Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12c22r
         (709 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   2.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.7  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 196 SFLHWHYYFNIELLRKKN 249
           S  H+H Y N+  LRK++
Sbjct: 458 SISHYHLYTNLTALRKRD 475


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 395 RLFFSMDSVNHLTHDGS*ARPP 330
           R FF  DSV+H+  D     PP
Sbjct: 303 RYFFGRDSVDHVDFDEFLPPPP 324


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 127  FLKSSS*RIY*YKNVVGRNSQLISFLHWHYYFNIE 231
            F+ +S+ R+   KNV GR   +  F H H+   I+
Sbjct: 962  FIVNSNLRLTFSKNVQGRVGFVTPFEHRHFISGID 996


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 211 HYYFNIELLRKKNNYYIKWSIFIYSKDDRIEYVI 312
           +++FN E+L+K N+  I   +   +     EY+I
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKTSGKYKEYII 201


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 211 HYYFNIELLRKKNNYYIKWSIFIYSKDDRIEYVI 312
           +++FN E+L+K N+  I   +   +     EY+I
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKTSGKYKEYII 201


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 143 VEESINIKMLWGETLS*YLFCIGIIILILNYSEKKTITISNGQY 274
           +EE+ N+KM  G ++   +  I   I+  NYS K     ++ +Y
Sbjct: 176 IEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKNMREYNDPEY 219


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 467 ERWGSRCTIKLRIRTHA 417
           E +GS+ T++L I+TH+
Sbjct: 267 ETFGSKKTMELHIKTHS 283


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 143 VEESINIKMLWGETLS*YLFCIGIIILILNYSEKKTITISNGQY 274
           +EE+ N+KM  G ++   +  I   I+  NYS K     ++ +Y
Sbjct: 176 IEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMREYNDPEY 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,072
Number of Sequences: 438
Number of extensions: 4123
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)