BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c18r
(736 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 43 3e-06
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 42 6e-06
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 42 6e-06
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 26 0.32
U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 24 1.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 3.0
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 6.9
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 6.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.1
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 9.1
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 9.1
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 9.1
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 43.2 bits (97), Expect = 3e-06
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Frame = -3
Query: 536 DFASDYYFNYAVQRSIKKSLADGNKEVYYYVFSYDGGRNAMKEYLGITAEGAAHADELGY 357
D DY+F + AD +VYYY F+ N E++G+ H DE+ Y
Sbjct: 449 DVVGDYFF-ICPSIHFAQLFADRGMKVYYYFFTQRTSTNLWGEWMGV-----LHGDEVEY 502
Query: 356 LLAVDAVPGQHIAEEDQLIIDRITTLWANFAKYGNPTPEPTDLLPVVWSTVEGNKRPYLD 177
+ +++++ + R+ ++ FA G PT E ++ W + ++ Y
Sbjct: 503 VFGHPLNKSLKYSDKERDLSLRMILYFSEFAYLGKPTKEDSE-----WPSYSRDEPKYFI 557
Query: 176 IDTD-LQLRSRPFHHRMAFWDLFY-KLYG 96
D + L P AFW+ F KL G
Sbjct: 558 FDAEKTGLGKGPRTTYCAFWNEFLPKLKG 586
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 41.9 bits (94), Expect = 6e-06
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = -3
Query: 596 VRHFYIGDETLTEKQFDEFIDFASDYYFNYAVQRSIKKSLADGNKEVYYYVFSYDGGRNA 417
+R++Y + E ID ASD +F +++ + + V++Y ++Y G +
Sbjct: 390 IRNYYFESNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVWFYYYTYKGAHSI 449
Query: 416 MKEYLGITAE-GAAHADELGYLLAVDAVPGQHIAEEDQLIIDRITTLWANFAKYGNPTPE 240
+ G + + G HAD+ Y++ D + + W +F G P
Sbjct: 450 SEIMSGTSNKYGVCHADD-AYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVP--- 505
Query: 239 PTDLLPVVWSTVEGNKRP--YLDI--DTDLQLRSRPFHHRMAFWD 117
++ V W + N++ YL I +Q+ S R FW+
Sbjct: 506 --NVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGREDFWN 548
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 41.9 bits (94), Expect = 6e-06
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Frame = -3
Query: 596 VRHFYIGDETLTEKQFDEFIDFASDYYFNYAVQRSIKKSLADGNKEVYYYVFSYDGGRNA 417
+R++Y + E ID ASD +F +++ + + V++Y ++Y G +
Sbjct: 390 IRNYYFESNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVWFYYYTYKGAHSI 449
Query: 416 MKEYLGITAE-GAAHADELGYLLAVDAVPGQHIAEEDQLIIDRITTLWANFAKYGNPTPE 240
+ G + + G HAD+ Y++ D + + W +F G P
Sbjct: 450 SEIMSGTSNKYGVCHADD-AYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVP--- 505
Query: 239 PTDLLPVVWSTVEGNKRP--YLDI--DTDLQLRSRPFHHRMAFWD 117
++ V W + N++ YL I +Q+ S R FW+
Sbjct: 506 --NVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGREDFWN 548
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 26.2 bits (55), Expect = 0.32
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 536 DFASDYYFNYAVQRSIKKSLADGNKEVYYYVFSYDGGRNAM 414
D DY+F + AD +VYYY F+ NAM
Sbjct: 449 DVVGDYFF-ICPSIHFAQLFADRGMKVYYYFFTQRTSTNAM 488
>U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor
protein.
Length = 129
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 221 VVWSTVEGNKRPYLDID 171
V+ T EG RP LDID
Sbjct: 43 VIQGTKEGKSRPSLDID 59
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 605 EDHVRHFYIGDETLTEKQFDEFI 537
E H + ++ G +++ FDEF+
Sbjct: 298 ERHQKRYFFGRDSVDHVDFDEFL 320
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 188 PYLDIDTDLQLRSRPFHH 135
PY DI +++LR RP +
Sbjct: 199 PYPDITYEIRLRRRPMFY 216
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 557 KQFDEFIDFASDYYFNYAVQ 498
KQ DEF++ + DY+ N +Q
Sbjct: 518 KQCDEFVEDSDDYW-NCVIQ 536
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 127 PSGISSISSMENWNARNNSRNKR*TSTRYGLYDDRNIN 14
P ISS+S+ ++ NN N + Y NIN
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 127 PSGISSISSMENWNARNNSRNKR*TSTRYGLYDDRNIN 14
P ISS+S+ ++ NN N + Y NIN
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 127 PSGISSISSMENWNARNNSRNKR*TSTRYGLYDDRNIN 14
P ISS+S+ ++ NN N + Y NIN
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 127 PSGISSISSMENWNARNNSRNKR*TSTRYGLYDDRNIN 14
P ISS+S+ ++ NN N + Y NIN
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNIN 116
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 425 RNAMKEYLGITAEGAAHAD 369
RN+ K+ L +GA H D
Sbjct: 240 RNSTKDTLNSVVQGAIHGD 258
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 9.1
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +3
Query: 120 PEGHPVVEGPASELQVGVDVQIRPLVTFYCRPHDRQQVRRLRGGVTVFGKI 272
P G +V A L V I PL+ + + HD V L G + G I
Sbjct: 294 PVGTLIVGALAGLLSVLGYKYITPLIQKHLKIHDTCGVHNLHGMPGILGGI 344
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 596 VRHFYIGDETLTEKQFDEFIDFA 528
V F IG + + FD+++D+A
Sbjct: 207 VMDFQIGLQRKKDTTFDDYLDYA 229
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 596 VRHFYIGDETLTEKQFDEFIDFA 528
V F IG + + FD+++D+A
Sbjct: 207 VMDFQIGLQRKKDTTFDDYLDYA 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,307
Number of Sequences: 438
Number of extensions: 4097
Number of successful extensions: 35
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -