Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c19r
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 80 2e-17
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 2.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 7.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.2
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 9.2
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 9.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.2
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 79.8 bits (188), Expect = 2e-17
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 10/241 (4%)
Frame = -3
Query: 724 ARIVGGSVAGLGXHPHXAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXX 545
+RIVGG+ G+ P A + T G +CGA+++S +TAAHC +
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHCIIDENTTKLAIV 216
Query: 544 XXXXXXXXXXXXFRI---NTNNVQMHGSYNM----DNLHNDVAMIIHGR-VGYTNVIQPI 389
+ N V +H Y++ D ND+A++ + + + + + P
Sbjct: 217 VGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPA 276
Query: 388 FLPPSHLLNNQFVGTWAWAAGYGRTSDASGSNTRKHQVALQVITNADCARTFGNGVIAST 209
LP H L++ F G+ G+G TS + + L ++T +C + +GN ++ +
Sbjct: 277 CLPFQHFLDS-FAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYYGN-IMVNA 334
Query: 208 LCVNTQGGRSTCRGDSGGPLAFTYGGRRTL--IGITSFGAAQCQRGHPAGFARVTSFASW 35
+C +G + C+ DSGGP+ + + L IGI S+G A+C + +P G +V S+ W
Sbjct: 335 MCAYAKG-KDACQMDSGGPVLWQNPRTKRLVNIGIISWG-AECGK-YPNGNTKVGSYIDW 391
Query: 34 I 32
I
Sbjct: 392 I 392
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 23.4 bits (48), Expect = 2.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 122 GATSSIRESEGSTGVSAAGAAPPLGVHA 205
GATSS+ GST S+A A V A
Sbjct: 113 GATSSMVPGFGSTAASSAALAAAAAVDA 140
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 398 PADLPAPLTSPQQPIRG 348
P P+P SPQ P RG
Sbjct: 21 PGPQPSPHQSPQAPQRG 37
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 87 VSGDIRLVSPGSPRSLL 37
++ I+LVSPG +SLL
Sbjct: 1021 LASQIKLVSPGQIKSLL 1037
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 569 PGPPAVSRGHGASVAQQ 619
PGPP V HG +Q
Sbjct: 332 PGPPGVPGDHGDHAPKQ 348
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 569 PGPPAVSRGHGASVAQQ 619
PGPP V HG +Q
Sbjct: 332 PGPPGVPGDHGDHAPKQ 348
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +2
Query: 485 NIVSVNSESTSEELSGAETQLKRASLSA 568
N+ NSE T ++ +++ +KR +S+
Sbjct: 301 NVEETNSEETHQKDGSSDSVIKRTVVSS 328
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +2
Query: 485 NIVSVNSESTSEELSGAETQLKRASLSA 568
N+ NSE T ++ +++ +KR +S+
Sbjct: 216 NVEETNSEETHQKDGSSDSVIKRTVVSS 243
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +2
Query: 485 NIVSVNSESTSEELSGAETQLKRASLSA 568
N+ NSE T ++ +++ +KR +S+
Sbjct: 535 NVEETNSEETHQKDGSSDSVIKRTVVSS 562
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 569 PGPPAVSRGHGASVAQQ 619
PGPP V HG +Q
Sbjct: 271 PGPPGVPGDHGDHAPKQ 287
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,226
Number of Sequences: 438
Number of extensions: 4958
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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