Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c19r
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 72 4e-13
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 69 5e-12
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 57 2e-08
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 44 1e-04
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 31 0.65
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF078157-10|AAG24074.1| 377|Caenorhabditis elegans Hypothetical... 30 1.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 29 2.6
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 3.5
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 29 3.5
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 29 3.5
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 3.5
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 29 3.5
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 29 3.5
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein. 29 4.6
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 29 4.6
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 6.0
U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical pr... 28 8.0
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 28 8.0
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 28 8.0
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 28 8.0
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 28 8.0
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 28 8.0
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 28 8.0
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 28 8.0
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 28 8.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 72.1 bits (169), Expect = 4e-13
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 3/237 (1%)
Frame = -3
Query: 721 RIVGGSVAGLGXHPHXAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXXX 542
R++GGS + P ++ L R CG SL+ +TAAHC+
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAHCFAKDRRPTSYSVR 113
Query: 541 XXXXXXXXXXXFRINTNNVQMHGSYNMD--NLHNDVAMIIHGRVGYTNVIQPIFLPPSHL 368
R+ V +H YN+ + ++ M IH V + +PI LP
Sbjct: 114 VGGHRSGSGSPHRVTA--VSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLPA 171
Query: 367 LNNQFVGTWAWAAGYGRTSDASGSNTRKHQVALQVITNADCARTFGNGVIASTLCVNTQG 188
+ N+ W + +S ++ + H L + + G + S LC
Sbjct: 172 VENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSY 231
Query: 187 GR-STCRGDSGGPLAFTYGGRRTLIGITSFGAAQCQRGHPAGFARVTSFASWIRARL 20
G+ +C+GDSGGPL G L G+ S+G + G P + V S ++WI +
Sbjct: 232 GKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWINLEM 288
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 68.5 bits (160), Expect = 5e-12
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 8/241 (3%)
Frame = -3
Query: 724 ARIVGGSVAGLGXHPHXAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRT--RSAQGRX 551
AR+VGG G P AA+ T + CGAS+L T +TAAHC+ R +
Sbjct: 25 ARVVGGFETVPGAFPWTAALRNKAT--KAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 550 XXXXXXXXXXXXXXFRINTNNVQMHGSYNMDNLHNDVAM--IIHGRVGYTNVIQPIFLPP 377
+ + Y D +D+A+ I + + + QPI LP
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 376 SHLLNNQFVGTWAWAAGYGRTSDASGSNTRKHQVALQVITNADCART--FGNGVIASTLC 203
+ G +G+G S R + +I DC + + + S C
Sbjct: 142 KDFVYTP--GRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFC 197
Query: 202 VN-TQGGRSTCRGDSGGPLAF-TYGGRRTLIGITSFGAAQCQRGHPAGFARVTSFASWIR 29
+GG +C+GDSGGP A G L G+ S+G Q+ P + V + SWI
Sbjct: 198 AGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWIS 257
Query: 28 A 26
A
Sbjct: 258 A 258
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 56.8 bits (131), Expect = 2e-08
Identities = 68/251 (27%), Positives = 104/251 (41%), Gaps = 20/251 (7%)
Frame = -3
Query: 721 RIVGGSVAGLGXHPHXAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXXX 542
RI+GG+ G + A +V +G+ +CGA+++ VTAAHC + Q +
Sbjct: 37 RIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC----ALQLQTRSF 91
Query: 541 XXXXXXXXXXXFRINTNNVQMHGSYNMDNLHNDVAMIIHGRVGYTNVIQPIFL--PPSHL 368
+ +H YN ND+A++ I+P+ L S L
Sbjct: 92 VYVREPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLSKLGIKPVCLVHDDSKL 151
Query: 367 LNNQFVGTWAWAAGYGRT--SDASGS----NTRKHQ-VALQVITNADCARTFGNGVIAST 209
L G GYG T D+SG N++ Q ++ +I++ DC +T+ + S
Sbjct: 152 LKQYKNGV---VIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSV 208
Query: 208 LCVNTQ--GG---RSTCRGDSGGPLAF-TYGGRRTLIGITSFGAAQC-----QRGHPAGF 62
Q G T GDSGGPL G IGITS+GA Q P +
Sbjct: 209 KITGYQICAGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVY 268
Query: 61 ARVTSFASWIR 29
R++ + WI+
Sbjct: 269 TRISKYVPWIQ 279
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Frame = -3
Query: 451 HNDVAMIIHGRVGYTNVIQPIFLPPSHLLNNQFVGTWAWAAGYGRTSDASGSNTRKHQVA 272
H+ + + R+ ++ ++PI LP ++ + + W GR + SG H++
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPRPNMYYTKSLAVPGW----GRIFNESGPLI--HEIP 196
Query: 271 LQVITNADCARTFGNG--------VIASTLCVNTQGGRSTCRGDSGGPLAFTYG--GRRT 122
+++ + DC R + + + A+++ V+ TC GDSGG L + GR
Sbjct: 197 MRI--DRDCKRPWSDRLPADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAF 254
Query: 121 LIGITSFGAAQCQRGHPAGFARVTSFASWI 32
LI ITSFG C A F RV + + I
Sbjct: 255 LIAITSFGTRGCPSNMLARFTRVDMYLNLI 284
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -3
Query: 388 FLPPSHLLNNQFVGTWAWAAGYGRTSDASGSNTRKHQVALQVITNADCARTFGNGVIAST 209
FLP ++ + V ++ W + G+ D + + + L T A C +G + +
Sbjct: 200 FLPEVNIQSGANVTSFGWGSDPGKGFD-NAAFPMIQVLTLATETLATCEENWGTSIPFDS 258
Query: 208 LCVNTQGGRSTCRGDSGGPLAF--TYGGRRTLIGITSFGA 95
C + ++ C GDSGG L F + R +I I S+G+
Sbjct: 259 FCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGS 298
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 244 ARTFGNGVIASTLCVN-TQGGRSTCRGDSGGP-LAFTYGGRRTLIGITSFG 98
A TF +GVIA C N TQ G+STC P + T G T +G G
Sbjct: 1140 ATTFNSGVIARVTCSNGTQIGQSTCLVGQWTPAITATCSGSSTAVGSQCIG 1190
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2
Query: 440 GYDYPRTGRIHKCDPADLPAPLTSP 366
GY+Y ++ R CDPADL +P++SP
Sbjct: 430 GYNYAKS-RKRPCDPADLHSPISSP 453
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -3
Query: 673 AAMVITLTDGRTSMCGASLLSHTRSVTAAHC 581
A+++ DG T++CG L++ + +T+AHC
Sbjct: 32 ASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -3
Query: 337 WAAGYGRTSDASGSNTRKHQVAL-QVITNADCARTFGNGVIASTLCVNTQGGRSTCRGDS 161
+ AG+G+T + T K+ ++ Q++ N R G + G C GDS
Sbjct: 162 YVAGWGKTEN----KTAKYSDSVRQMMVNLSVRRI---GKRKYLIAKAVTGSSRACMGDS 214
Query: 160 GGPLAFTYGGRRTLIG 113
G P+ G+R L+G
Sbjct: 215 GSPVYCFVNGKRILVG 230
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 20 ESSTYPRSERGDPGETSRMSPLTLSSAKR-GDPDQGATSSIRESEGSTGVSAAGAAPP 190
+SS + S G P ++M PL+++ + R G P G S I S GS +A G APP
Sbjct: 767 QSSPHQHSAMGSPVPFAKM-PLSVNVSNRHGSPFNGKVSPI-ASIGSVLAAAGGPAPP 822
>AF078157-10|AAG24074.1| 377|Caenorhabditis elegans Hypothetical
protein F25E5.3 protein.
Length = 377
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 193 QGGRSTCRGDSGGPLAFTYGGRRTLIGITSFGAAQC 86
+G R C GD G T GR ++GI + G C
Sbjct: 228 KGNRRLCAGDFGAGAVATIDGRNVVLGIYAEGNTDC 263
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 527 SGAETQLKRASLSAPGPPAVSRGHGASVA-QQGGSAHGGATVGQSNHHSGXMWMXA*PRH 703
+ A L S P PPA S H S GGS+ GG + G S+ G A
Sbjct: 144 ASAPVSLPAPSYGGPPPPAPSFSHAPSGGYSSGGSSGGGYSSGGSSGGGGYAGGAAAAGA 203
Query: 704 TASYDPGAVEVS 739
TA+ A E S
Sbjct: 204 TAAQVDEASETS 215
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 172 RGDSGGPLAFTYGGRRTLIGITSFGAAQCQRG 77
+GDSGG G++T+IG+ S + Q +RG
Sbjct: 397 KGDSGGGAIADVKGKKTIIGVLSQTSCQKRRG 428
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 23 SSTYPRSERGDPGETSRMSP-----LTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAP 187
SS+ R+ R P + SP +T S AKR ++ R++ S+ S A
Sbjct: 492 SSSTSRNRRPSPSVAKKTSPPSIYAITSSPAKRASSTASGPTARRQNSTSSVTSTTSAKT 551
Query: 188 PLGV 199
P+GV
Sbjct: 552 PVGV 555
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 20 ESSTYPRSERGDPGETSRMSPLTLSSAKRGD 112
E YPRSE+ + SR S +++S+ GD
Sbjct: 408 EEEDYPRSEKSGNSQKSRRSRMSISTRSSGD 438
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 20 ESSTYPRSERGDPGETSRMSPLTLSSAKRGD 112
E YPRSE+ + SR S +++S+ GD
Sbjct: 408 EEEDYPRSEKSGNSQKSRRSRMSISTRSSGD 438
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 20 ESSTYPRSERGDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAA 184
+SST + P T+ T+S+ QG TSS +S STGVS ++
Sbjct: 856 QSSTVASTTTVSPYTTTECICTTVSNTFGTSTTQGLTSSSAQSTASTGVSTVASS 910
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 20 ESSTYPRSERGDPGETSRMSPLTLSSAKRGD 112
E YPRSE+ + SR S +++S+ GD
Sbjct: 408 EEEDYPRSEKSGNSQKSRRSRMSISTRSSGD 438
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 20 ESSTYPRSERGDPGETSRMSPLTLSSAKRGD 112
E YPRSE+ + SR S +++S+ GD
Sbjct: 408 EEEDYPRSEKSGNSQKSRRSRMSISTRSSGD 438
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 485 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 342
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 823
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 485 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 342
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 823
>Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical
protein K12F2.2b protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 485 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 342
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 289 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 339
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHAEG 211
G PGE S M+ + G +GA++ G SA GAAPP G + G
Sbjct: 167 GAPGEASTMTAV-------GGAPRGASTMTAVGAPGGGASALGAAPPAGSMSGG 213
>AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 485 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 342
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 289 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 339
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 485 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 342
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 823
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 124 CDVLHT*KRGVHRSLRGRCCAPPGCSRRGST 216
CD+ + K+G R+ +G+C P C GST
Sbjct: 195 CDIGCSCKKGFLRNRQGQCVNPTECPATGST 225
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 124 CDVLHT*KRGVHRSLRGRCCAPPGCSRRGST 216
CD+ + K+G R+ +G+C P C GST
Sbjct: 195 CDIGCSCKKGFLRNRQGQCVNPTECPATGST 225
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = -2
Query: 635 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 459
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 458 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 354
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = -2
Query: 635 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 459
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 458 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 354
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = -2
Query: 635 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 459
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 458 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 354
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical
protein T21E12.3 protein.
Length = 162
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = -3
Query: 325 YGRTSDASGSNTRKHQVALQVITNADCARTFGNGVIASTLCVNTQGGRSTCRGDSGGPLA 146
+G D S N + + + C T G ++ N + C GDSGG +
Sbjct: 27 FGFGIDPSAGNQSAGPLRSETVKAEKCFTTTGKAFCTKSISKN----QLACTGDSGGGVV 82
Query: 145 FTYGGRRTLIGI 110
R T++G+
Sbjct: 83 QLINDRVTVVGV 94
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 659 YSDRRSHLHVRSLPAEPHSLR---DRGSLLEDQERSRTHASIGFRHH 528
++ R H R LPA H+LR GSL+ +E TH G+ H+
Sbjct: 30 FASSRPHYERRQLPAMQHTLRHNHSMGSLMGPRELPFTH---GYHHN 73
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHA 205
G PG +S ++ +++ P Q S++ EG++G+ + P LG+ A
Sbjct: 149 GVPGPSSGIAGMSVQPPTSSTPSQ--QQSVQSLEGTSGLIGSAMKPMLGIDA 198
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHA 205
G PG +S ++ +++ P Q S++ EG++G+ + P LG+ A
Sbjct: 174 GVPGPSSGIAGMSVQPPTSSTPSQ--QQSVQSLEGTSGLIGSAMKPMLGIDA 223
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHA 205
G PG +S ++ +++ P Q S++ EG++G+ + P LG+ A
Sbjct: 157 GVPGPSSGIAGMSVQPPTSSTPSQ--QQSVQSLEGTSGLIGSAMKPMLGIDA 206
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHA 205
G PG +S ++ +++ P Q S++ EG++G+ + P LG+ A
Sbjct: 170 GVPGPSSGIAGMSVQPPTSSTPSQ--QQSVQSLEGTSGLIGSAMKPMLGIDA 219
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHA 205
G PG +S ++ +++ P Q S++ EG++G+ + P LG+ A
Sbjct: 168 GVPGPSSGIAGMSVQPPTSSTPSQ--QQSVQSLEGTSGLIGSAMKPMLGIDA 217
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHA 205
G PG +S ++ +++ P Q S++ EG++G+ + P LG+ A
Sbjct: 168 GVPGPSSGIAGMSVQPPTSSTPSQ--QQSVQSLEGTSGLIGSAMKPMLGIDA 217
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 50 GDPGETSRMSPLTLSSAKRGDPDQGATSSIRESEGSTGVSAAGAAPPLGVHA 205
G PG +S ++ +++ P Q S++ EG++G+ + P LG+ A
Sbjct: 149 GVPGPSSGIAGMSVQPPTSSTPSQ--QQSVQSLEGTSGLIGSAMKPMLGIDA 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,102,562
Number of Sequences: 27780
Number of extensions: 377129
Number of successful extensions: 1402
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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