Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c23f
(575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 45 4e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 41 8e-04
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 40 0.002
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 40 0.002
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.010
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.010
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.010
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 35 0.041
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 35 0.041
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 35 0.055
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 35 0.055
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 35 0.055
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.072
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.13
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 33 0.13
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 33 0.13
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.17
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 33 0.22
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.29
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_50121| Best HMM Match : DoxX (HMM E-Value=1.6) 32 0.39
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 32 0.39
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_59013| Best HMM Match : DoxX (HMM E-Value=1.6) 32 0.39
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 31 0.51
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.51
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_6689| Best HMM Match : CBM_5_12 (HMM E-Value=8.9) 31 0.89
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.2
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.6
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 30 1.6
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 30 1.6
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.6
SB_20552| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_29783| Best HMM Match : PA14 (HMM E-Value=5e-05) 29 2.1
SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_10369| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_58630| Best HMM Match : IncA (HMM E-Value=0.5) 29 3.6
SB_24040| Best HMM Match : Extensin_2 (HMM E-Value=0.009) 29 3.6
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.6
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 29 3.6
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 29 3.6
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 4.8
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 28 4.8
SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5) 28 6.3
SB_40675| Best HMM Match : DUF572 (HMM E-Value=1.2) 28 6.3
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 28 6.3
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_46026| Best HMM Match : Collagen (HMM E-Value=0.00013) 27 8.3
SB_34520| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 27 8.3
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 27 8.3
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +2
Query: 68 LCGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAAS 247
+CG++ R G + N GD P+Q LR +T+G C GSLIHS WVL+AA
Sbjct: 381 VCGVSSSTSRIVGGAAANP----GDWPWQAQLR---TTTGF-PYCGGSLIHSNWVLTAAH 432
Query: 248 CLQDVR 265
C+ R
Sbjct: 433 CISSKR 438
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 41.1 bits (92), Expect = 6e-04
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Frame = +2
Query: 137 GDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQD-----VRFIWVRYGLVVVI 301
G+ P+QV +++ ++S L + C G++I WVL+AA C+QD ++ + L V
Sbjct: 555 GEWPWQVSMKL--NSSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTMGEWRLFNVD 612
Query: 302 NPSLVTETSAVRLHPS---DTI----GLVSINRDVQPTDFISPVALSASEDLPESGNVC 457
V + H + +T+ L+ + R + T ++ PV L S D P +G +C
Sbjct: 613 GTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDS-DFP-AGTLC 669
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 137 GDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQDVR 265
GD P+Q LR STSG C GSLIH +WVL+A C+ R
Sbjct: 673 GDWPWQAQLR---STSGF-PFCGGSLIHPQWVLTATHCVSSRR 711
Score = 32.3 bits (70), Expect = 0.29
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Frame = +2
Query: 164 RIAVSTSGLLNTCAGSLIHSRWVLSAASCL---QDVRFIWVRYGLVVVINPSLVTETSAV 334
+IA+ SG C GSL+ WV++AA C+ V G + +P +T V
Sbjct: 82 QIALERSGSF-ICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDV 140
Query: 335 -RLHPSDTIGLVSINRDVQPTDFISPVALSASEDLPESGNVC---GFGEVDGEPGEQLSC 502
R+ T ++ D+ + SPV LS G+ C G+G++ PG
Sbjct: 141 KRIITHPTYNSPQLSNDIALIELSSPVPLSDRGHQVSVGSKCFITGWGKI-RHPGGSHHI 199
Query: 503 FDVSVVP 523
+++P
Sbjct: 200 LQQAMMP 206
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQDVR 265
P+Q+ LR+ + C GSLI S WVL+AA C+ +R
Sbjct: 50 PWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIR 89
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +2
Query: 41 KMKVLSFVLLCGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLIH 220
+ ++L+F+ CG R G ++ +PY +++VS G L++C G+LI
Sbjct: 458 RQRLLNFLADCGRRPPMSRVIGGEAA--------RPYSWPWQVSVSM-GKLHSCGGALIS 508
Query: 221 SRWVLSAASCLQDVRF 268
S+WV++AA C+ + F
Sbjct: 509 SKWVITAAHCVIEYPF 524
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQD-----VRFIWVRYGLVVVIN-P 307
P+Q+ LR+ +G + C GSLI WVL+AA C++D I R +
Sbjct: 93 PWQISLRV----NGR-HICGGSLITPEWVLTAAHCVEDFPHPSAHRIKERSAIQQEFRLT 147
Query: 308 SLVTETSAVRLHPSDTIGLVSINRDVQPTDFISPVALSASEDLPESGNVC---GFGEV-- 472
L H + + L+ ++ +QP+D ++ V L + G C G+G +
Sbjct: 148 KLFKHKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVG 207
Query: 473 DGEPGEQL 496
G+P E L
Sbjct: 208 GGQPSEIL 215
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQDVR 265
P+Q LR A G C GSLIH WVL+AA CL++ +
Sbjct: 272 PWQAMLRSA----GGSQFCGGSLIHPEWVLTAAHCLENTQ 307
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 137 GDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQDVR 265
G+ P+Q L G C G+L+H WV++A+ C+ D+R
Sbjct: 220 GEWPWQAMLMFQTPL-GYKQFCGGALVHEDWVVTASHCINDIR 261
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQDVR 265
P+Q LR A G C GSLIH WVL+AA CL++ +
Sbjct: 232 PWQAMLRSA----GGSQFCGGSLIHPEWVLTAAHCLENTQ 267
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCL 253
P+Q+ LR SG +TC GSLI RWV++AA C+
Sbjct: 118 PWQISLR---GRSGF-HTCGGSLISDRWVVTAAHCI 149
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAA 244
P+Q+ LR SG +TC GSLI RWV++AA
Sbjct: 441 PWQISLR---GRSGF-HTCGGSLISDRWVVTAA 469
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 137 GDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQ 256
GD P+Q LR +TSG C GSLI +W+L+A C++
Sbjct: 20 GDWPWQAQLR---TTSGF-PYCGGSLIAPQWILTATHCVE 55
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 71 CGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASC 250
CG+ + G S + G P+QV +I T G + C GS+++S+W+++AA C
Sbjct: 1770 CGIRPIVGSSLQQIVGGKVTEHGAWPWQV--QIGYKTMG--HICGGSIVNSQWIVTAAHC 1825
Query: 251 L 253
+
Sbjct: 1826 V 1826
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCL 253
P+QVHL + L+ C G+LI WV++AA C+
Sbjct: 56 PWQVHL-LQSRDGSFLHKCGGALIDREWVVTAAHCV 90
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCLQDVR 265
CAGSLI +RW+++A C +D R
Sbjct: 79 CAGSLIEARWIITAGHCFKDPR 100
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCL 253
P+Q LR +TSG C GSLIH +W+L+A C+
Sbjct: 66 PWQAQLR---TTSGF-PYCGGSLIHPQWILTATHCV 97
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 34.3 bits (75), Expect = 0.072
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 68 LCGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAAS 247
+CG+ GR G Q+ + D P+Q L+ + + + C GSLI+ WV++AA
Sbjct: 423 ICGVRNALGRIVGGQTAK----VEDWPWQAGLKKGLDDTIV---CGGSLINREWVVTAAH 475
Query: 248 CL 253
C+
Sbjct: 476 CI 477
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 33.9 bits (74), Expect = 0.096
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Frame = +2
Query: 134 LGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCL--QDVRFIWVRYGLV---VV 298
LG+ P+Q L V+ G + C GSLI +WVL+A C+ +D V G V
Sbjct: 70 LGEWPWQAWLH--VTPHGFV--CGGSLIAPQWVLTAGHCILTEDPEKYRVVLGDVDRDTT 125
Query: 299 INPSLVTETSAVRLHP--------SDTIGLVSINRDVQPTDFISPVALSASED-LPESGN 451
+ + HP + + L+ ++R T F++ V L A E+ +PE N
Sbjct: 126 EGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQLSRPAFVTSFVNTVCLPAQEEKVPEDRN 185
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 33.5 bits (73), Expect = 0.13
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 3/132 (2%)
Frame = +2
Query: 71 CGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASC 250
CG V S+ + ++ + H + C GSL+ W+++AA C
Sbjct: 23 CGKRFVPPSSSTASACRRIMGGQRSTIEQHPWMVAMMLDSAQACGGSLVPEDWIVTAAHC 82
Query: 251 LQDVRFIW-VRYGLVVVINPSLVTETSAVRLHPSDTIGLVSINRDVQPTDF-ISPVALSA 424
R W V G + T SA+ HP + S+ + P D+ ++ V L
Sbjct: 83 FDSNRLRWRVVAGNDMPSKAVNTTGVSAIWRHPQYKSNIASL--ESGPCDYDVALVKLEK 140
Query: 425 S-EDLPESGNVC 457
S P++ +C
Sbjct: 141 SVATTPKTVPIC 152
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 131 ALGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQD 259
A+G+ P+QV L + C G+L+ S WVL+AA C +D
Sbjct: 265 AVGEWPWQVSLYLTHYGP----VCGGTLLTSEWVLTAARCFRD 303
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 33.5 bits (73), Expect = 0.13
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 300 LTRPWSRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNP-EMSAALAKST 476
LT P S + S T PL SS+ S+PLTSS P T P+P S+ L S+
Sbjct: 185 LTSP-SPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSS 243
Query: 477 ANLESN*AASTCPWCPPTVSLRP 545
S+ S+ P P+ P
Sbjct: 244 PLTSSSPLTSSSPLTSPSPLTSP 266
Score = 33.1 bits (72), Expect = 0.17
Identities = 34/110 (30%), Positives = 47/110 (42%)
Frame = +3
Query: 117 PTPWLPSETSPTRSIYASLFRPVVCSTPAPVPSFTLAGSSAPLAAXXXXXXXXXXXXXXX 296
P+P L S + T S + L P ++P+P+ S + SS+PL +
Sbjct: 170 PSP-LTSSSPLTSS--SPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSP 226
Query: 297 XLTRPWSRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNP 446
LT P S T PL SS+ S+PLTSS P T P+P
Sbjct: 227 -LTSP-------SPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSPSP 268
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 KMKVLSFVLLCGLALVQGRSTGVQSTNALVALGD--KPYQVHLRIAVSTSGLLNTCAGSL 214
K+ V+ V G + V + G + A V G +P+ +I++ G ++C G+L
Sbjct: 2 KIVVVLLVACLGPSFVDA-ACGRKPPGARVINGQNAQPHSWPWQISLRPYGRYHSCGGTL 60
Query: 215 IHSRWVLSAASCL 253
I RWV++A+ C+
Sbjct: 61 ISDRWVVTASHCV 73
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 LSFVL-LCGLALVQGRSTGVQSTNALVALGDK--PYQVHLRIAVSTSGLLNTCAGSLIHS 223
++FVL + G+A + S G + + GD+ P+ ++++ G + C GSL+
Sbjct: 5 IAFVLCVLGVAPSEASSCGRRPDGVRIVGGDEAVPHSWPWQVSIRLKGS-HICGGSLLSP 63
Query: 224 RWVLSAASCL 253
W+L+AA C+
Sbjct: 64 LWLLTAAHCV 73
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCLQ 256
C+G+L+ RWV++AASCL+
Sbjct: 52 CSGALVSPRWVVTAASCLK 70
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 71 CGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASC 250
CG A V + + AL LG+ P+Q L + +G + C GSL+ WVL+AA C
Sbjct: 22 CGRAEVPATRV-ISGSEAL--LGEWPWQAWLHL--QHTGFI--CGGSLVAPGWVLTAAHC 74
Query: 251 L 253
+
Sbjct: 75 I 75
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 62 VLLCGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSA 241
V L G + S + T A A D P+Q + I V S + C G+LI + WV++A
Sbjct: 271 VTLSGFTSEEPMSRIIGGTTA--APHDWPWQAQILIHVDKSWN-HRCGGTLIDTEWVVTA 327
Query: 242 ASCL 253
A C+
Sbjct: 328 AHCV 331
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 143 KPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQD 259
+P+ +I++ + C G+LI RWV++A+ C+ D
Sbjct: 853 QPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHCIHD 891
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCL 253
P+Q+ LR+ + C G+LI WVL+A C+
Sbjct: 448 PWQISLRVRGK-----HMCGGTLISPDWVLTAGHCV 478
>SB_50121| Best HMM Match : DoxX (HMM E-Value=1.6)
Length = 338
Score = 31.9 bits (69), Expect = 0.39
Identities = 24/91 (26%), Positives = 33/91 (36%)
Frame = +3
Query: 303 TRPWSRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNPEMSAALAKSTAN 482
T P R +S+ S T +PLT + L + N E+ A +
Sbjct: 58 TLPAGHRTTESIMETINHAKSQILTAKLDPLTGKIV-LVFTGIVFLNAELCALFGLEAKD 116
Query: 483 LESN*AASTCPWCPPTVSLRPPARKARLPST 575
+ AS CPW P +S PP ST
Sbjct: 117 DQMGGRASYCPWGIPHLSAHPPQTPTAPAST 147
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 137 GDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASC 250
G P+QV + + + C G+LI+ WVL+AA C
Sbjct: 136 GTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -1
Query: 197 C*ADHWSKQRCVDGPGRA-CLRGQPGRWYFAHRCCAPVPEQDRTIVQKIEPSSCERVR 27
C H S C GP + CLR PG YF H C PE T V + + R R
Sbjct: 964 CKPCHVSCNAC-RGPAKGDCLRCNPGHVYFKHTCVTECPE--GTFVDDSDGADARRCR 1018
>SB_59013| Best HMM Match : DoxX (HMM E-Value=1.6)
Length = 338
Score = 31.9 bits (69), Expect = 0.39
Identities = 24/91 (26%), Positives = 33/91 (36%)
Frame = +3
Query: 303 TRPWSRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNPEMSAALAKSTAN 482
T P R +S+ S T +PLT + L + N E+ A +
Sbjct: 58 TLPAGHRTTESIMETINHAKSQILTAKLDPLTGKIV-LVFTGIVFLNAELCALFGLEAKD 116
Query: 483 LESN*AASTCPWCPPTVSLRPPARKARLPST 575
+ AS CPW P +S PP ST
Sbjct: 117 DQMGGRASYCPWGIPHLSAHPPQTPTAPAST 147
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCLQDVRF--IWVRYG 286
C G+L+H RWV++A+ C+ + ++VR G
Sbjct: 275 CGGTLVHPRWVVTASHCVHKLTTGDLYVRMG 305
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCL 253
P+Q+ LR T+G + C GSLI WVL+AA C+
Sbjct: 50 PWQISLR----TNGQ-HICGGSLITPEWVLTAAHCV 80
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 31.5 bits (68), Expect = 0.51
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 158 HLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQDVRFIWV 277
H ++ + +G + C GSLI +WV+++ C + ++
Sbjct: 547 HAQVDLVVNGTRHNCGGSLIDKQWVVTSGHCFDQRPYAYI 586
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 31.1 bits (67), Expect = 0.67
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +2
Query: 32 LSRKMKVLSFVLLCGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGS 211
LS K L V CG G S V NA P+Q+ LR+ +G + C GS
Sbjct: 9 LSLSTKALLEVRACGKR-PYGTSRVVNGDNA--QQHSWPWQISLRV----NGR-HICGGS 60
Query: 212 LIHSRWVLSAASCL 253
LI WV++AA C+
Sbjct: 61 LIAKDWVVTAAHCV 74
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 30.7 bits (66), Expect = 0.89
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 25/122 (20%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASC--------LQDVRFIWVRYGLVVVINPS----LVTETSAVRLH 343
C GSLI +WVL+AA C L RF V+ GL P+ + S +R H
Sbjct: 133 CGGSLISEKWVLTAAHCVTHRNGNILPRSRF-QVQLGLYRTTLPNEPQVQLRNISEIRTH 191
Query: 344 P-------SDTIGLVSINRDVQPTDFISPVALSASEDL------PESGNVCGFGEVDGEP 484
P + L+ ++ + ++++ P+ L ++D + G G+G+ G
Sbjct: 192 PQFDHVLFDADLALIKLDGEAIISEYVRPICLPETDDQASLISPSKFGMAVGWGKTVGRQ 251
Query: 485 GE 490
G+
Sbjct: 252 GD 253
>SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 37 SQDEGSIFCTIVRSCSGTGAQH--RCAKYQRPGCPRRQA 147
S+D +++C+IVR S T QH C + P PR+ A
Sbjct: 692 SEDLVTVYCSIVRQPSSTPLQHGPHCRSFVSPEFPRKLA 730
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 30.7 bits (66), Expect = 0.89
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCL 253
C G+L+H +WV++AA C+
Sbjct: 166 CGGTLVHPQWVITAAHCV 183
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 170 AVSTSGLLNTCAGSLIHSRWVLSAASC 250
A+ +G + C GS+I S+WV++AA C
Sbjct: 43 ALFLNGTHHRCGGSVIKSQWVVTAAHC 69
>SB_6689| Best HMM Match : CBM_5_12 (HMM E-Value=8.9)
Length = 514
Score = 30.7 bits (66), Expect = 0.89
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 377 RDVQPTDFISPVALSASEDLPESGNVCGFGEVD-GEPGEQLSCFD-VSVVPADGLLEATS 550
RD+ T I+ + D+ + G+VC E++ +P + F V PA+ L+ T
Sbjct: 112 RDLGGTGVIALKPVVRGPDINDDGSVCASAELEMVDPDRRYRLFTVVGKAPAEPLVPITE 171
Query: 551 EEGQT 565
EEG++
Sbjct: 172 EEGRS 176
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 558 PSSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQT 451
PS+ PSA +T ++ C+P +PST P T
Sbjct: 57 PSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPSTPST 92
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 337 TDCASLRDQGRVNYHHQTITD--PDETDILEAASGAEDPARVNEGTGAGVEQTTGRNSDA 164
+D +S RD+ R + H+ +TD P D A S D A N+GT Q++ + A
Sbjct: 807 SDSSSSRDRKRKHRHNDDVTDKKPRLVDYSSADSSDHDNAADNKGTEPRTSQSSATKNRA 866
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 137 GDKPYQVHLRIAVSTSGLLNT--CAGSLIHSRWVLSAASCL 253
G P+QV L S NT C G+LI WVL+AA C+
Sbjct: 1170 GGYPWQVALEFDTFQSNY-NTFHCGGTLIAEDWVLTAAHCV 1209
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASC 250
C G+L+H RWV++ A C
Sbjct: 54 CGGALVHERWVVTGAHC 70
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQDVRFIWV 277
P+QV L + +G + C GSLI +WV+++ C + ++
Sbjct: 262 PWQVDLVV----NGTRHNCGGSLIDKQWVVTSGHCFDQRPYAYI 301
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCL 253
P+Q LR S SG C G+L+H R+V++A+ C+
Sbjct: 36 PWQAQLR---SASGF-PFCGGTLVHPRFVVTASHCI 67
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = -3
Query: 528 SAGTTDTSKQLSCSPGSPSTS-----PKPQTFPDSGRSSLADKATGEMKSVGWTSLLMLT 364
SAG TDTS+Q + + S S P+P+ FP G S + + +S + + +
Sbjct: 554 SAGYTDTSRQFASADRSTVISAEYNDPRPRYFPTQGLSDSSPVESHGRQSTFFENKSLTA 613
Query: 363 RPMVSEGCRRT 331
R ++G R T
Sbjct: 614 RAFENKGWRGT 624
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCL 253
C GSL+ S WVL+AA C+
Sbjct: 340 CGGSLLSSTWVLTAAHCV 357
>SB_20552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 149 RACLRGQPGRWYFAHRCCAP 90
+AC+ G PGR F+H C P
Sbjct: 158 QACINGDPGRLSFSHAPCVP 177
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCL 253
C GSLI WVL+AA CL
Sbjct: 57 CGGSLIDPGWVLTAAHCL 74
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 164 RIAVSTSGLLNTCAGSLIHSRWVLSAASCL 253
+IA+ + G C GSL+ S WV++AA C+
Sbjct: 491 QIALKSRGNF-ICGGSLVSSTWVVTAAHCV 519
>SB_29783| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1395
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 470 VDGEPGEQLSCFDVSVVPADGLLEATSEEGQ 562
V G+ GE++ + V VVP DG+L EG+
Sbjct: 1195 VPGKRGEKVDAYKVPVVPLDGVLNGHPLEGK 1225
>SB_47549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 516 TDTSKQLSCSPGSPS--TSPKPQTFPDSGRSSLADKATGEMKS 394
+DTSKQ SP SPS T+P P +F D RS A A E S
Sbjct: 146 SDTSKQTVPSPLSPSKATTPLPLSFDDFMRSK-ATAAQQEFNS 187
>SB_10369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/75 (26%), Positives = 28/75 (37%)
Frame = +3
Query: 303 TRPWSRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNPEMSAALAKSTAN 482
T P A+S+ S T +PLT + L + N E+ A +
Sbjct: 58 TLPAGHHTAESIVETINHAKSQILTAKQDPLTGKIV-LVSTGVVFLNAELCALFGLEAKD 116
Query: 483 LESN*AASTCPWCPP 527
+ AS CPW PP
Sbjct: 117 DQMGERASQCPWGPP 131
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 164 RIAVSTSGL-LNTCAGSLIHSRWVLSAASC 250
++A++ SG + C G+LI + WVL+AA C
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHC 1282
>SB_58630| Best HMM Match : IncA (HMM E-Value=0.5)
Length = 307
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/91 (25%), Positives = 32/91 (35%)
Frame = +3
Query: 303 TRPWSRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNPEMSAALAKSTAN 482
T P A+S+ S T +PLT + L + N E+ A +
Sbjct: 25 TLPAGHHTAESIVETINHAKSQILTAKQDPLTGKIV-LVSTGVVFLNAELCALFGLEAKD 83
Query: 483 LESN*AASTCPWCPPTVSLRPPARKARLPST 575
+ AS PW P +S PP ST
Sbjct: 84 DQMGSGASQYPWGSPHLSAHPPQTPTAPAST 114
>SB_24040| Best HMM Match : Extensin_2 (HMM E-Value=0.009)
Length = 530
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +3
Query: 195 TPAPVPSFTLAGSSAPLAAXXXXXXXXXXXXXXXXLTRPWSRRLAQSVCTPRIPLVSSAS 374
T AP+P+ ++ +SAP+ +T ++ V + IP++S
Sbjct: 340 TSAPIPTISMGVTSAPIPIISMGVTSAFIPIISMGVTSAPFPIISMGVTSAPIPIISMGV 399
Query: 375 TGMSNPLTS 401
T S P+ S
Sbjct: 400 TSASIPIIS 408
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCLQDVR 265
C G+L+ +WV++AA C+ V+
Sbjct: 377 CGGTLVSPQWVVTAAHCVDHVK 398
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -3
Query: 558 PSSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATGEMKSVGWTS 379
P + AS +A T T+ + +P + +T+P+ T P++ +SLA A T+
Sbjct: 671 PEATTASLLTTAPETTTASLATTAPEA-TTAPEATTAPEATTASLATTA-----PEATTA 724
Query: 378 LLMLTRPMVSEGCRRTALVSVTRDGLITT 292
L T P + T T L+TT
Sbjct: 725 SLATTAPETTTASLATTAPETTTASLVTT 753
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 79 CSGTGAQHRCAKYQRPGCPRRQALPGPSTHRCFDQW 186
CS Q A+ Q P C +AL PSTH+ F Q+
Sbjct: 90 CSNCFTQGLNARDQSPRCITCRALAAPSTHKDFLQY 125
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 28.7 bits (61), Expect = 3.6
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Frame = +2
Query: 146 PYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQ---DVRFIWVRYGLVVVINP--S 310
P+Q+ LR+ S + C SL+ W L+AA C+Q + + G +N +
Sbjct: 98 PWQLSLRVYGS-----HNCGASLLSPGWALTAAHCVQRSSNPADYTLAAGAHRRVNDAHA 152
Query: 311 LVTETSAVRLHPSDTIG-------LVSINRDVQPTDFISPVALSASEDLPESGNVCGFGE 469
V S V H ++G L+ ++ VQ +D I + L A D +G C E
Sbjct: 153 QVLRVSQVISHKEFSMGHLRNDVTLLRLSAPVQLSDKIGTICLPAHGDRAPAGGHCYISE 212
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 137 GDKPYQVHLRIAVSTSGLLNTCAGSLIHSRWVLSAASCLQD 259
G P+QV L + SG C G+L+ WV++AA C+ D
Sbjct: 640 GAWPWQVML---IYNSGR-QFCGGTLVTPEWVITAAHCVVD 676
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 486 PGSPSTSPK--PQTFPDSGRSSLADKATGEMKSVG 388
P S ++SP P+ P S S +K +GE KSVG
Sbjct: 91 PSSNTSSPNLHPEFIPLSSEKSQENKPSGEFKSVG 125
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 53 LSFVLLCGLALVQGRSTGVQSTNALVALGDKPYQVHLRIAVSTSGLLNTCAGSLI 217
LSF + + ++ + S N+ +AL D+P H R+ VS + +N S+I
Sbjct: 830 LSFYSITCIGRLRAAKIEMDSVNS-IALSDQPQDTHARLLVSANIGINASGQSVI 883
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 513 PWCPPTVSLRPPARKA 560
PWCPP + L P RKA
Sbjct: 312 PWCPPCMRLLPEYRKA 327
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -3
Query: 531 PSAGTTDTSKQLSCSPGSPSTSPKPQTFP 445
P TT T Q S SP P+TS +PQT P
Sbjct: 244 PIGPTTSTQHQTS-SPIGPTTSTQPQTSP 271
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -3
Query: 528 SAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGRSSLADKATGEMKSVGWTSLLMLTRPMVS 349
+ G T ++K SP P+TS +PQT G ++ T +VG T+ T+P S
Sbjct: 90 AVGHTTSTKPQKSSPIGPTTSTQPQTSSTVGHTTSTQPQTS--STVGHTT---STKPQTS 144
>SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5)
Length = 722
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 477 PSTSPKPQTFPDSGRSSLADKATGEMK 397
P SP +T DS +SSL ++ G+M+
Sbjct: 111 PWNSPPQETIRDSSKSSLVSRSEGQMR 137
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 477 PSTSPKPQTFPDSGRSSLADKATGEMK 397
P SP +T DS +SSL ++ G+M+
Sbjct: 382 PWNSPPQETIRDSSKSSLVSRSEGQMR 408
>SB_40675| Best HMM Match : DUF572 (HMM E-Value=1.2)
Length = 929
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 477 PSTSPKPQTFPDSGRSSLADKATGEMK 397
P SP +T DS +SSL ++ G+M+
Sbjct: 825 PWNSPPQETIRDSSKSSLVSRSEGQMR 851
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 342 TPRIPLVSSASTGMSNPLTSSLPWLCLPARTYPNPEMSA-----ALAKSTANLESN*AAS 506
T +P +SA + P T++LP T PE +A AL K+TA E+ A
Sbjct: 200 TTSVPETTSAPENTALPKTTALPETTAAPETIAKPETTAPPETTALPKTTAVPETTAAPE 259
Query: 507 TCPWCPPTVSLR 542
T P T LR
Sbjct: 260 TTA-KPETTDLR 270
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 423 PARTYPNPEMSAAL-AKSTANLESN*AASTCPWCPPTVSLRPPARKA 560
P P P S L A +T NL +CP CPP V + P A K+
Sbjct: 265 PVTCPPCPASSGCLVAAATGNLTVTLVPPSCPPCPPPV-ICPKAPKS 310
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 555 SSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQTFPDS 439
+S AS + TT T+ S P +PS+SP T P S
Sbjct: 363 TSTTASSVATTVTTTTATSSSMLPNTPSSSPSTGTQPSS 401
>SB_46026| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 174
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 433 VLAGRQSHGRDEVSGLDIPVDADETNGIRGV 341
VL G + +G DE+ GLD DE G+ GV
Sbjct: 18 VLYGLKQYGLDELYGLDELYGLDELYGLDGV 48
>SB_34520| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 315 SRRLAQSVCTPRIPLVSSASTGMSNPLTSSLPWLCLP-ARTYPNPEMSAAL 464
S+ L+ CT P+ S T PW+C P ++T+ E++AA+
Sbjct: 9 SKPLSHVDCTAPAPVFPSYLTSSRLATGIPSPWMCAPSSQTHTADELAAAI 59
>SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14)
Length = 1774
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 168 MRRWTW*GLSPRATRALVLCTPVLRPC--TRARPHNSTKDRTFILRES 31
M RW + G R T + CT L P TR +NS ++T +LRES
Sbjct: 165 MLRWEYCGPDWR-TGLVPTCTEDLIPTNDTRINSYNSQTEQTCVLRES 211
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 27.5 bits (58), Expect = 8.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 200 CAGSLIHSRWVLSAASCLQDV 262
C GSL++ WV++A C ++
Sbjct: 79 CGGSLVNENWVVTARHCFHEL 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,397,514
Number of Sequences: 59808
Number of extensions: 509778
Number of successful extensions: 3017
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 2474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2971
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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