +LPL +
Sbjct: 151 DIHQPLHVGFL-GDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKSLPLMI 205
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 27.5 bits (58), Expect = 7.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 38 WLNSIVFWQCYPHDPWRQQ 94
WL+S ++ CYP P+R++
Sbjct: 762 WLSSFLYLSCYPSAPYRRK 780
>At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 579
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -2
Query: 523 LMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLF 344
+ S +KL CP +T +L R L PR + E + T+EFP L+
Sbjct: 397 MTSNERKLAGLCPLNAKEVTRLL-RALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLY 455
Query: 343 QPWTI 329
+ I
Sbjct: 456 NKYDI 460
>At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 284 VDIAICNNLMVVLV---TSGEKPVLVVCTVP*HKDVFLGRFFQVNEVRNTLAIRHPNVSA 114
VD+ + + VL + G P +V+C + H LGRF + +V +L R
Sbjct: 423 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 482
Query: 113 YTF 105
YTF
Sbjct: 483 YTF 485
>At4g28680.1 68417.m04098 tyrosine decarboxylase, putative similar
to SP|P54768 Tyrosine/DOPA decarboxylase 1 [Includes:
DOPA decarboxylase (EC 4.1.1.28) (DDC); Tyrosine
decarboxylase (EC 4.1.1.25)] {Papaver somniferum},
SP|Q06086 Tyrosine decarboxylase 2 (EC 4.1.1.25)
{Petroselinum crispum}; contains Pfam profile PF00282:
Pyridoxal-dependent decarboxylase conserved domain
Length = 545
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 234 TRRNQNNHQVITNGNVNSIRNSNYNGN 314
T +N TNGN ++ N NYNGN
Sbjct: 14 TGNGYSNGNGYTNGNGHTNGNGNYNGN 40
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 243 NQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCN 413
N N + N NV +I + + NL +FV H N + +V+ ++ ++ AV +C+
Sbjct: 33 NNNKKKNNNNNNVRNIHVAAFEKNLNVFVRDH--LENCSVSVDDVVDDSIKAVPECS 87
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 377 DPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWSSQCRT 490
D P L ++YC G + SC+ + C SQCR+
Sbjct: 620 DCPCLTNETCCEKYC-GCSKSCKNRFRGCHCAKSQCRS 656
>At2g16650.1 68415.m01911 expressed protein
Length = 511
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 308 WKPASLCYCPRLEQQRKLRCEHH 376
+ PA LC+C +LE ++ E H
Sbjct: 149 YAPALLCFCEKLEAEKGYEVEEH 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,539,659
Number of Sequences: 28952
Number of extensions: 334221
Number of successful extensions: 1396
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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