Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d03r
(753 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria... 390 e-109
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,... 390 e-109
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria... 390 e-109
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 75 5e-14
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 75 5e-14
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 74 9e-14
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 70 2e-12
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 58 6e-09
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 35 0.050
At3g50150.1 68416.m05482 expressed protein contains Pfam profile... 33 0.20
At2g24820.1 68415.m02969 Rieske [2Fe-2S] domain-containing prote... 31 1.1
At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase (... 30 1.4
At3g11560.3 68416.m01412 expressed protein 28 5.8
At3g11560.2 68416.m01411 expressed protein 28 5.8
At3g11560.1 68416.m01410 expressed protein 28 5.8
At2g44620.1 68415.m05554 acyl carrier protein, mitochondrial / A... 28 5.8
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 28 7.7
>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
identical to SP|P83484 ATP synthase beta chain 2,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452187|dbj|AK118582.1|
Length = 556
Score = 390 bits (960), Expect = e-109
Identities = 189/235 (80%), Positives = 210/235 (89%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKG 574
FRD EGQD+LLFIDNIFRFTQA SEVSALLGRIPSAVGYQPTLA+D+G +QERITTTKKG
Sbjct: 320 FRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERITTTKKG 379
Query: 573 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI 394
SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR I+ELGIYPAVDPLDSTSR++ P+I
Sbjct: 380 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHI 439
Query: 393 IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAE 214
+G EHYN ARGVQK+LQ+YK+LQDIIAILGMDELSE+DKLTVARARKIQRFLSQPF VAE
Sbjct: 440 LGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAE 499
Query: 213 VFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLAKNA 49
+FTG GK V L+E I F +L G YD L E +FYMVG I+EVVAKA+ +AK +
Sbjct: 500 IFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIAKES 554
>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
putative strong similarity to SP|P83483 ATP synthase beta
chain 1, mitochondrial precursor (EC 3.6.3.14)
{Arabidopsis thaliana}, SP|P17614 ATP synthase beta
chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
plumbaginifolia}; contains Pfam profiles PF00006: ATP
synthase alpha/beta family nucleotide-binding domain,
PF00306: ATP synthase ab C terminal, PF02874: ATP
synthase alpha/beta family beta-barrel domain
Length = 559
Score = 390 bits (960), Expect = e-109
Identities = 189/235 (80%), Positives = 210/235 (89%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKG 574
FRD EGQD+LLFIDNIFRFTQA SEVSALLGRIPSAVGYQPTLA+D+G +QERITTTKKG
Sbjct: 323 FRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERITTTKKG 382
Query: 573 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI 394
SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR I+ELGIYPAVDPLDSTSR++ P+I
Sbjct: 383 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHI 442
Query: 393 IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAE 214
+G EHYN ARGVQK+LQ+YK+LQDIIAILGMDELSE+DKLTVARARKIQRFLSQPF VAE
Sbjct: 443 LGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAE 502
Query: 213 VFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLAKNA 49
+FTG GK V L+E I F +L G YD L E +FYMVG I+EVVAKA+ +AK +
Sbjct: 503 IFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIAKES 557
>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
identical to SP|P83483 ATP synthase beta chain 1,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452102|dbj|AK118538.1|
Length = 556
Score = 390 bits (960), Expect = e-109
Identities = 189/235 (80%), Positives = 210/235 (89%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKG 574
FRD EGQD+LLFIDNIFRFTQA SEVSALLGRIPSAVGYQPTLA+D+G +QERITTTKKG
Sbjct: 320 FRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERITTTKKG 379
Query: 573 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI 394
SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR I+ELGIYPAVDPLDSTSR++ P+I
Sbjct: 380 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHI 439
Query: 393 IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAE 214
+G EHYN ARGVQK+LQ+YK+LQDIIAILGMDELSE+DKLTVARARKIQRFLSQPF VAE
Sbjct: 440 LGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAE 499
Query: 213 VFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLAKNA 49
+FTG GK V L+E I F +L G YD L E +FYMVG I+EVVAKA+ +AK +
Sbjct: 500 IFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIAKES 554
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 74.9 bits (176), Expect = 5e-14
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Frame = -1
Query: 738 GQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSIT 565
G+ +L+ + ++ + A EVSA +P GY + TD+ T+ ER +KGSIT
Sbjct: 267 GKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSIT 326
Query: 564 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI--- 394
+ + +P DD+T P P T + + R + IYP ++ L S SR+M I
Sbjct: 327 QIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEG 386
Query: 393 -IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 232
+H +V+ + K +Q + A++G + LS ED L + K +R F++Q
Sbjct: 387 MTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQ 442
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 74.9 bits (176), Expect = 5e-14
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Frame = -1
Query: 738 GQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSIT 565
G+ +L+ + ++ + A EVSA +P GY + TD+ T+ ER +KGSIT
Sbjct: 267 GKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSIT 326
Query: 564 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI--- 394
+ + +P DD+T P P T + + R + IYP ++ L S SR+M I
Sbjct: 327 QIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEG 386
Query: 393 -IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 232
+H +V+ + K +Q + A++G + LS ED L + K +R F++Q
Sbjct: 387 MTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQ 442
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 74.1 bits (174), Expect = 9e-14
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Frame = -1
Query: 738 GQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSIT 565
G+ +L+ + ++ + A EVSA +P GY + TD+ T+ ER +KGSIT
Sbjct: 266 GKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSIT 325
Query: 564 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI--- 394
+ + +P DD+T P P T + + R + IYP ++ L S SR+M I
Sbjct: 326 QIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEG 385
Query: 393 -IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR 244
+H +V+ + K +Q + A++G + LS ED L + K +R
Sbjct: 386 MTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFER 436
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-- 580
FRD G ++ + D+ R+ +A E+S L +P+ GY LA + + ER K
Sbjct: 340 FRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCL 398
Query: 579 -----KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 415
GS+T V A+ P D +DP + T + + L + +A+ +P+V+ L S S
Sbjct: 399 GGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYS 458
Query: 414 RIMDP-----NIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKI 250
+ + N+ +++LQ L +I+ ++G D L+E DK+T+ A+ +
Sbjct: 459 KYSTALESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLL 518
Query: 249 QR-FLSQ 232
+ +L+Q
Sbjct: 519 REDYLAQ 525
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 58.0 bits (134), Expect = 6e-09
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = -1
Query: 621 TDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 448
TD+ T+ ER +KGSIT + + +P DD+T P P T + + R + I
Sbjct: 304 TDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQI 363
Query: 447 YPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED 280
YP ++ L S SR+M I +H +V+ + K +Q + A++G + LS ED
Sbjct: 364 YPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSED 423
Query: 279 KLTVARARKIQR 244
L + K +R
Sbjct: 424 LLYLEFLDKFER 435
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP
synthase alpha chain, mitochondrial (EC 3.6.3.14)
{Brassica campestris}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF00306: ATP synthase ab C terminal, PF02874:
ATP synthase alpha/beta family beta-barrel domain
Length = 777
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Frame = -1
Query: 753 FRDQEGQDLLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITT---- 586
FRD G L+ D++ + A ++S LL R P + + + ER
Sbjct: 530 FRDN-GMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQ 588
Query: 585 TKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 409
T GS+T++ I A D++ P + D L + GI PA++ S SR+
Sbjct: 589 TGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRV 647
>At3g50150.1 68416.m05482 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function; expression
supported by MPSS
Length = 509
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 277 LVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS 420
L+ F Q HTQ+SNN+ + + N +NS+ ++ L + I H GS
Sbjct: 377 LIAFEQC-HTQSSNNITSYIIFMDNLINSSQDVSYLHHDGIIEHWLGS 423
>At2g24820.1 68415.m02969 Rieske [2Fe-2S] domain-containing protein
similar to Rieske iron-sulfur protein Tic55 from Pisum
sativum [gi:2764524]; contains Pfam PF00355 Rieske
[2Fe-2S] domain
Length = 539
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 283 FFRQLVHTQNSNNVLQGFVVLKNFLNST 366
+FR ++H ++ +NV++ F + KN L++T
Sbjct: 460 YFRHIIHCRSCSNVIKSFELWKNILSAT 487
>At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase (CKI1)
identical to GB:D87545
Length = 1122
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -1
Query: 492 DATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIA 313
+A +++ + + +VD L MD + + Y R ++K+ + Y IIA
Sbjct: 1021 EALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIA 1080
Query: 312 ILGMDELSEEDKLTV 268
+ G D SEE + T+
Sbjct: 1081 VSGHDPGSEEARETI 1095
>At3g11560.3 68416.m01412 expressed protein
Length = 872
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 152 LENPLIVSSSGTSLPACPVNTSATWKGCERNL 247
L+ P +VSSS TS P P + T+ C+R +
Sbjct: 5 LQRPGLVSSSSTSKPCLPRMSIVTFISCKRTV 36
>At3g11560.2 68416.m01411 expressed protein
Length = 872
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 152 LENPLIVSSSGTSLPACPVNTSATWKGCERNL 247
L+ P +VSSS TS P P + T+ C+R +
Sbjct: 5 LQRPGLVSSSSTSKPCLPRMSIVTFISCKRTV 36
>At3g11560.1 68416.m01410 expressed protein
Length = 619
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 152 LENPLIVSSSGTSLPACPVNTSATWKGCERNL 247
L+ P +VSSS TS P P + T+ C+R +
Sbjct: 5 LQRPGLVSSSSTSKPCLPRMSIVTFISCKRTV 36
>At2g44620.1 68415.m05554 acyl carrier protein, mitochondrial / ACP
/ NADH-ubiquinone oxidoreductase 9.6 kDa subunit
identical to SP|P53665 Acyl carrier protein,
mitochondrial precursor (ACP) (NADH-ubiquinone
oxidoreductase 9.6 kDa subunit) (MtACP-1) {Arabidopsis
thaliana}; identical to cDNA acyl carrier protein
precursor GI:468265
Length = 122
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -1
Query: 498 HLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYK 334
HL V+ R + + +P VDP T + N +G + + V I +++K
Sbjct: 40 HLSREAVVDRVLDVVKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFK 94
>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
kinase, putative
Length = 654
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 594 ITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLS 472
+T T G TSV A+ +P L P P T L++ +LS
Sbjct: 80 VTCTSDG--TSVHALRLPGIGLLGPIPPNTLGKLESLRILS 118
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,665,722
Number of Sequences: 28952
Number of extensions: 365518
Number of successful extensions: 917
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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