Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d01r
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46676-1|CAA86661.1|  799|Caenorhabditis elegans Hypothetical pr...    28   5.5  
X16473-1|CAA34493.1|  799|Caenorhabditis elegans zyg-11 protein ...    28   5.5  
AF022980-10|AAG24193.1|  350|Caenorhabditis elegans Serpentine r...    28   5.5  
Z81132-5|CAB03436.1|  345|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z83236-6|CAB05783.1|  132|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81100-3|CAD92386.1|  333|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z46676-1|CAA86661.1|  799|Caenorhabditis elegans Hypothetical
           protein C08B11.1 protein.
          Length = 799

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -1

Query: 568 VTPDCFTFVACVAALRNLQSYFLINLH 488
           ++  C T ++C+++LRNL+   + NL+
Sbjct: 190 ISSTCVTDISCISSLRNLEVLIMYNLN 216


>X16473-1|CAA34493.1|  799|Caenorhabditis elegans zyg-11 protein
           protein.
          Length = 799

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -1

Query: 568 VTPDCFTFVACVAALRNLQSYFLINLH 488
           ++  C T ++C+++LRNL+   + NL+
Sbjct: 190 ISSTCVTDISCISSLRNLEVLIMYNLN 216


>AF022980-10|AAG24193.1|  350|Caenorhabditis elegans Serpentine
           receptor, class j protein44 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -1

Query: 604 FDPIRLVIIQHTVTPDCFTFVACV 533
           F+ +R +I+Q TVTP CF+F  C+
Sbjct: 244 FELLRALIVQ-TVTPICFSFSPCL 266


>Z81132-5|CAB03436.1|  345|Caenorhabditis elegans Hypothetical
           protein T26E4.7 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -1

Query: 559 DCFTFVACVAALRNLQSYF-LINLHYDIPYNFMIGNDGRVYEGRGWGMVGAHTFM 398
           D FTF AC+ +L  + + F  + +   + Y F+       + G GW   G  T M
Sbjct: 187 DLFTFEACIKSLFGVGTRFGKVRIMKKVVYLFIFCFKNTQFRGTGWARDGWLTSM 241


>Z83236-6|CAB05783.1|  132|Caenorhabditis elegans Hypothetical
           protein K10H10.7 protein.
          Length = 132

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 560 WCDGVLDNDQSYRIESCCALRIVGP 634
           W +GV+DN+   R++S C    V P
Sbjct: 40  WAEGVVDNEHMGRLKSNCCCIYVAP 64


>Z81100-3|CAD92386.1|  333|Caenorhabditis elegans Hypothetical
           protein K08G2.9 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 120 KQIVFIVHVK*KYW*MLHIPSSHLSLSV-IVFFVSKIR 10
           K I+F+V++   YW  +  PS +L + + ++FF   +R
Sbjct: 178 KSIIFVVYIGEDYWVNIREPSLNLMVMIEVLFFAVLLR 215


>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 489 CKFIKK*LWRLRN 527
           CKF+K+ LWR+RN
Sbjct: 748 CKFVKRNLWRVRN 760


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,580,559
Number of Sequences: 27780
Number of extensions: 406466
Number of successful extensions: 1187
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)