Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c20f
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 182 9e-46
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 182 9e-46
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 182 9e-46
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 182 9e-46
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 182 9e-46
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 181 2e-45
M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte adh... 31 3.2
M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte adh... 31 3.2
M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte adh... 31 3.2
BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial... 31 3.2
BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial... 31 3.2
BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial... 31 3.2
AY367062-1|AAQ67702.1| 138|Homo sapiens E-selectin protein. 31 3.2
AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial... 31 3.2
AL021940-5|CAI19360.1| 484|Homo sapiens selectin E (endothelial... 31 3.2
AL021940-4|CAI19359.1| 547|Homo sapiens selectin E (endothelial... 31 3.2
AL021940-3|CAI19357.1| 485|Homo sapiens selectin E (endothelial... 31 3.2
AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial... 31 3.2
AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial... 31 3.2
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 31 3.2
AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3... 30 7.5
AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3... 30 7.5
AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 30 7.5
AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3... 30 7.5
AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3... 30 7.5
AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3... 30 7.5
AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor typ... 30 7.5
AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR2... 29 9.9
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 182 bits (443), Expect = 9e-46
Identities = 85/134 (63%), Positives = 105/134 (78%)
Frame = +3
Query: 129 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 308
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 309 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 488
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 489 RILTTQGRRDLDRI 530
R LT QG+RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 182 bits (443), Expect = 9e-46
Identities = 85/134 (63%), Positives = 105/134 (78%)
Frame = +3
Query: 129 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 308
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 309 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 488
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 489 RILTTQGRRDLDRI 530
R LT QG+RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 182 bits (443), Expect = 9e-46
Identities = 85/134 (63%), Positives = 105/134 (78%)
Frame = +3
Query: 129 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 308
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 309 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 488
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 489 RILTTQGRRDLDRI 530
R LT QG+RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 182 bits (443), Expect = 9e-46
Identities = 85/134 (63%), Positives = 105/134 (78%)
Frame = +3
Query: 129 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 308
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 309 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 488
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 489 RILTTQGRRDLDRI 530
R LT QG+RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 182 bits (443), Expect = 9e-46
Identities = 85/134 (63%), Positives = 105/134 (78%)
Frame = +3
Query: 129 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 308
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 309 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 488
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 489 RILTTQGRRDLDRI 530
R LT QG+RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 181 bits (440), Expect = 2e-45
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +3
Query: 138 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 317
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 318 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 497
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 135
Query: 498 TTQGRRDLDRI 530
T QG+RDLDRI
Sbjct: 136 TPQGQRDLDRI 146
>M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>AY367062-1|AAQ67702.1| 138|Homo sapiens E-selectin protein.
Length = 138
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 74 PVFGTVCKFACPEGWTLN 91
>AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>AL021940-5|CAI19360.1| 484|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 484
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 384 PVFGTVCKFACPEGWTLN 401
>AL021940-4|CAI19359.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 447 PVFGTVCKFACPEGWTLN 464
>AL021940-3|CAI19357.1| 485|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 485
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 385 PVFGTVCKFACPEGWTLN 402
>AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 447 PVFGTVCKFACPEGWTLN 464
>AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 12 PTQGKVCNFACPHGYSLN 65
P G VC FACP G++LN
Sbjct: 510 PVFGTVCKFACPEGWTLN 527
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3
Query: 270 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 440
Y P R +LR P G + T + GGR+ G S CR G R+AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235
>AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor type 1
protein.
Length = 132
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT ++IR C GF +VG +++GRW
Sbjct: 93 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 123
>AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR25
protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 395 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 487
FT +++R C GF +VG +++GRW
Sbjct: 84 FTLTEIVRFRCQPGFVMVGSHTVQCQTNGRW 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,139,888
Number of Sequences: 237096
Number of extensions: 1820711
Number of successful extensions: 3643
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3643
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -