Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c19r
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1022 - 8815675-8816809,8819696-8819907 32 0.55
09_06_0047 + 20470756-20470817,20472927-20473833,20473932-20474555 31 0.96
03_05_0543 - 25404630-25405408,25405461-25405605 31 0.96
10_08_0224 - 15993497-15994075 27 1.0
06_03_0744 - 24098670-24098951 31 1.3
05_01_0141 - 937428-937717,938483-938705 30 2.2
01_06_1623 - 38716606-38717424 30 2.2
01_01_0256 - 2083973-2084816,2084922-2086093 30 2.2
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 29 3.9
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 29 3.9
05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330 29 3.9
04_04_0146 + 23106325-23108154 29 5.1
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 29 5.1
01_05_0619 - 23737178-23737378,23737460-23737516,23737597-237377... 29 5.1
07_03_1016 - 23313210-23313827,23314649-23314717 28 6.8
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 28 6.8
04_01_0417 - 5523911-5523976,5525131-5525321,5525807-5526044 28 6.8
02_04_0035 + 19078267-19078479,19078588-19078674,19079792-190798... 28 6.8
11_06_0717 - 26575009-26575152,26576461-26577978 28 9.0
10_02_0073 + 4940672-4940699,4941172-4941250,4941685-4941775 28 9.0
09_02_0140 + 4879319-4879968,4881443-4881942,4884230-4884368,488... 28 9.0
08_02_0410 - 16842306-16842950,16844994-16845182 28 9.0
06_03_1393 + 29846884-29847465 28 9.0
05_03_0649 - 16566815-16567392,16567491-16567623,16568000-165687... 28 9.0
05_02_0145 + 7067521-7068993 28 9.0
04_04_0690 - 27300048-27300929 28 9.0
03_05_0931 - 28912700-28913056,28913245-28913319,28913424-289134... 28 9.0
03_02_0796 - 11251958-11251971,11252220-11252301,11252420-112525... 28 9.0
03_01_0012 - 101584-101898,102274-102531,102932-103474 28 9.0
02_05_0100 - 25821606-25822349 28 9.0
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 28 9.0
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 28 9.0
>07_01_1022 - 8815675-8816809,8819696-8819907
Length = 448
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 361 NQFVGTWAWAAGYGRTSDASGSNTRK 284
N G+W WA G+GR +A+G N ++
Sbjct: 79 NYSEGSWVWAPGHGRRYNATGCNVKE 104
>09_06_0047 + 20470756-20470817,20472927-20473833,20473932-20474555
Length = 530
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3
Query: 169 GDSGGPLAFTYGGRRTLIGITSFGAAQCQRGHPAGFA 59
G GG L G RRTL+ T+ AA R H FA
Sbjct: 85 GTDGGLLLLQLGRRRTLVVSTAAAAADLYRNHDLAFA 121
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +3
Query: 39 EANEVTLAKPAGCPR*H*AAPNEVIPIRVRRPPYVKARGPPESPRQVLRPPWVFTQRVDA 218
EA +TL K P P+ V P ++PP + R PP +P +R P +R A
Sbjct: 103 EALTITLPKKTPSPLTPSPTPSPVTP-PPQQPPQPEPRRPPAAPLPGVRTPPSPPRRAPA 161
Query: 219 MTPLPKVRAQS 251
P P A S
Sbjct: 162 PAPAPLTPALS 172
>10_08_0224 - 15993497-15994075
Length = 192
Score = 26.6 bits (56), Expect(2) = 1.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 563 SAPGPPAVSRGHGASVAQQGGSAHGGAT 646
S G + GHGA GG GGAT
Sbjct: 52 SGSGYGVATSGHGAHAHSSGGGGGGGAT 79
Score = 23.0 bits (47), Expect(2) = 1.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 623 GSAHGGATVGQSNHHSG 673
G GG TVG S + SG
Sbjct: 120 GGGQGGGTVGSSGYGSG 136
>06_03_0744 - 24098670-24098951
Length = 93
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 488 IVSVNSESTSEELSGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQS 658
++++ +++ + +E++ A+ +A P A + G G A GG+A GGA S
Sbjct: 12 VLAIAFAASATAVLASESEAGGAAAAAAEPTAPAPGAGGEAAAAGGAAAGGAAAATS 68
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 554 ASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHHSG 673
A+ +A G +S GHG GG HGG G HH G
Sbjct: 91 AAAAAYGAHKLSHGHGHGGYGYGGH-HGGLFGGHHGHHGG 129
>01_06_1623 - 38716606-38717424
Length = 272
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 421 RVGYTNVIQPIFLPPSHLLNNQFVGTWAWAAGYGRTSDASGS 296
R+ Y N P ++ H++ Q +G W W + DA+G+
Sbjct: 221 RIRYANDRIPPYIVSRHVVPVQILGIWVWDESQSQYVDANGA 262
>01_01_0256 - 2083973-2084816,2084922-2086093
Length = 671
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 692 RXSSTSCRYGDYSDRRSHLHVRSLPAEPHSLRDRGSLLEDQERSRT 555
R ++TS G S R S + + PA+P S GSLL+D +S +
Sbjct: 142 RIAATSS--GGGSSRTSRIRLFLFPAKPESSSSLGSLLDDSSKSES 185
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 500 NSESTSEELSGAETQ---LKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHH 667
+ E EEL+ + + ++R S S PP+ + G S+ GG G NHH
Sbjct: 83 DDEDADEELAASAPRYPPVQRRSPSTAPPPSPPQPSGGGGHHHSSSSSGGGGGGYHNHH 141
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +2
Query: 23 SSTYPRSERGDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVH 202
SST+ E DPG L A+ D D A + ++EG G G++ P
Sbjct: 2 SSTHVAVEAPDPGGDG-----GLGEARLVDADAAAAPAAGDAEGRLGGGGGGSSAPA--- 53
Query: 203 AEGRRDDTVTES 238
A G D T+TE+
Sbjct: 54 AAGDADVTMTEA 65
>05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330
Length = 564
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 156 PPESPRQVLRPPWVFTQRVDAMTPLPKVRAQSAL 257
PP PR+ LRPP +RVD + PLP R ++L
Sbjct: 24 PP--PRRRLRPPRSPPRRVDDVDPLPNHRDDASL 55
>04_04_0146 + 23106325-23108154
Length = 609
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 120 RVRRPPYVKARGPPESPR 173
R RRPP V A+ PP SPR
Sbjct: 10 RPRRPPPVPAQAPPPSPR 27
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 131 SSIRESEGSTGVSAAGAAPPLGVHAEGRRDDT 226
S + ES+ + G+ + G AP G H EG +DD+
Sbjct: 493 SQLGESKANIGMMSLGGAPA-GFHNEGNQDDS 523
>01_05_0619 -
23737178-23737378,23737460-23737516,23737597-23737755,
23739477-23739621,23739725-23740136,23740693-23740855
Length = 378
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 590 RGHGASVAQQGGSAHGGATVGQSNHHSG 673
RGHG +GG GG T G++ SG
Sbjct: 126 RGHGPRQPYRGGGRRGGYTGGEAGDESG 153
>07_03_1016 - 23313210-23313827,23314649-23314717
Length = 228
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 654 RVITIAAXCG*XPSPATLPPTILAPSKSA 740
R + I C SPAT PP+++ PS A
Sbjct: 162 RAVFIGHDCSLSVSPATFPPSLVTPSTRA 190
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +2
Query: 35 PRSERGDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPP 190
P S GDPG R P+ LSS+ QGA S+ SAA APP
Sbjct: 301 PSSAPGDPG---RGPPVALSSSA-----QGAVQGTAGLMASSATSAAAMAPP 344
>04_01_0417 - 5523911-5523976,5525131-5525321,5525807-5526044
Length = 164
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 548 KRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVG 652
++A L G +RG G A++GG A GG +G
Sbjct: 105 EKAELVLAGGGRRARGGGLRCAEEGGGAEGGGRLG 139
>02_04_0035 +
19078267-19078479,19078588-19078674,19079792-19079863,
19080338-19080526,19080599-19080718,19081348-19081430,
19081518-19081773,19081878-19082199,19086355-19086548,
19087135-19087227,19089327-19089497,19089580-19089699,
19090303-19090373,19090608-19090675,19091097-19091191
Length = 717
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 554 ASLSAPGPPAVSRGHGASVAQQGGSAHGGATVG 652
AS+S A SRG G + +GGS GG VG
Sbjct: 476 ASMSDGKVTAASRGQGEASVGRGGSTAGGRGVG 508
>11_06_0717 - 26575009-26575152,26576461-26577978
Length = 553
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 137 WRTSHPDRDHLVWRCSMSAGTSGWFRQGHL 48
W SH + S AG SGWF Q ++
Sbjct: 387 WLASHQTQQATTMASSPPAGVSGWFHQQYM 416
>10_02_0073 + 4940672-4940699,4941172-4941250,4941685-4941775
Length = 65
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 545 LKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHHSGXM 679
LK S P +RG G + A+ GG + GA Q H G M
Sbjct: 19 LKVLIASLTNSPQAARGRGVA-ARLGGGSGSGAAAEQDASHGGGM 62
>09_02_0140 +
4879319-4879968,4881443-4881942,4884230-4884368,
4886005-4886156,4886267-4886532,4886902-4887028,
4887111-4887179,4887270-4887518,4887636-4888012
Length = 842
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 206 LREHPGGAQHLPRRLRWTPRFHVWRTSHPDRDHLVWRCS 90
L EH G H R L WT R + S ++L CS
Sbjct: 606 LEEHIAGRDHNKRNLTWTERLRIALESAQGLEYLHKGCS 644
>08_02_0410 - 16842306-16842950,16844994-16845182
Length = 277
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 41 SERGDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEG--STGVSAAGAAPPLGVHAEGR 214
+ RG+ GE + S++ RGD +G E +T +AA +A GV GR
Sbjct: 88 ARRGEEGELGLAAEAAASASARGDGGEGRRWRREGGEPGLATEAAAAASASVRGVGGGGR 147
Query: 215 R 217
R
Sbjct: 148 R 148
>06_03_1393 + 29846884-29847465
Length = 193
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 LFCNHLESSTYPRSERGDPGETSRMSPLTLSSA---KRGDPDQGATSSIRESEGSTGVSA 172
L H + PR+ GDP T+ +P SA G G + +R + V
Sbjct: 19 LLLRHRRRPSIPRASSGDPSPTAADAPTDAQSATPPSSGAKPTGVKNRLRARNQARRVQE 78
Query: 173 AGAAPPLGV 199
PLG+
Sbjct: 79 FTPPAPLGI 87
>05_03_0649 -
16566815-16567392,16567491-16567623,16568000-16568765,
16569242-16569260,16569320-16569367,16569401-16569506
Length = 549
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 35 PRSERGDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAA 184
P S GD GETSR S+ +RG + + G++ + AA AA
Sbjct: 168 PASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAA 217
>05_02_0145 + 7067521-7068993
Length = 490
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 449 QRRGYDYPRTGRIHKCDPADLPAPLTSPQQPIRGYLGLGCWL 324
+ G D+ G I + L P +PQ I G+ +GC+L
Sbjct: 342 EEEGMDFLPEGFIERTRGVGLLVPSWAPQTSILGHASIGCFL 383
>04_04_0690 - 27300048-27300929
Length = 293
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 527 SGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVG 652
+GA T + A AV+ G A +GG A G ATVG
Sbjct: 79 TGARTGAASSGAGADVGGAVAGGSAAGGVARGGEATGAATVG 120
>03_05_0931 -
28912700-28913056,28913245-28913319,28913424-28913497,
28913604-28913691,28913785-28913936,28914050-28914209,
28914303-28914458,28914566-28914784,28915390-28915650,
28917183-28917389,28917488-28917619
Length = 626
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 20 ESSTYPRSERGDPGET-SRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPP 190
E P +R PG + R + S KR D A S+R S GS+G S GAA P
Sbjct: 519 EKEAMPHLKR--PGSSFGRATEPCNMSRKRVD---AAPPSVRSSSGSSGSSGGGAADP 571
>03_02_0796 -
11251958-11251971,11252220-11252301,11252420-11252500,
11252892-11253004,11253081-11253177,11253525-11253839,
11253936-11253984,11254148-11254641,11254772-11254836,
11255074-11255239,11257016-11257654
Length = 704
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +2
Query: 74 MSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHAEGRRDDTVTESTRAVC 253
M+ +S +RG P + + SAAG AP V A RR + + + A
Sbjct: 1 MAAAAISHLRRGAPRHARALLYLSTRRFSSSSAAGVAPLAAVAASARRLLSTSVDSGASS 60
Query: 254 IGDHLKSHLMLP 289
G+ K L P
Sbjct: 61 TGESYKPPLFDP 72
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 527 SGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAH 634
S A+ Q+ AS++ P PP++ A++ +G +AH
Sbjct: 138 SYAQEQIIPASVAVPLPPSIDHNTAAAIMLKGMTAH 173
>02_05_0100 - 25821606-25822349
Length = 247
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 563 SAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHHS 670
+AP P+ R A+ A GG+AHG GQ HS
Sbjct: 205 TAPAGPSSGRQPSAA-AHPGGAAHGQPEKGQPGGHS 239
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +2
Query: 488 IVSVNSESTSEELSGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHH 667
I S ES + +G S SAP PA S H ++ A +A GAT+ + + H
Sbjct: 302 IGSSTPESGGAQQAGLSFGFSSTS-SAPPHPAASSAHMSATALLQKAAQMGATLSRPSSH 360
Query: 668 SGXMWMXA*PRHTAS 712
+ A H +S
Sbjct: 361 AHMAAAAAASTHNSS 375
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +3
Query: 93 AAPNEVIPIRVRRPPYVKARGPPESPRQVLRPPWV--FTQ-----RVDAMTPLPKVRAQ 248
A P E + + + PP + + PP P+Q PP ++Q V+ TPLP Q
Sbjct: 328 AQPTETMHQQYQAPPVPQPQAPPAPPQQYQTPPQFPQYSQPPQSGMVNPSTPLPPAAPQ 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,656,385
Number of Sequences: 37544
Number of extensions: 542508
Number of successful extensions: 2537
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2525
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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