Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c18r
(736 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73480.1 68414.m08507 hydrolase, alpha/beta fold family prote... 32 0.34
At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR... 31 0.60
At3g58220.1 68416.m06491 meprin and TRAF homology domain-contain... 31 1.0
At1g68060.1 68414.m07775 expressed protein 29 2.4
At1g24764.1 68414.m03106 expressed protein 29 2.4
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 29 3.2
At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similari... 29 4.2
At2g40750.1 68415.m05026 WRKY family transcription factor contai... 28 7.4
At2g01750.1 68415.m00104 expressed protein 28 7.4
At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 / 4-coumaroyl... 28 7.4
At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein si... 28 7.4
At2g40120.1 68415.m04934 protein kinase family protein contains ... 27 9.8
>At1g73480.1 68414.m08507 hydrolase, alpha/beta fold family protein
low similarity to monoglyceride lipase from [Homo
sapiens] GI:14594904, [Mus musculus] GI:2632162;
contains Pfam profile PF00561: hydrolase, alpha/beta
fold family
Length = 463
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 695 LHAYVTPEDYEVTGIRAFLERAF 627
LHAYV DY VT +++FLE+ F
Sbjct: 255 LHAYVPSLDYAVTDLKSFLEKVF 277
>At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 992
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = -3
Query: 680 TPEDYEVTGIRAFLERAFNLTDNDMEDHVRHFYIGDETLTEKQFDEFIDFASDYYFNYAV 501
T +D+E I LE +F+ D ++E +R +G + L EK D+ + ++FNY
Sbjct: 357 TEDDWE--DILHRLESSFDSVDRNIERVLR---VGYDGLHEK--DQLLFLLIAFFFNYKD 409
Query: 500 QRSIKKSLADGNKEV 456
+K LAD N V
Sbjct: 410 DDHVKAMLADNNLNV 424
>At3g58220.1 68416.m06491 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 487
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 719 VTNKEFLTLHAYVTPEDYEVTGIRAFLERAFNLTDNDMEDHVRH-FYIGDETLTEKQFDE 543
V KE + Y + EDYE I F + + D E+ R F E +++K ++E
Sbjct: 200 VYKKESEEGYKYESEEDYEKRPIERFEYESEAESKKDYEERTRGGFEYESEPVSKKDYEE 259
Query: 542 FIDFASDYYFNYAVQRSIKKSLADGNKEVYYY 447
F Y + KK +G++E Y Y
Sbjct: 260 ----RPRESFEYESEAESKKDSEEGSRERYEY 287
>At1g68060.1 68414.m07775 expressed protein
Length = 622
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 336 DRIHGQQVAELVRVRSALRRYAE-VLLHGIPASVVREH 446
DR+H Q+VAE+ ++ +R E VL G A+ VR++
Sbjct: 252 DRMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDY 289
>At1g24764.1 68414.m03106 expressed protein
Length = 607
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 336 DRIHGQQVAELVRVRSALRRYAE-VLLHGIPASVVREH 446
DR+H Q+VAE+ ++ +R E VL G A+ VR++
Sbjct: 260 DRMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDY 297
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -1
Query: 268 LPNTVTPPLSRRTCCRSCGRQ*KVTSGRIWTSTPTCS--SEAGPSTTGWPSGISSISSME 95
L + +S RTCC CG + W S +C GP+ T + +++ +
Sbjct: 256 LSTSTEEDVSTRTCCVKCGEPFCINCKVPWHSNLSCDDYKRLGPNPTKNDIKLKVLANQQ 315
Query: 94 NWN 86
W+
Sbjct: 316 KWS 318
>At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similarity
to elicitor inducible beta-1,3-glucanase NtEIG-E76
[Nicotiana tabacum] GI:11071974
Length = 222
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Frame = -1
Query: 277 GLILPNTVTPPLSRRTCCRSCGRQ*KVTSGRIWTSTPTCSS------EAGPSTTGWPSGI 116
G P+T TPP + C T+G T TPT + G TTG P+
Sbjct: 87 GAASPST-TPPSTASNCLTGSSSSGTPTTGTPTTGTPTSGTPTTGTPTTGTPTTGTPTSG 145
Query: 115 SSISSMENWNARNNSRN 65
+ S N N N
Sbjct: 146 TPTSGFPNTGTPNTGTN 162
>At2g40750.1 68415.m05026 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 346
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = -3
Query: 605 EDHVRHFYIGDETLTEKQF------DEFIDFASDYYFNY 507
+DH H+Y G+ + T QF D+F F Y +Y
Sbjct: 302 DDHQNHYYCGETSTTSHQFGFIDNDDQFSSFFDSYCADY 340
>At2g01750.1 68415.m00104 expressed protein
Length = 629
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 336 DRIHGQQVAELVRVRSALRRYAE-VLLHGIPASVVREH 446
D++H Q+VAE+ + +R E VL G A+ VR++
Sbjct: 259 DKLHRQKVAEVEKFTQTVRELEEAVLAGGTAANAVRDY 296
>At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 561
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 428 GRNAMKEYLGITAEGAAHADELGYLLAVDAVPGQHIAEEDQL-IIDRITTLWANFAKYGN 252
G+ MKEYL +A DE G+L D ++ E+D++ I+DR+ + F +
Sbjct: 416 GQQIMKEYLNDPEATSATIDEEGWLHTGDI---GYVDEDDEIFIVDRLKEV-IKFKGFQV 471
Query: 251 PTPEPTDLL 225
P E LL
Sbjct: 472 PPAELESLL 480
>At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase precursor GI:4097948 from
[Oryza sativa]
Length = 426
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -3
Query: 287 TTLWANFAKYGNPTPEPTDLLPVVWS 210
T++ N+ + G+ P PTD++P++ S
Sbjct: 27 TSIGVNYGQIGDNLPSPTDVIPLIKS 52
>At2g40120.1 68415.m04934 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 570
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = -3
Query: 644 FLERAFNLTDNDMEDHVRHFYI--GDE-TLTEKQFDEFIDFASDY-YFNYAVQRSIKKSL 477
+L++ F L D +ED + GD+ +T+++ D + +Y FN + ++
Sbjct: 184 YLDKPF-LLDIGLEDKTDELDLKTGDQLNVTDEEVDVVHEVEDEYEVFNLRIIHWKNRTG 242
Query: 476 ADGNKEVYYYVFSYDGGRNAMKEYLGITA 390
+ NK++ + + GGR + EY+G A
Sbjct: 243 FEENKDLPIVINTVIGGRYYITEYIGSAA 271
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,763,423
Number of Sequences: 28952
Number of extensions: 285367
Number of successful extensions: 857
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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