Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12c20f
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    26   0.84 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   1.5  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   5.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.9  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +1

Query: 331 HLLESRLSPRSSVGANVMELHLHISAGHQAVLHARL 438
           HL         S+G   M LH H   GH A LHA L
Sbjct: 329 HLSHLHQMSAMSMGMGSMGLHHH-HPGHHAALHAHL 363


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 317 YLHSLTCWSQDCHQ 358
           YLH L  W   CHQ
Sbjct: 549 YLHGLVSWGYGCHQ 562


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 234 LVKTARFKELAPYDPDWFYV 293
           +V   RF+++A   PDW +V
Sbjct: 161 VVSNDRFRDVASEHPDWAFV 180


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +3

Query: 6    RLPTQGKVCNFACPHGYSLNIRNIPLQ*NFL----NSKITIYF--CKMRSVTVKDVEQDK 167
            R   +GK C   CP     N R +P +   L    + +++++     ++   ++DV+ D 
Sbjct: 1605 RFVWRGKECYLPCPVQSVTNCRQLPRRGEILIFITSLRVSVWLEGVVVQETLLEDVKSD- 1663

Query: 168  IVKTVAAHLKKTGKV 212
              + +  HL +T ++
Sbjct: 1664 AERKLTLHLSRTAEI 1678


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,229
Number of Sequences: 2352
Number of extensions: 12292
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)