Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c23f
(575 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0059 + 40805196-40805381,40805593-40805925 35 0.040
03_05_0646 - 26385447-26385463,26385546-26385657,26385838-263859... 33 0.12
04_04_1125 + 31085106-31085714 33 0.22
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 32 0.38
03_05_0756 + 27469002-27469107,27469200-27469369,27470210-274710... 31 0.66
12_02_0408 + 18659494-18660362,18660472-18660634,18660976-186611... 31 0.87
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122... 31 0.87
12_01_0312 + 2349696-2350424 30 1.1
12_01_0311 + 2345492-2346325 30 1.1
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 29 2.0
03_06_0110 - 31727376-31727381,31727554-31727664,31728071-317281... 29 2.0
02_04_0435 + 22912993-22913456,22913847-22914012,22914096-229141... 29 2.0
02_04_0316 - 21978330-21979397 29 2.0
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609... 29 2.0
09_04_0384 - 17153064-17154233 29 2.7
06_01_0290 + 2122758-2123015,2123128-2123544 29 2.7
03_05_0781 + 27654764-27655429,27655902-27656004,27656535-276565... 29 2.7
11_01_0300 + 2253957-2254245,2254783-2254850,2254967-2255098,225... 29 3.5
10_08_0957 + 21801347-21801710,21802319-21802649,21803052-218031... 29 3.5
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 29 3.5
03_05_0267 - 22538631-22539452 29 3.5
10_08_0485 + 18235597-18236256,18236353-18236400,18236522-182366... 28 4.6
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 28 4.6
03_05_0413 - 24002534-24002585,24003185-24003305,24003678-240038... 28 4.6
11_06_0064 + 19733643-19734056 28 6.1
10_07_0100 + 12861588-12862601 28 6.1
09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219 28 6.1
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 28 6.1
01_04_0056 + 15476868-15476896,15477581-15478259 28 6.1
10_03_0006 + 6929237-6929304,6929581-6929603,6929609-6929710,692... 27 8.1
06_02_0234 + 13319390-13320217 27 8.1
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 27 8.1
03_05_0880 - 28450248-28450458,28451911-28452013,28452135-284522... 27 8.1
>01_07_0059 + 40805196-40805381,40805593-40805925
Length = 172
Score = 35.1 bits (77), Expect = 0.040
Identities = 20/38 (52%), Positives = 20/38 (52%)
Frame = -2
Query: 520 HHGHVEAAQLLSRFAVDFAKAADISGFG*VLAGRQSHG 407
HHGH A S FA FA A I GF V A R SHG
Sbjct: 124 HHGHHPAYSSSSSFAPSFAPAVRIQGFD-VAACRSSHG 160
>03_05_0646 -
26385447-26385463,26385546-26385657,26385838-26385957,
26386120-26386371
Length = 166
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 558 PSSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATGEMKS 394
P S A+ P T D S SP PS++P P + R S ++ T +K+
Sbjct: 10 PDSKAATSSPLCLTLDNPTSTSTSPAVPSSAPPPAAALEPSRQSFHERETDAIKA 64
>04_04_1125 + 31085106-31085714
Length = 202
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 96 AAPVCKVPTPWLPSETSPTRSIYASLFRPVVCSTPAPVPS 215
A P PTPW P+ +P + A+ P TPAP PS
Sbjct: 68 ATPTPPTPTPWTPTPATPPPT-PATPATPTTPPTPAPAPS 106
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 69 CAVLLWYRGAAPVCKVPTPWLPSETSPTRSIYASLFRPVVCSTPAPVPSFTLAGSSAP 242
C +W G A +C P P S P +++S PVV ++ PS LAGS+ P
Sbjct: 123 CKYSVWC-GEADICPNPQPAYMSHPKPNPHVFSSPCSPVVFNS----PSNHLAGSTTP 175
>03_05_0756 +
27469002-27469107,27469200-27469369,27470210-27471001,
27471182-27471398,27471972-27472150,27472592-27472833,
27473662-27474052
Length = 698
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 126 WLPSETSPTRSIYASLFRPVVCSTPAPVPSFTLAGSSAP 242
W +ET + Y S P CS +P+P + +GS+ P
Sbjct: 581 WTGTETPESSGNYTSTLIPFSCSKNSPIPCESASGSNQP 619
>12_02_0408 +
18659494-18660362,18660472-18660634,18660976-18661139,
18661253-18661511,18661605-18661712
Length = 520
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -3
Query: 528 SAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATG 406
+AG + CSP P P PQ P GRS A + G
Sbjct: 131 AAGADSDGWDVRCSPPPPPPPPPPQAPPARGRSKAARRKGG 171
>10_08_0762 -
20410681-20411834,20411999-20412098,20412200-20412298,
20412563-20414133,20415080-20415128
Length = 990
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 421 RQSHGRDEVSGLDIPVDA---DETNG 353
R S G+D VSGLD P DA DE NG
Sbjct: 892 RHSEGKDSVSGLDSPGDATCSDEDNG 917
>12_01_0312 + 2349696-2350424
Length = 242
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 391 GLDIPVDADETNGIRGVQTDCASLRDQGRVNYH---HQTITDPDETDILEAASG 239
G ++P+D D+ G RGV A++ + +H H D D+ + ++A+G
Sbjct: 131 GANMPLDLDDGGGFRGVPASAAAVAGLEKQVFHQFDHHGGDDDDDDEAKDSAAG 184
>12_01_0311 + 2345492-2346325
Length = 277
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 391 GLDIPVDADETNGIRGVQTDCASLRDQGRVNYH---HQTITDPDETDILEAASG 239
G ++P+D D+ G RGV A++ + +H H D D+ + ++A+G
Sbjct: 163 GANMPLDLDDGGGFRGVPASAAAVAGLEKQVFHQFDHHGGDDDDDDEAKDSAAG 216
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +3
Query: 318 RRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNPEMSAALAKSTANLESN* 497
RRL+ S +PR L A + S+P S W A +P SAA A+S + +
Sbjct: 245 RRLSCSSFSPRRSLSPRALS--SSPSAMSQMWRAAVAAVGSSPRASAASARSWPEMAAPS 302
Query: 498 AASTCPWCPPTVSLRPPARKA 560
+A P P V+L A+ A
Sbjct: 303 SAPGDPGRGPPVALSSSAQGA 323
>03_06_0110 -
31727376-31727381,31727554-31727664,31728071-31728133,
31729202-31729331,31729532-31729701,31729800-31729859,
31729941-31730018,31730108-31730197,31730275-31731118,
31731220-31731281,31731362-31731423,31731511-31731700
Length = 621
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 DQGRVNYHHQTITDPDETDILEAASGAEDPARVNEGTGAGVEQTTGRNSD 167
+ GR N + + T DE EAAS +E+P V + + VE + N D
Sbjct: 298 EAGRENRNGRENTAADENACPEAASSSEEPKEVMQESRIEVETSQADNCD 347
>02_04_0435 +
22912993-22913456,22913847-22914012,22914096-22914146,
22914353-22914578,22915275-22915963,22916055-22916408
Length = 649
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 316 HGD*RSPSAPLGYHWSRQHQQG 381
HG ++ APLG W+ QH QG
Sbjct: 330 HGSSKAGDAPLGAFWATQHAQG 351
>02_04_0316 - 21978330-21979397
Length = 355
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +2
Query: 125 LVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHS 223
LVALGD+ V RIA S SG + S IHS
Sbjct: 33 LVALGDRMAAVRRRIAASISGESGPLSSSDIHS 65
>01_03_0050 +
11959421-11959736,11959892-11959960,11960641-11960979,
11961090-11961152,11962472-11962962,11963773-11964441
Length = 648
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -3
Query: 555 SSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATGEMKSVG 388
S L S+ S K S SP + + T PD G+ ++ +TG+ + G
Sbjct: 539 SGLTQSKEASKTPATKKKTESTSPAAKKLKIEETTAPDEGKKAVKTHSTGKKRKAG 594
>09_04_0384 - 17153064-17154233
Length = 389
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -3
Query: 573 YLEVWPSSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATGEMKS 394
++E W + RR + +++ S S S S SP P++ P + DK +K
Sbjct: 234 WIEFWSDAASDRRRRVSSSSEASTASSSSSSSGCPSPPPRSTP-LWVDNYLDKLGSVLKK 292
Query: 393 VGW 385
GW
Sbjct: 293 GGW 295
>06_01_0290 + 2122758-2123015,2123128-2123544
Length = 224
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -3
Query: 525 AGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATGEMKSVGWTSLLMLTRPM--V 352
A T ++ +CSPGSP +S + SG D A ++ G L L++ V
Sbjct: 14 AATAAEDERFACSPGSPVSSGSGKRGSGSGSGDEVDDAGCDVGGGGARKKLRLSKDQAAV 73
Query: 351 SEGCRRT 331
E C +T
Sbjct: 74 LEECFKT 80
>03_05_0781 +
27654764-27655429,27655902-27656004,27656535-27656590,
27656895-27657059,27657078-27657083,27657657-27657770,
27658170-27658262
Length = 400
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 525 AGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLAD 418
A DT++++S SP + PKP+ D+ + SL D
Sbjct: 58 ASHPDTARRVSVSPAAVEPPPKPRALLDAIKRSLLD 93
>11_01_0300 +
2253957-2254245,2254783-2254850,2254967-2255098,
2255811-2255969,2256124-2256489
Length = 337
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 513 DTSKQLSCSPGSPSTSPKPQTFP--DSGRSSLADKATGEMKSVG 388
+ +K+ SP SPSTSP P P SG A AT M S+G
Sbjct: 35 EAAKEYQSSPSSPSTSPTPSPPPVAASGHGGEA-AATPTMWSLG 77
>10_08_0957 +
21801347-21801710,21802319-21802649,21803052-21803112,
21803266-21803334,21803631-21803846,21804012-21804071
Length = 366
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 262 PFHLGPLWSGGGN*PVPGHGD*RSPSAPLGYHWSRQHQQGC 384
P H P W G P P HG R+ + Y +SR +GC
Sbjct: 58 PQHQAPGW---GPPPPPAHGRKRAVICGISYKFSRHELKGC 95
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 471 STANLESN*AASTCPWCPPTVSLRPPARKARLPST 575
S++N++SN S+ P P SL PPA+ L +T
Sbjct: 290 SSSNVDSNVTKSSGPLVVPPTSLPPPAQPETLATT 324
>03_05_0267 - 22538631-22539452
Length = 273
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Frame = -3
Query: 492 CSPGSPSTSPKP---QTFPDS---GRSSLADKATGEMKSVGW---TSLLMLTRPMVSEGC 340
CSP SP SP P +T P S R A + T +GW + ++ L RP+V C
Sbjct: 183 CSPSSPPASPSPSPARTSPPSSSPSRGCSARRPTPSPPVLGWVIPSVVVALLRPLV---C 239
Query: 339 RRTALVS 319
A++S
Sbjct: 240 DADAVIS 246
>10_08_0485 +
18235597-18236256,18236353-18236400,18236522-18236644,
18237062-18237211,18237702-18237873,18237965-18238025,
18238129-18238237
Length = 440
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = +1
Query: 79 CSGTGAQHRCAKYQRPGCP----RRQALPGPSTHRCFD 180
C GTGA C RPG RR+A P PS D
Sbjct: 56 CVGTGADVECYVDDRPGAEVGPIRREATPPPSPQDAVD 93
>04_04_0179 - 23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 28.3 bits (60), Expect = 4.6
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 4/168 (2%)
Frame = -3
Query: 555 SSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATGE-MKSVGWTS 379
SSL A R A + + S+ + C+P S P P+ S R + + T + ++ +
Sbjct: 792 SSLSAERVGIAKSVERSENIDCTPVSRIEVP-PKVQHSSSRKTPSSVLTAQSLRKFRDSE 850
Query: 378 LLMLTRPMVSEGCRRTALVSVTRDGLITTTRP*RTQMKRTSWRQLAALRTQRE*MR-EPA 202
+P V E +T L S T+ + +T K T R + + R E
Sbjct: 851 ENRSAKPSVRESMTKTRLDSATK----PPQKEEQTANKNTGTRVRSEAKIPRNISDIENE 906
Query: 201 QVLSRPLVETAMRRWTW*GLSPRATRALVLCTPV--LRPCTRARPHNS 64
S P + + W S R ++++ L V + P T +P S
Sbjct: 907 FANSEPTFHSNRKAWKLPPQSTRQSQSIDLRASVREMEPLTEGKPRRS 954
>03_05_0413 -
24002534-24002585,24003185-24003305,24003678-24003871,
24005359-24005651
Length = 219
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 393 VGWTSLLMLTRPMVSEGCRRTALVSVTRDG 304
VGW + + +++E C+ ALV V+ DG
Sbjct: 102 VGWPPVRSFRKNVLAEKCKAAALVKVSMDG 131
>11_06_0064 + 19733643-19734056
Length = 137
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 226 LGPQRR*LPPRCPFHLGPLWSGGGN*PVPGHG 321
+G RR LPP C L LW G GHG
Sbjct: 41 IGDTRRLLPPGCSCCLSSLWHGSST--AGGHG 70
>10_07_0100 + 12861588-12862601
Length = 337
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +3
Query: 315 SRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNPEMSAALAKSTANLESN 494
S R + +P L S ++ S S+ C P YP P S A S+++
Sbjct: 154 SARACRRPASPGARLASLLNSIFSGKRPSAQRPACSP--DYPEPACSTAPPSSSSSYARR 211
Query: 495 *AASTCPWCPPTVSLRPPARKAR 563
+ P PPT + AR +R
Sbjct: 212 PCHAKTPRTPPTTTTTARARPSR 234
>09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219
Length = 215
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 193 EQTTGRNSDA*MDLVGLVSEGNQGVGTLHT-GAAPLYQSKTAQ*YKR 56
+Q +G ++++ MDL G+ +EGN + + T G P Y Y R
Sbjct: 4 QQASGADAESGMDLDGVTTEGNTALHVVATCGDGPGYLRSAGVIYSR 50
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 27.9 bits (59), Expect = 6.1
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +3
Query: 342 TPRIPLVSSASTGMSNPLTSS-LPWLCLP--ARTYPNPEMSAALAKSTANLESN*AASTC 512
+PR+ SS ++ S+PL S+ P + + A +P + A ST AS
Sbjct: 41 SPRLLFFSSTASSSSSPLLSTGSPSVAVSPNANLSFDPSLIPTPAASTPPASPTANASPP 100
Query: 513 PWCPPTVS-LRPPARKARL 566
P PP LRPP ARL
Sbjct: 101 PSLPPPPPPLRPPPPPARL 119
>01_04_0056 + 15476868-15476896,15477581-15478259
Length = 235
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -3
Query: 567 EVWPSSLVASRRPSAGTTD----TSKQLSCSPGSPSTSPKPQTFPDSGR 433
+ P+ L++ RP+A T T+ + +P + + +PKP T PD R
Sbjct: 50 DTMPNCLISLARPAAPTLPHSHLTNPRHPATPTATAATPKPNTPPDPTR 98
>10_03_0006 +
6929237-6929304,6929581-6929603,6929609-6929710,
6929752-6930207,6930237-6930538,6930628-6930717,
6931379-6931471
Length = 377
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 151 PGPSTHRCFDQWSAQHLRRFPHSLSLG 231
P PS H + W Q L RF H G
Sbjct: 39 PSPSLHHIYLAWQIQGLARFHHGSPFG 65
>06_02_0234 + 13319390-13320217
Length = 275
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 379 PVDADETNGIRGVQTDCASLRDQGRVNYHHQTITDPDETDILEAASGAEDPA 224
P+ A E IR + L + +H+ + +PD+ D+L A GA D A
Sbjct: 32 PLTATEITAIRAAVL-ASPLVPARPLFFHYVGLDEPDKPDVLSYAYGAADAA 82
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 538 KETVGGHHGHVEAAQLLSRFAVDFAKAADISGFG*VLAGRQSHGRDE-VSGLDI 380
++++GG G + + L R + FA AD+ LAGRQ+ E + LDI
Sbjct: 404 EDSLGGGQG-TQRRERLFRVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDI 456
>03_05_0880 -
28450248-28450458,28451911-28452013,28452135-28452280,
28452629-28452801,28453267-28453539
Length = 301
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 309 PWSRRLAQSVCTPRIPLVSSASTGMSNPLTS 401
PWS A+ +C V +A GM PLT+
Sbjct: 9 PWSGAGAEPICGDAAAAVVAARKGMETPLTA 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,874,830
Number of Sequences: 37544
Number of extensions: 493005
Number of successful extensions: 2220
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2216
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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