Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c18f
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4) 65 5e-11
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 54 7e-08
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 54 1e-07
SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 46 2e-05
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 46 3e-05
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05) 44 8e-05
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 44 1e-04
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 43 2e-04
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21) 35 0.064
SB_9459| Best HMM Match : Transp_Tc5_C (HMM E-Value=6.4) 30 1.8
SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_47746| Best HMM Match : T-box (HMM E-Value=1.8e-23) 28 5.6
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 27 9.7
SB_6690| Best HMM Match : CC (HMM E-Value=2.9) 27 9.7
>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 73.7 bits (173), Expect = 1e-13
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Frame = +3
Query: 222 IDPLVDTQRGLIRGLRS--ENGKFS-KFLGIPYALVDE-NNPFGPSVPHPGFEETFEAYD 389
+ ++ T+ G +RGLR +NG + KFLGIPYA P P+ + +T +A +
Sbjct: 30 VTAVISTEYGPVRGLRHSLKNGNIAVKFLGIPYATASRFERPRNPAK----WTQTLDAVN 85
Query: 390 DSVVCPQVTKGVGVGSLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFD 569
V CPQ G V CL LNVY P+ AT + PV+V+IH D S
Sbjct: 86 PKV-CPQT--GEQVVDENCLTLNVYKPS-ATRNSSLPVLVFIHGGAFMRFSAHEDDPSLL 141
Query: 570 DLVRHDVIVVSVSYRLGLYGFLC 638
++VV+++YRLG+ GFLC
Sbjct: 142 -ATEQGIMVVTINYRLGILGFLC 163
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 66.9 bits (156), Expect = 1e-11
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Frame = +3
Query: 222 IDP-LVDTQRGLIRG---LRSENGKFSKFLGIPYALVDENNPFGPSVPHPGFEETFEAYD 389
I+P +++T G + G L N + +FLGIPYA +P P P +T +
Sbjct: 30 IEPGVINTTYGPVEGKNVLLQTNKEVVQFLGIPYANASRFDP--PEPPTSWHNDTRQTKT 87
Query: 390 DSVVCPQVTKG----VGVGSLQ--CLNLNVYVPNTATSRNKR---PVMVWIHXXXXXXXX 542
CPQ + S+ CLNLNV+VPNT RN+ PVMVW+
Sbjct: 88 YGKSCPQAMNSAPHYLDSDSISEYCLNLNVFVPNTTEFRNESASYPVMVWVQGGAFIMGT 147
Query: 543 XXXRDYSFDDLVRHDVIVVSVSYRLGLYGFL 635
+ + +++VVS++YRLG GFL
Sbjct: 148 SARQSDASLLATEGEIVVVSINYRLGALGFL 178
>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
Length = 195
Score = 64.9 bits (151), Expect = 5e-11
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Frame = +3
Query: 228 PLVDTQRGLIRGLR---SENGKFSKFLGIPYALVDENNPFGPSVPHPGFEETFEAYDDSV 398
P+VDT G +RGL +++GIP+A + P P P + T +A+ +
Sbjct: 26 PVVDTTNGPVRGLTVTLPTGHAVRRYMGIPFAKAERFK--APVDPTP-WTSTRDAFVNGK 82
Query: 399 VCPQ-VTKGV-----GVGSLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDY 560
+CPQ +T+ + S CLNL+++VPN + + VMVWI+ D
Sbjct: 83 MCPQDLTEYMEQFTTNDMSEDCLNLDMFVPNNTAAGAMKSVMVWIYGGAFVSGANRLYDG 142
Query: 561 SFDDLVRHDVIVVSVSYRLGLYGFL 635
S DVIVV V+YR+G++GFL
Sbjct: 143 SVIS-GEGDVIVVVVNYRVGIFGFL 166
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 60.9 bits (141), Expect = 9e-10
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +3
Query: 291 KFLGIPYALVDENNPFGPSVPHPGFEETFEAYDDSVVCPQVT-----KGVGVGSLQCLNL 455
K+LG+P+A + P P P ++E +A +CPQV + + S CL L
Sbjct: 47 KYLGVPFAKAERFE--NPQPPTP-WKEVKQAILPGKICPQVEIPIAGQTTAIMSEDCLIL 103
Query: 456 NVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVRHDVIVVSVSYRLGLYGFL 635
+VY PN S PVMV+IH D SF + + VIVV + YRLG++G+L
Sbjct: 104 DVYAPNITNS--SLPVMVFIHGGGFFAGGARSFDGSFQATIGN-VIVVVIQYRLGVFGYL 160
>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 58.0 bits (134), Expect = 6e-09
Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 297 LGIPYALVDENNPFGPSVPHPGFEETFEAYDDSVVCPQVTKGVGVG------SLQCLNLN 458
+GIP+A + P P P + T A++ +CPQ S CLNLN
Sbjct: 1 MGIPFAKAERFK--APVNPEP-WTTTKNAFNFGKICPQAITPYTANFKTSEMSEDCLNLN 57
Query: 459 VYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLV-RHDVIVVSVSYRLGLYGFL 635
V+VPN + + VMVWI+ R Y L DVIVV V+YR+G++GFL
Sbjct: 58 VFVPNNTAAGAMKSVMVWIY--GGGFMNGANRLYESSILAGEGDVIVVVVNYRVGIFGFL 115
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 55.6 bits (128), Expect = 3e-08
Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Frame = +3
Query: 231 LVDTQRGLIRGLRSENGKFSKFLGIPYALVDENN-----PFGPSVPHPGFEETFEAYDDS 395
L+ T G IRG R+ N F GIPYA N+ PF P + ++ TF A
Sbjct: 1036 LIATDGGTIRGTRNSNAWV--FKGIPYAKPPINDMRWKPPF-PCGHNHCWQGTFNAAFYG 1092
Query: 396 VVCPQV-TKGVGVGSLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRD-YSFD 569
VCPQ+ ++ +GS CL LNV+ P+ K+PV+V+IH +
Sbjct: 1093 KVCPQLNSEDQVIGSEDCLYLNVWTPSVDI---KQPVLVFIHGGELTYGSGHDSGIHPTP 1149
Query: 570 DLVRH-DVIVVSVSYRLGLYGFL 635
+ V + V+ +S +YRL +GFL
Sbjct: 1150 EFVSNLGVVGISFNYRLNAFGFL 1172
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 54.4 bits (125), Expect = 7e-08
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Frame = +3
Query: 246 RGLIRGLRSENG---KFSKFLGIPYALVDENN-PFGPSVPHPGFEETFEAYDDSVVC--- 404
RG+ R L + G K ++FLGIP+A F P VP +++ ++A + +C
Sbjct: 39 RGVTRHLAAIKGNITKINRFLGIPFASPPVKKLRFSPPVPPEPWDDVYDATNFKAMCFQD 98
Query: 405 PQVTKGVGVG-----SLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFD 569
P+ + G S CL LN+Y PN+ + K VMV+IH D
Sbjct: 99 PEYNRMFWTGFSWRQSDDCLYLNIYAPNSTGT--KYAVMVYIHGGGYEAGSPIISPG--D 154
Query: 570 DLVRHDVIVVSVSYRLGLYGFL 635
+ V++V++ YRLG +GF+
Sbjct: 155 AIPLWGVVLVTIQYRLGPFGFM 176
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 53.6 bits (123), Expect = 1e-07
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Frame = +3
Query: 231 LVDTQRGLIRGLRSENGKFS--------KFLGIPYALVDENN-PF-GPSVPHPGFEETFE 380
LV T++G +RGLR + S KFLG+PYA N F GP P +E
Sbjct: 23 LVRTKQGYVRGLRQQFDAKSEDNVDTVYKFLGVPYAEPPVKNLRFKGPIPPRSWAPSIYE 82
Query: 381 AYDDSVVCPQVTKGVGVGSLQ--------------CLNLNVYVPNTATSRNKRPVMVWIH 518
A + +C Q + G GS+ CL LN+Y P+ PV+ +IH
Sbjct: 83 ATEFKDICTQSYRHYG-GSINNAWPTFTEKRFSEDCLYLNIYTPSINPDGTHYPVIFYIH 141
Query: 519 XXXXXXXXXXXRDYSFDDLVRHDVIVVSVSYRLGLYGFL 635
+ L +++V+V YRLG++GFL
Sbjct: 142 GGGFFAGTPIRDVTPGEFLPLRGIVLVTVQYRLGIFGFL 180
>SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 52.4 bits (120), Expect = 3e-07
Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Frame = +3
Query: 228 PLVDTQRGLIRGLR---SENGKFSKFLGIPYALVDENNPFGPSVPHPGFEETFEAYDDSV 398
P+ T G +RG S +FLGIPYA + F + +EET EA +
Sbjct: 30 PIYKTNSGPVRGRSVHLSSKKTVHEFLGIPYAKAER---FAYPQKYK-WEETLEATQFTK 85
Query: 399 VCPQ-VTKGVGVGSL-----QCLNLNVYVP--NTATSRNKRPVMVWIHXXXXXXXXXXXR 554
CPQ V G +L CLNLN++VP T ++ V+VWI
Sbjct: 86 PCPQLVIPSKGAKTLYETTENCLNLNIFVPVKEGKTWKDSLAVVVWIAGLFYSYGNAVEM 145
Query: 555 DYSFDDLVRHDVIVVSVSYRLGLYGFL 635
D F +VIVV+++ RLG+ G+L
Sbjct: 146 DGRFL-ASNEEVIVVTLNNRLGVLGYL 171
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 435 SLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVR-HDVIVVSVSY 611
S CL ++VY P + +R VMV+IH RDY LV +DVIVV+++Y
Sbjct: 156 SEDCLTISVYTPQNSDPDKQRAVMVFIH--GGGFTSGASRDYDPSVLVALNDVIVVTINY 213
Query: 612 RLGLYGF 632
RLG+ GF
Sbjct: 214 RLGVLGF 220
>SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 47.6 bits (108), Expect = 9e-06
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 291 KFLGIPYALVDENNPFGPSVPHPGFEETF---EAYDDSVVCPQVTKGVGVGSLQCLNLNV 461
K+LGIP+A + P P P + + Y V P + + S CL L++
Sbjct: 47 KYLGIPFAKAERFE--NPQFPTPWRSKKWFNRGKYAHKVANPILGLTTELMSEDCLVLDI 104
Query: 462 YVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVRHDVIVVSVSYRLGLYGFL 635
Y PN S PVMV+IH D S V + VIVV YRLG++G+L
Sbjct: 105 YAPNITNS--SIPVMVFIHGGSYSFGGSRFYDGSALASVGN-VIVVIAQYRLGMFGYL 159
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 435 SLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVRHD-VIVVSVSY 611
S CL LNVY P +K PVMVWIH D S L H+ VIVV+++Y
Sbjct: 43 SEDCLFLNVYRPTKFN--HKLPVMVWIHGGGYYHATANWFDGSV--LASHNNVIVVTINY 98
Query: 612 RLGLYGFL 635
RL L GFL
Sbjct: 99 RLALLGFL 106
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 435 SLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVRH-DVIVVSVSY 611
S CL LN+Y P A S ++ PVMVW+H Y L H D+IVV++++
Sbjct: 504 SEDCLYLNIYRP--AHSHHRLPVMVWLHGGGNYVGSGNW--YHSSVLSSHNDIIVVTLNH 559
Query: 612 RLGLYGFL 635
RL L+GFL
Sbjct: 560 RLALFGFL 567
>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
Length = 452
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 228 PLVDTQRGLIRGLR---SENGKFSKFLGIPYALVDENNPFGPSVPHPGFEETFEAYDDSV 398
P+VDT G +RGL +++GIP+A + P P P + T A++
Sbjct: 25 PVVDTTNGPVRGLTVTLPTGHAVRRYMGIPFAKAERFK--APVNPEP-WTTTKNAFNFGK 81
Query: 399 VCPQVTKGVGVG------SLQCLNLNVYVPNTATSRNKRPVM 506
+CPQ S CLNLNV+VPN + + VM
Sbjct: 82 ICPQAITPYTANFKTSEMSEDCLNLNVFVPNNTAAGAMKSVM 123
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 44.0 bits (99), Expect = 1e-04
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Frame = +3
Query: 231 LVDTQRGLIRGLRSENGKFSKFLGIPYALVDENNPFGPSVPHPGFEETFEAYDDSVVCPQ 410
+V + G+ RG G + + GIPYA + P P E + C Q
Sbjct: 264 VVRIESGMARG--GTKGSANVYYGIPYAGTTKRFSL-PQPLLPTNETNNYTMANPKYCAQ 320
Query: 411 VTKGVG----VGSLQ-CLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDL 575
G V S + CL LNV+ P+ A + PV+V+I D S
Sbjct: 321 FELKEGLPFDVNSTEDCLTLNVHTPHDANENSSLPVLVYIGGDFFVAGSSNDVDGSV-LA 379
Query: 576 VRHDVIVVSVSYRLGLYGFL 635
V+VV+ +YRLG +GFL
Sbjct: 380 SNQKVVVVTFNYRLGAFGFL 399
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/67 (40%), Positives = 35/67 (52%)
Frame = +3
Query: 435 SLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVRHDVIVVSVSYR 614
S CL LNV+ P + PVMV+IH D + +DVIVV+++YR
Sbjct: 170 SEDCLFLNVFRPAGTKATKDLPVMVFIHGGGYYRGSGDVYDGT-PLAAYNDVIVVTMNYR 228
Query: 615 LGLYGFL 635
LGL GFL
Sbjct: 229 LGLLGFL 235
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/77 (33%), Positives = 35/77 (45%)
Frame = +3
Query: 405 PQVTKGVGVGSLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVRH 584
P + + S CL LN+ P +K PVMV+I D L
Sbjct: 125 PGIADPAAMLSEDCLYLNIVEPGEPPISDKYPVMVYIPGQDYSSGTSL--DSLGHALALK 182
Query: 585 DVIVVSVSYRLGLYGFL 635
+V+VVS+ YRLG +GFL
Sbjct: 183 EVVVVSIQYRLGPFGFL 199
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 39.5 bits (88), Expect = 0.002
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 27/156 (17%)
Frame = +3
Query: 249 GLIRGLRSENG---KFSKFLGIPYALVDENN-PFGPSVP-HPGFEETFEAYDDSVVCPQV 413
GL + L S G K +KFLGIPYA + F P P P E+ + A +C Q
Sbjct: 99 GLAQTLASAQGPARKINKFLGIPYAQQPIGDLRFKPPQPLKPWKEKIYNATSFGNICVQS 158
Query: 414 TKGVGV--GSLQ--------------CLNLNVYVP------NTATSRNKRPVMVWIHXXX 527
S++ CLNLN+Y P ++ +R PV+ +IH
Sbjct: 159 KLYFEFLKSSIRRTWPDFSKKNMREDCLNLNIYTPAWPDISDSVQTRKAYPVLFYIHGGS 218
Query: 528 XXXXXXXXRDYSFDDLVRHDVIVVSVSYRLGLYGFL 635
+ ++ +++V++ YRLG+ GFL
Sbjct: 219 YYLGTPNRVKTPGEIAPQYGIVLVTIHYRLGVLGFL 254
>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
Length = 424
Score = 34.7 bits (76), Expect = 0.064
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 561 SFDDLVRHDVIVVSVSYRLGLYGF 632
+ ++L HDVIVV+++YRLG+ GF
Sbjct: 134 TLEELALHDVIVVTINYRLGVLGF 157
>SB_9459| Best HMM Match : Transp_Tc5_C (HMM E-Value=6.4)
Length = 141
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 397 TESSYASNVSSKPGCGTDGPKGLFSSTSAY 308
++SS +S VS+ C +D P+G F STS Y
Sbjct: 48 SDSSESSFVSASQYCNSDFPQGSFVSTSQY 77
>SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 364 KPGCGTDGPKGLFSSTSA---YGMPKNFENFPFSDLSPLMRPR*VSTSGS 224
KP ++ +G FSST + Y P+N + + F +SP + R + S +
Sbjct: 852 KPQTSSETEEGYFSSTPSPFDYDKPRNLDQYSFKPISPRLGGRTIRGSNN 901
>SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -3
Query: 361 PGCGTDGPKGLFSSTSAYGMPKNFENFPFSDLSPLMRPR*VSTSGSILNRAATADNKPKR 182
P CG G A P+ + FP + LSPL + + GS+ N+ + NK +
Sbjct: 170 PDCGVSAWWGTKRLDYALYCPEGLQQFPTAVLSPLFHEKNIKYQGSV-NKYQGSVNKFQG 228
Query: 181 ATNR 170
+ N+
Sbjct: 229 SVNK 232
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 436 LPTPTPLVT*GQTTESSYASNVSSKPGCGTDGPKGLFSSTSAYGMP 299
L P+ VT ++ S S+VSSK C P+ + +TS+ G+P
Sbjct: 616 LKAPSYAVTKTVSSPSPLGSSVSSKENCVGMRPEAMACATSSCGLP 661
>SB_47746| Best HMM Match : T-box (HMM E-Value=1.8e-23)
Length = 390
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 225 LSSTGQPLLTTSPKEQPIA---AYLHWKCAVCALSDILYKTG 109
L+ G P L T+P+E +A + L WK C ++ +TG
Sbjct: 129 LAYKGDPRLVTAPREVQVALQQSELWWKFYACGTEMVITRTG 170
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -1
Query: 381 LRMSLRNQGVVLMARKDCSRRLVRTVCPKTSRTFHFRTSVP 259
+R L + G V ++ RRL++++C + + TS+P
Sbjct: 505 MRERLDSSGGVCRSQSSTIRRLMKSICEQIKCVYRLTTSIP 545
>SB_6690| Best HMM Match : CC (HMM E-Value=2.9)
Length = 183
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = -3
Query: 394 ESSYASNVSSKPGCGTDGPKGLFSSTSAYGMPKNFENFPFSDLSPLMRPR*VSTSGSILN 215
+ S S + G GT GP GL S+ YGM ++ + P D+SP R + + +
Sbjct: 35 QMSQLSQLMGLMGEGT-GP-GLPSAEQLYGMLRSMQQRPTDDISPSQGTRDSGANKAKRS 92
Query: 214 RAATADNKPKRATNRS 167
++ +KP + +++
Sbjct: 93 LDSSFPSKPPKQNSQA 108
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,768,972
Number of Sequences: 59808
Number of extensions: 408965
Number of successful extensions: 1355
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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