Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d03r
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 423 e-119
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 71 1e-12
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 70 2e-12
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 67 1e-11
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 36 0.031
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 36 0.031
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 36 0.031
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.7
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 3.5
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 28 8.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.2
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase subunit
protein 2 protein.
Length = 538
Score = 423 bits (1042), Expect = e-119
Identities = 205/233 (87%), Positives = 218/233 (93%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKG 574
FRDQEGQD+LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG+MQERITTTKKG
Sbjct: 302 FRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTKKG 361
Query: 573 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI 394
SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAEL IYPAVDPLDSTSRIMDPN+
Sbjct: 362 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNV 421
Query: 393 IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAE 214
+G HY++ARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RARKIQRFLSQPFQVAE
Sbjct: 422 VGQNHYDIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAE 481
Query: 213 VFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLAK 55
VFTGH GK V LEETI+GF+ IL G+ DHLPEVAFYM G I++V KA+ LAK
Sbjct: 482 VFTGHQGKFVSLEETIRGFTMILKGELDHLPEVAFYMQGGIDDVFKKAEELAK 534
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 70.5 bits (165), Expect = 1e-12
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-- 580
FRD G ++ + D+ R+ +A E+S LG +P+ GY LA + + ER K
Sbjct: 326 FRDM-GLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCL 384
Query: 579 -----KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 415
+GS+T V A+ P D DP + T + L + +A+ +P+++ L S S
Sbjct: 385 GSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYS 444
Query: 414 RIM-------DPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAR 256
M + N E ++ ++ILQ+ + L +I+ ++G L+E DK+T+
Sbjct: 445 EYMRALEEFYEKNY--PEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTL---- 498
Query: 255 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYD 130
++ + + F +T + + P +T+ G K + G YD
Sbjct: 499 EVAKIIKDDFLQQNGYTKY-DRFCPFYKTV-GMLKNMIGFYD 538
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 69.7 bits (163), Expect = 2e-12
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Frame = -1
Query: 738 GQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK--KGSIT 565
G+ +L+ + ++ + +A E+SA +P G+ + TD+ T+ ER K +GSIT
Sbjct: 282 GKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGREGSIT 341
Query: 564 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM----DPN 397
+ + +P +D+T P P T + + + + + IYP +D L S SR+M
Sbjct: 342 QIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGEG 401
Query: 396 IIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 232
+ +H +++ + K +Q + A++G++ LS +D L + K ++ F++Q
Sbjct: 402 MTREDHSDLSNQLYACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKFEKNFIAQ 457
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Frame = -1
Query: 729 LLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQ 556
+L+ + ++ + +A EVSA +P G+ + TD+ T+ ER + GSIT +
Sbjct: 273 VLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIP 332
Query: 555 AIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IG 388
+ +P DD+T P P T + + R + IYP ++ L S SR+M I
Sbjct: 333 ILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGMTR 392
Query: 387 AEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 232
+H +V+ + K +Q + A++G + LS +D L + K ++ F++Q
Sbjct: 393 EDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNFITQ 445
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK- 577
FRD G+ L+ D++ + A ++S LL R P Y + + ER
Sbjct: 258 FRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNS 316
Query: 576 ---GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 409
GS+T++ I A D++ P + D L + G+ PA++ S SR+
Sbjct: 317 LGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 375
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK- 577
FRD G+ L+ D++ + A ++S LL R P Y + + ER
Sbjct: 250 FRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNS 308
Query: 576 ---GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 409
GS+T++ I A D++ P + D L + G+ PA++ S SR+
Sbjct: 309 LGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 367
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK- 577
FRD G+ L+ D++ + A ++S LL R P Y + + ER
Sbjct: 285 FRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNS 343
Query: 576 ---GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 409
GS+T++ I A D++ P + D L + G+ PA++ S SR+
Sbjct: 344 LGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 402
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 639 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 478
Y PT T T+ TTT+ + T+V+ A +T P P TT + TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = -1
Query: 621 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 442
T+ T +E TTT + T+ P + T+P+P T A +TT + +E
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540
Query: 441 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 286
+P TS + P E + DY L ++ + D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -1
Query: 630 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 451
T+AT + TTTK + T++ + T P P TT + TT +R IA
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230
Query: 450 IYPAVDPLDSTSRIMDP 400
V P+ + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -1
Query: 633 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 454
PT T T + TTT + + P T PAP TT TT+ + A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
>U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical
protein D2021.4a protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 417 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 241
++I D N+I + HYN V+ G + L D K ++ + + D E K+ +A + +F
Sbjct: 56 NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114
Query: 240 LSQ-PF 226
L + PF
Sbjct: 115 LRKIPF 120
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 547 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 648
INSL + GTFLG G + HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = -1
Query: 678 VSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFA 499
VS+ ++P QPT+++++G + + T K+ +I V+ P+ P T
Sbjct: 1332 VSSFAPKVPETKINQPTISSNIGDLSK---TEKESTIPRVEV--TPS---ASPESTTVTE 1383
Query: 498 HLDATTVLSRAIAELGIYPA 439
H+DA T S I +G P+
Sbjct: 1384 HIDAET-NSATIPTIGTPPS 1402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,562,495
Number of Sequences: 27780
Number of extensions: 388376
Number of successful extensions: 1044
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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