Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12c22f
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    54   1e-09
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 53.6 bits (123), Expect = 1e-09
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
 Frame = +1

Query: 190 KTIYSLDLSYNNXXXXXXXXXXXXXX-MVELYLNRNHIVNLNCSLA--LPSLKKLDLSDN 360
           + I  LDLS+NN               +++LYL  N ++N    L   +P L+ LDLS N
Sbjct: 223 QNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHN 282

Query: 361 SISKIDGHVFDKLKNLEYLNLANNKFTSLDKLTFHRLTNLKEIVLDNNDIGEELRRV--N 534
           S+ ++D   F   K L++L+ ++N+ + +    F  L NL+ +   +N     LR +  N
Sbjct: 283 SLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHN----RLRSLPDN 338

Query: 535 LFDRSGL 555
           LF  +GL
Sbjct: 339 LFRETGL 345



 Score = 48.4 bits (110), Expect = 5e-08
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +1

Query: 268 MVELYLNRNHIVNL--NCSLALPSLKKLDLSDNSISKIDGHVFDKLKNLEYLNLANNKFT 441
           + E+Y + N + N+  +    L  L+++ L DN I  ++   F  LK+L+ LNL  NK  
Sbjct: 94  LTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIA 153

Query: 442 SLDKLTFHRLTNLKEIVLDNNDIGEELRRVNLFDRSG-LGL 561
           ++   TF  L  L+++ L  N I       N+FD+ G LG+
Sbjct: 154 TIAYETFQNLPELEDLDLAYNSISS--LDFNIFDQVGSLGM 192



 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +1

Query: 277 LYLNRNHI-VNLNCSLALPSLKKLDLSDNSISKIDGHVFDKLKNLEYLNLANNKFTSLDK 453
           L+LN +++ ++   +L+ P+L  L L+ NS+  +   V   + +L YLNL  N  +++  
Sbjct: 448 LHLNLDNVSLSQVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVPI 507

Query: 454 LTFHRLTNLKEIVLDNNDIGEELRRVNLFDRSGLGLTAKIRSLSIRGVXL 603
           +T H LT L+ + L+ N I        L + S LG   ++  L+++ + L
Sbjct: 508 VT-HSLTELRHLSLEGNPI------TTLSNTSLLGAANQLEELNLKNIDL 550



 Score = 38.3 bits (85), Expect = 5e-05
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = +1

Query: 274 ELYLNRNHIVNL--NCSLALPSLKKLDLSDNSISKIDGHVF--DKLKNLEYLNLANNKFT 441
           EL L+ N + N+  N    L SLKK+ L DN+I  I    F  D  ++L  +  + N   
Sbjct: 46  ELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVR 105

Query: 442 SLDKLTFHRLTNLKEIVLDNNDIGEELRR 528
           ++ + TF  L  L++I LD+N I E L R
Sbjct: 106 NVQQHTFADLIQLEQIHLDDNRI-ESLER 133



 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = +1

Query: 322 ALPSLKKLDLSDNSISKIDGHVFDKLKNLEYLNLANNKFTSLDKLTFHRLTNLKEIVLDN 501
           +L +LK      +S+          L  LE L+L+NN+  ++   +FH L +LK++ L +
Sbjct: 16  SLLTLKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQD 75

Query: 502 NDI 510
           N I
Sbjct: 76  NTI 78



 Score = 31.5 bits (68), Expect = 0.006
 Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
 Frame = +1

Query: 139 VDCSHRNVDAKV-NLTLPKTIYSLDLSYN--NXXXXXXXXXXXXXXMVELYLNRNHIVNL 309
           VD SH  + +   NL     +  LD+S+N                 + EL L+ N I +L
Sbjct: 325 VDFSHNRLRSLPDNLFRETGLERLDVSHNLLGKLPLTSLSLASAQTLSELDLSWNSISSL 384

Query: 310 NCSLALPSLKKL---DLSDNSISKIDGHVFDKLKNLEYLNLANNKFTSLD--KLTFHRLT 474
           +    L   K L   DLS N + +ID   F  +  L  LNL +N   +L+   L+F  L 
Sbjct: 385 SHGGQLARFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGLE 444

Query: 475 -NLKEIVLDNNDIGE 516
             L  + LDN  + +
Sbjct: 445 YTLLHLNLDNVSLSQ 459


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 98   VTINTQIKTTWAKQSTAPTETWTPRSI*RYPK 193
            V I T  K   +  S + T +W P S   YP+
Sbjct: 1337 VDIVTTAKPAQSTTSVSTTTSWNPGSTTNYPE 1368


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 328 PSLKKLDLSDNSISKIDGH 384
           P L ++D+S+NS    D H
Sbjct: 4   PKLSQMDISENSTYLFDKH 22


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +1

Query: 364 ISKIDGHVFDKLKNLEYLNLANNKFTSLDKLTF 462
           I  ++GH    ++  EY++  +  F  L K+ +
Sbjct: 138 IKTLNGHEIKFIRKEEYISFESKVFHKLKKMKY 170


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 15  PSPPRNVTDFHFTIRLIRQFP 77
           P PP  V  F  T+R + + P
Sbjct: 733 PPPPPRVESFAETVRTVSKIP 753



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 275 STIVDESNIIDESIDVILLYDK 210
           S +  ES+++D   DVI + DK
Sbjct: 358 SQVQRESDVVDSLKDVIEIVDK 379


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 382 HVFDKLKNLEYLNLANNKFTSLDKLTFHRLTN 477
           + F   K +    L +N   +LDK+ +  LTN
Sbjct: 28  NTFYSNKEIFLRELISNSSDALDKIRYESLTN 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,778
Number of Sequences: 336
Number of extensions: 2474
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)