Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c19f
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 39 0.002
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 37 0.012
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 35 0.035
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 33 0.14
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 33 0.14
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical pr... 28 5.4
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein. 28 5.4
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 28 5.4
Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical pr... 27 7.1
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 27 7.1
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 27 7.1
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 27 9.4
U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical pr... 27 9.4
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 166 SAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCW 342
+A + A AR+VGG G P AA+ T + CGAS+L T +TAAHC+
Sbjct: 15 NARDAAKSRIARVVGGFETVPGAFPWTAALRNKAT--KAHHCGASILDKTHLITAAHCF 71
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 36.7 bits (81), Expect = 0.012
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
Frame = +1
Query: 157 ELKSAEEGADFDGA--RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTA 330
+ +SA+E AD+ R++GGS + + P ++ L R CG SL+ +TA
Sbjct: 41 QTRSAQEPADYVTLDHRLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTA 97
Query: 331 AHCWRTRSAQGRXXXXXXXXXXXXXXXXRINTNNVQMHGSYNM--DNLHNDVAMIIHGRV 504
AHC+ R+ V +H YN+ + ++ M IH V
Sbjct: 98 AHCFAKDRRPTSYSVRVGGHRSGSGSPHRVTA--VSIHPWYNIGFPSSYDFAIMRIHPPV 155
Query: 505 GYTNVIQPIFLPPSHLLNNQ 564
+ +PI LP + N+
Sbjct: 156 NTSTTARPICLPSLPAVENR 175
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 35.1 bits (77), Expect = 0.035
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +1
Query: 199 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXXX 378
RI+GG+ G + +A +V +G+ +CGA+++ VTAAHC + Q +
Sbjct: 37 RIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC----ALQLQTRSF 91
Query: 379 XXXXXXXXXXXXRINTNNVQMHGSYNMDNLHNDVAMI 489
+ +H YN ND+A++
Sbjct: 92 VYVREPKNNRERSFSVKEAYIHSGYNNQTADNDIALL 128
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 202 IVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 339
I+ G A LA+++ DG T++CG L++ + +T+AHC
Sbjct: 17 IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical
protein D2023.2 protein.
Length = 1175
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 106 VPIETNYHEVIGIPMAMELKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTS 285
+PI + H+ G +A L+ A+ GAD A + S++G+ + P + A+V +L G
Sbjct: 762 IPIHVHTHDTSGAGVAAMLECAKAGADVVDAAV--DSMSGMTSQPSMGAIVASL-QGTKH 818
Query: 286 MCGASL 303
G SL
Sbjct: 819 DTGLSL 824
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 106 VPIETNYHEVIGIPMAMELKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTS 285
+PI + H+ G +A L+ A+ GAD A + S++G+ + P + A+V +L G
Sbjct: 762 IPIHVHTHDTSGAGVAAMLECAKAGADVVDAAV--DSMSGMTSQPSMGAIVASL-QGTKH 818
Query: 286 MCGASL 303
G SL
Sbjct: 819 DTGLSL 824
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 480 GYDYPRTGRIHKCDPADLPAPLTSP 554
GY+Y ++ R CDPADL +P++SP
Sbjct: 430 GYNYAKS-RKRPCDPADLHSPISSP 453
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.44
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 393 SGAETQLKRASLSAPGPPAVSRGHGASVA-QQGGSAHGGATVGQSNHHSGKMWMSA*PRH 217
+ A L S P PPA S H S GGS+ GG + G S+ G +A
Sbjct: 144 ASAPVSLPAPSYGGPPPPAPSFSHAPSGGYSSGGSSGGGYSSGGSSGGGGYAGGAAAAGA 203
Query: 216 TASYDPGAVEVSA 178
TA+ A E SA
Sbjct: 204 TAAQVDEASETSA 216
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 4.1
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 285 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 461
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 462 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 566
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 4.1
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 285 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 461
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 462 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 566
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 4.1
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 285 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 461
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 462 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 566
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 435 SNARQLQHGQSSQRRGYDYPRTGRIHKCDPADLPAPLT 548
S ARQLQH S RG R+ H+ DP + P T
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPST 810
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 435 SNARQLQHGQSSQRRGYDYPRTGRIHKCDPADLPAPLT 548
S ARQLQH S RG R+ H+ DP + P T
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPST 810
>Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical
protein K12F2.2b protein.
Length = 582
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 435 SNARQLQHGQSSQRRGYDYPRTGRIHKCDPADLPAPLT 548
S ARQLQH S RG R+ H+ DP + P T
Sbjct: 289 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPST 326
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 261 YSDRRSHLHVRSLPAEPHSLR---DRGSLLEDQERSRTHASIGFRHH 392
++ R H R LPA H+LR GSL+ +E TH G+ H+
Sbjct: 30 FASSRPHYERRQLPAMQHTLRHNHSMGSLMGPRELPFTH---GYHHN 73
>AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein.
Length = 582
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 435 SNARQLQHGQSSQRRGYDYPRTGRIHKCDPADLPAPLT 548
S ARQLQH S RG R+ H+ DP + P T
Sbjct: 289 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPST 326
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 435 SNARQLQHGQSSQRRGYDYPRTGRIHKCDPADLPAPLT 548
S ARQLQH S RG R+ H+ DP + P T
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPST 810
>Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical
protein T22C8.5 protein.
Length = 166
Score = 27.5 bits (58), Expect = 7.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 478 RRCEDCPCCSCRAFEH 431
R+CE C C +C+A +H
Sbjct: 53 RKCERCTCPNCKAIKH 68
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -2
Query: 423 VNSESTSEELSGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNH 256
+++ES+ ++ S + + APG A ++ +Q GG GG + +H
Sbjct: 381 MSTESSLDDKSAVKIPKRGRPCKAPGTTATNKSTKRKESQDGGQEVGGPVEDKDDH 436
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -2
Query: 423 VNSESTSEELSGAETQLKRASLSAPGPPAVSRGHGASVAQQGGSAHGGATVGQSNH 256
+++ES+ ++ S + + APG A ++ +Q GG GG + +H
Sbjct: 443 MSTESSLDDKSAVKIPKRGRPCKAPGTTATNKSTKRKESQDGGQEVGGPVEDKDDH 498
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 315 SVAQQGGSAHGGATVGQSNHHSG 247
S GG HGG G S+HH G
Sbjct: 168 SCEAHGGGHHGGGGGGGSHHHGG 190
>U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical
protein T01B6.3a protein.
Length = 465
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 187 FDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMC 291
FDG V +V L H H+AA V+T TD + C
Sbjct: 168 FDGKTKVKAAVHALSQHGHIAA-VVTNTDKYQAEC 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,246,885
Number of Sequences: 27780
Number of extensions: 201310
Number of successful extensions: 770
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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