Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c19f
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.001
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 39 0.002
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 38 0.004
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 37 0.010
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.023
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.040
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 35 0.040
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.040
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.053
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.070
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.070
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.070
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.070
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.093
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.12
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.22
SB_46548| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.28
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.66
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 31 0.66
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.66
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.87
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 30 1.1
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 30 1.5
SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96) 29 2.6
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.6
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 29 2.6
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.6
SB_28705| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 29 3.5
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 29 3.5
SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 28 6.1
SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRS--AQGRX 369
+R++GG A G P I L +CG SL+S T VTAAHC S AQ +
Sbjct: 475 SRVIGGKDAIPGAWP----WQIALKSRGNFICGGSLVSSTWVVTAAHCVARSSNPAQYQI 530
Query: 370 XXXXXXXXXXXXXXXRINTNNVQMHGSYNMDNLHNDVAMI-IHGRVGYTNVIQPIFLPP 543
+N V H YN L ND+A+I + ++ + P+ LPP
Sbjct: 531 IVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPVCLPP 589
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 39.9 bits (89), Expect = 0.001
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCW----RTRSAQGR 366
RIVGG A G P LAA+ + + CG +L++ VTAAHC+ + +
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHCFYYDGKIVPSDIL 778
Query: 367 XXXXXXXXXXXXXXXXRINTNNVQMHGSYNMDNLHNDVAMI-IHGRVGYTNVIQPIFLP 540
+ +N+ +H N + L DVA+I + G V T ++ + LP
Sbjct: 779 VRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALIQLKGGVKLTAYVRTVCLP 837
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 7/121 (5%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXX 375
+RIVGG+ A G P A ++ G CG +L+ VTA+HC +
Sbjct: 209 SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTH 268
Query: 376 XXX----XXXXXXXXXXRINTNNVQMHGSYNM--DNLHNDVAMIIHGRVGY-TNVIQPIF 534
RI + +H YN+ +NDVA+I + T +QP+
Sbjct: 269 IISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVC 328
Query: 535 L 537
L
Sbjct: 329 L 329
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 178 GADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRT-RS 354
G +RIVGG+ A G P A + T G CG SL+ +TAAHC + R
Sbjct: 383 GVSSSTSRIVGGAAANPGDWPWQAQL--RTTTG-FPYCGGSLIHSNWVLTAAHCISSKRP 439
Query: 355 AQGRXXXXXXXXXXXXXXXXR-INTNNVQMHGSYNMDNLHNDVAMI 489
A+ + I + + H +YN ++ND+A++
Sbjct: 440 AEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALL 485
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 38.7 bits (86), Expect = 0.003
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Frame = +1
Query: 160 LKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
L SAE G G+RIVGG+ A + P AM++ +G CG SL+ +TAAHC
Sbjct: 16 LCSAECGVKPGGSRIVGGTEAPINGWP-WQAMLLRSPNG-DQFCGGSLIDPGWVLTAAHC 73
Query: 340 WRTRSAQGRXXXXXXXXXXXXXXXXRINTNNVQMHGSYNMD-NLHNDVAMI 489
I + H +Y+ + ND+A++
Sbjct: 74 LVGEQPDSALLGAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALL 124
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 38.3 bits (85), Expect = 0.004
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Frame = +1
Query: 166 SAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWR 345
SA G G RI+ G A + P ++L + CGASLLS ++TAAHC +
Sbjct: 74 SASCGRRPGGTRIINGEEAVPNSWP----WQLSLRVYGSHNCGASLLSPGWALTAAHCVQ 129
Query: 346 TRSAQGRXXXXXXXXXXXXXXXXRI-NTNNVQMHGSYNMDNLHNDVAMI-IHGRVGYTNV 519
S ++ + V H ++M +L NDV ++ + V ++
Sbjct: 130 RSSNPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLLRLSAPVQLSDK 189
Query: 520 IQPIFLP 540
I I LP
Sbjct: 190 IGTICLP 196
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +1
Query: 202 IVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWR-TRSAQGRXXXX 378
I+GG+ A G P +M + + +CG +++S +TAAHC + R++ +
Sbjct: 546 IMGGANAEHGEWPWQVSMKLN-SSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTMG 604
Query: 379 XXXXXXXXXXXXRINTNNVQMHGSYNMDNLHNDVAMIIHGR-VGYTNVIQPIFLPPS 546
I + H +Y+ + + D A++ R + +T +QP+ LP S
Sbjct: 605 EWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDS 661
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 37.5 bits (83), Expect = 0.008
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAM--VITLTDGRTSMCGASLLSHTRSVTAAHCWR-TRSAQG-R 366
RIVGG+ A G P +M V +CG S+++ VTAAHC+ ++ A+
Sbjct: 103 RIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKDYT 162
Query: 367 XXXXXXXXXXXXXXXXRINTNNVQMHGSYNMDNLHN-DVAMI-IHGRVGYTNVIQPIFLP 540
R + + +H Y N H+ DVA+I + + Y + ++P+ LP
Sbjct: 163 IAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCLP 222
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 37.5 bits (83), Expect = 0.008
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 193 GARIVGGSVAGLGTHPHLAAMVITLTDGRTSM--CGASLLSHTRSVTAAHCWRTRSAQGR 366
GARIV G A + P +A+ L GR++ CGA+L+ ++TAAHC R +
Sbjct: 323 GARIVNGQEAVSHSWPWIAS----LRKGRSNYHTCGATLIRPGWAITAAHC-VMRPDKYT 377
Query: 367 XXXXXXXXXXXXXXXXRINTNNVQMHGSYNMDNLHNDVAMI 489
I V H ++M N +D+A++
Sbjct: 378 VIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALL 418
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 193 GARIVGGSVAGLGTHPHLAAMVITLTD-GRTSMCGASLLSHTRSVTAAHC 339
GAR++ G A PH I+L GR CG +L+S VTA+HC
Sbjct: 27 GARVINGQNA----QPHSWPWQISLRPYGRYHSCGGTLISDRWVVTASHC 72
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHP-HLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCW 342
ARIVGG+ AG GT P + + + +CG +L++ +TAAHC+
Sbjct: 125 ARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCF 174
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 36.7 bits (81), Expect = 0.013
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +1
Query: 193 GARIVGGSVAGLGTHPHLAAMVITLTDGRTSM--CGASLLSHTRSVTAAHC-WRTRSAQG 363
GARI+ G A PH I+L GR+ CG SL+S VTAAHC R ++ G
Sbjct: 103 GARIINGQNA----QPHSWPWQISLR-GRSGFHTCGGSLISDRWVVTAAHCIHRNKNPGG 157
Query: 364 RXXXXXXXXXXXXXXXXR-INTNNVQMHGSYNMDNLHNDVAMI 489
+ + + + H YN + ND+A++
Sbjct: 158 YTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALL 200
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
RIVGG A + P A + L D T +CG SL++ VTAAHC
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHC 476
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 35.1 bits (77), Expect = 0.040
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = +1
Query: 181 ADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQ 360
+D +R+V G A LG P A + +T +CG SL++ +TA HC T +
Sbjct: 55 SDSASSRVVSGDDATLGEWPWQAWLHVT---PHGFVCGGSLIAPQWVLTAGHCILTEDPE 111
Query: 361 GRXXXXXXXXXXXXXXXXRI-NTNNVQMHGSYNMD-NLHNDVAMIIHGRVGY-TNVIQPI 531
+I + + H Y+ D NDVA++ R + T+ + +
Sbjct: 112 KYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQLSRPAFVTSFVNTV 171
Query: 532 FLP 540
LP
Sbjct: 172 CLP 174
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 35.1 bits (77), Expect = 0.040
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 190 DGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
DG RIVGG A PH +++ + +CG SLLS +TAAHC
Sbjct: 27 DGVRIVGGDEAV----PHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC 72
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGR 366
RI+GG + + HP + AM++ CG SL+ VTAAHC+ + + R
Sbjct: 40 RIMGGQRSTIEQHPWMVAMMLDSAQA----CGGSLVPEDWIVTAAHCFDSNRLRWR 91
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 34.7 bits (76), Expect = 0.053
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = +1
Query: 217 VAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXXXXXXXXX 396
V G PH ++ + +CGASLL+ ++TAAHC T S
Sbjct: 242 VNGEDAVPHSWPWQLSFRYKGSHICGASLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQ 300
Query: 397 XXXXXXRINTNNVQMHGSYNMDNLHNDVAMI 489
+ ++ H ++M ++ NDVA++
Sbjct: 301 RENDGQVFGISKIRKHKGFSMVHVRNDVALL 331
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 34.7 bits (76), Expect = 0.053
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 193 GARIVGGSVAGLGTHPHLAAMVITLTDGRT-SMCGASLLSHTRSVTAAHC 339
GARI+ G A PH I+L GR +CG +L+S VTA+HC
Sbjct: 843 GARIINGQNA----QPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 193 GARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
GAR++GG A PH I+L MCG +L+S +TA HC
Sbjct: 433 GARVIGGEDAA----PHSWPWQISLRVRGKHMCGGTLISPDWVLTAGHC 477
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 34.3 bits (75), Expect = 0.070
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Frame = +1
Query: 193 GARIVGGS--VAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCW-RTRSAQG 363
G R G S V G H I+L +CG SL++ VTAAHC R + G
Sbjct: 23 GKRPYGTSRVVNGDNAQQHSWPWQISLRVNGRHICGGSLIAKDWVVTAAHCVDRNPTPSG 82
Query: 364 RXXXXXXXXXXXXX-XXXRINTNNVQMHGSYNMDNLHNDVAMI-IHGRVGYTNVIQPIFL 537
+ H ++M +L ND+A++ +H V ++ + + L
Sbjct: 83 YTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCL 142
Query: 538 PPS 546
P S
Sbjct: 143 PSS 145
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 34.3 bits (75), Expect = 0.070
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 259 ITLTDGRTSMCGASLLSHTRSVTAAHC--WRTRSAQGRXXXXXXXXXXXXXXXXRINTNN 432
I L + +CG SL+S T VTAAHC + + + +
Sbjct: 83 IALERSGSFICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKR 142
Query: 433 VQMHGSYNMDNLHNDVAMI 489
+ H +YN L ND+A+I
Sbjct: 143 IITHPTYNSPQLSNDIALI 161
Score = 29.9 bits (64), Expect = 1.5
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXXX 378
RIVGG+ A G P A + T G CG SL+ +TA HC +R
Sbjct: 663 RIVGGTAAKQGDWPWQAQL--RSTSG-FPFCGGSLIHPQWVLTATHCVSSRRPTDLNIRL 719
Query: 379 XXXXXXXXXXXXR-INTNNVQMHGSYNMD-NLHNDVAMI 489
+ I + MH Y L +D+A+I
Sbjct: 720 GAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHDIALI 758
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.3 bits (75), Expect = 0.070
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 109 PIETNYHEVIGIPMAMELKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSM 288
P++T P + G+ G RIVGG+ A + P A + + G +
Sbjct: 229 PVKTTAAPTPSPPQTPPPPTGSCGSKPSGTRIVGGTEAPVNGWPWQAML---RSAGGSQF 285
Query: 289 CGASLLSHTRSVTAAHC 339
CG SL+ +TAAHC
Sbjct: 286 CGGSLIHPEWVLTAAHC 302
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 34.3 bits (75), Expect = 0.070
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCW 342
RIVGG + G P AA+ + T R CG S++ VTAAHC+
Sbjct: 26 RIVGGIESANGAWPWQAALFLNGTHHR---CGGSVIKSQWVVTAAHCF 70
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 33.9 bits (74), Expect = 0.093
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCW 342
RIVGG A G P A+ L +G T CG SL++ VTA HC+
Sbjct: 53 RIVGGVEAAPGAWPWQVAL---LMNG-TQFCGGSLVNENWVVTARHCF 96
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 33.9 bits (74), Expect = 0.093
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
+RI+GG+ A P A ++I + CG +L+ VTAAHC
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHC 330
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 178 GADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
G+ G RIVGG+ A + P A + + G + CG SL+ +TAAHC
Sbjct: 212 GSKPSGTRIVGGTEAPVNGWPWQAML---RSAGGSQFCGGSLIHPEWVLTAAHC 262
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
+RIVGGS A G P ++ GR CG +L++ +TAAHC
Sbjct: 629 SRIVGGSTAPPGAWPWQVMLIYN--SGR-QFCGGTLVTPEWVITAAHC 673
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
+R++GG A P+ ++++ G+ CG +L+S +TAAHC
Sbjct: 475 SRVIGGEAA----RPYSWPWQVSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_46548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 106 VPIETNYHEVIGIPMAMELKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTS 285
+PI + H+ G +A L +AE GAD + S++G+ + P + A+V L +G
Sbjct: 704 LPIHVHTHDTAGAGVASMLAAAEAGADV--VDVAVDSMSGMTSQPSMGAVVAAL-EGTEL 760
Query: 286 MCGASLLS 309
G +L S
Sbjct: 761 DTGIALQS 768
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRT 348
+RIVGG A + P +++ + T CG SL+ +T++HC+ T
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWT 294
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTR 351
RIVGG A + P +V+ +G CG SL+ VT+ HC+ R
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCFDQR 296
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.1 bits (67), Expect = 0.66
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSA----QGR 366
RIVGG G +P + + G CG SL+S +TAAHC R+ + R
Sbjct: 107 RIVGGHDTVKGAYP----WHVLIRKGGHVACGGSLISEKWVLTAAHCVTHRNGNILPRSR 162
Query: 367 XXXXXXXXXXXXXXXXRI---NTNNVQMHGSYNMDNLHNDVAMI-IHGRVGYTNVIQPIF 534
++ N + ++ H ++ D+A+I + G + ++PI
Sbjct: 163 FQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPIC 222
Query: 535 LP 540
LP
Sbjct: 223 LP 224
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQG 363
+ I+GG+ A +G P ++ +T +CG +LL+ +TAA C+R G
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTHYG---PVCGGTLLTSEWVLTAARCFRDNKRAG 308
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 31.1 bits (67), Expect = 0.66
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = -2
Query: 381 TQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHHSGKMWMSA*PRHTASYD 202
T + + + P P G+ A A++GG AH G +G SG + S D
Sbjct: 1197 TSTRDSKVRNPFPTRGKGGYSARGARRGGVAHRGKFIGSGRLQSGGTYRPQPKYEDVSED 1256
Query: 201 PGA-VEVSALLSALELHRHRDPDHL 130
G+ + S+ +A R D L
Sbjct: 1257 EGSQSDSSSYTTATSASEERSGDEL 1281
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQ 360
R+VGG A G P A++ R CG +L+ VT AHC+ +++
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFK----RQQYCGGALVHERWVVTGAHCFNPYTSE 77
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 30.7 bits (66), Expect = 0.87
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 181 ADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
A+ R++ GS A LG P A + + T +CG SL++ +TAAHC
Sbjct: 25 AEVPATRVISGSEALLGEWPWQAWLHLQHTG---FICGGSLVAPGWVLTAAHC 74
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWR 345
RIVGG V+ G P A++ L D + +C SL+ +TA HC++
Sbjct: 53 RIVGGVVSSEGLWPWQVALL--LNDRQ--VCAGSLIEARWIITAGHCFK 97
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/94 (24%), Positives = 40/94 (42%)
Frame = -2
Query: 432 IVSVNSESTSEELSGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNHH 253
++ NS+ + L E +L + L G P S+ ++G HG T H+
Sbjct: 441 VIYFNSQEVVKNLLSKEHKLGDSILKLTGVPQ-------SMDEEGPKHHGQTT--NPKHN 491
Query: 252 SGKMWMSA*PRHTASYDPGAVEVSALLSALELHR 151
G ++ + Y PG +EV+ L+ +E R
Sbjct: 492 GGNKETTSSSQTPTDYKPGIIEVAVDLNIMEFVR 525
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSA 357
RIVGG+ A G P A + T CG SL++ +TA HC + A
Sbjct: 10 RIVGGTAAKHGDWPWQAQL---RTTSGFPYCGGSLIAPQWILTATHCVERKQA 59
>SB_51163| Best HMM Match : Adeno_PIX (HMM E-Value=0.96)
Length = 772
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -2
Query: 417 SESTSEELSGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGA-TVGQSNHHSGKM 241
S S S LS + T +SLS P++S+G +S++ S GG+ T G + +G
Sbjct: 249 SSSLSNGLSSSMTNGFSSSLSNGMSPSLSQGLSSSLSNGLSSYTGGSDTNGLGSLAAGYS 308
Query: 240 WMSA*PRHTASYDPGAVEVSALLSALE 160
+ + PG + SAL + L+
Sbjct: 309 QGTGSDLNGGGLGPGKISASALSAGLD 335
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 196 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
+RIVGG+ A G P A ++ +G CG +L+ VTA+HC
Sbjct: 247 SRIVGGTTAQRGAWPWQA--MLRYYNGN-HFCGGTLVHPRWVVTASHC 291
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 193 GARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
G RI+ GS A + P + I +G CG +L+S VTAAHC
Sbjct: 349 GTRIISGSDAQPNSWPWMVQ--INYNNGHH--CGGTLVSPQWVVTAAHC 393
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 103 FVPIETNYHEVIGIPMAMELKSAEEGADFDGARIV 207
FVPI T H++ G+P+ + +G DFD ++
Sbjct: 617 FVPIRTRQHDIAGLPLLNLIGKGLQG-DFDSNEVL 650
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 286 MCGASLLSHTRSVTAAHC 339
+CG SLLS T +TAAHC
Sbjct: 339 ICGGSLLSSTWVLTAAHC 356
>SB_28705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 561 VVEEM*GGQEDRLDHICVSDPSVDN 487
+VEE +D LD++CV DPS N
Sbjct: 43 MVEEALNDPDDALDNVCVDDPSKRN 67
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
RIVGG+ A G P AM+ + G+ CG +L+ +TAAHC
Sbjct: 139 RIVGGTKAPPGAWPW-QAMLRSNYGGQ--FCGGTLVHPQWVITAAHC 182
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITL--TDGRTSMCGASLLSHTRSVTAAHC 339
RI GGS + G +P A+ ++ T CG +L++ +TAAHC
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSA 357
RIVGG+ A + P A + T CG SL+ +TA HC +SA
Sbjct: 53 RIVGGTAAKQNSWPWQAQL---RTTSGFPYCGGSLIHPQWILTATHCVSGKSA 102
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTR 351
+IVGG V G P + T G +CG S+++ VTAAHC T+
Sbjct: 1782 QIVGGKVTEHGAWPW-QVQIGYKTMGH--ICGGSIVNSQWIVTAAHCVTTK 1829
>SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 166 SAEEGADFDGARIVGGSVAGLGT 234
+A++GA+ DG GG+V G+GT
Sbjct: 168 TADDGANTDGGGAGGGAVTGVGT 190
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +1
Query: 166 SAEEGADFDGARIVGGSVAGLGTHPH--------LAAMVITLTDGRTSMCGASL 303
S ++GA+ DG GG+V G+GT A +T+ DG T +CG S+
Sbjct: 300 SPDDGANTDGGGAGGGAVTGVGTPDDEANTDGGGAATGGVTVDDGAT-ICGCSV 352
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 27.9 bits (59), Expect = 6.1
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC--WRTRSAQGRXX 372
RIVGG+ A P A + + CG +L+ VTA+HC +T S+
Sbjct: 23 RIVGGTAAPKNAWPWQAQL---RSASGFPFCGGTLVHPRFVVTASHCIDKKTPSSLRIRL 79
Query: 373 XXXXXXXXXXXXXXRINTNNVQMHGSY-NMDNLHNDVAMI 489
+ H Y N NL ND+A+I
Sbjct: 80 GAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVI 119
>SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 249 RYGDYSDRRSHLHVRSLPAEPHSLRDRGSLLEDQER 356
R+GD S+ H+ + ++ P+ + G +L+DQ R
Sbjct: 578 RFGDPSNMAKHIRLHAVGDTPYKCQYCGKVLKDQNR 613
>SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 288 HGGATVGQSNHHSGKMWMSA*PRH 217
+GGA V S+ HS K+++S P H
Sbjct: 376 YGGAVVASSSDHSIKLYLSGHPLH 399
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,867,436
Number of Sequences: 59808
Number of extensions: 282880
Number of successful extensions: 1705
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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