Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c18f
(639 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 57 2e-10
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 57 2e-10
AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein. 38 1e-04
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 32 0.005
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 32 0.005
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 29 0.029
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 22 5.8
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 5.8
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 22 5.8
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 7.6
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.6
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 56.8 bits (131), Expect = 2e-10
Identities = 50/147 (34%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Frame = +3
Query: 228 PLVDTQRGLIRGLR--SENGK-FSKFLGIPYALVDENNPFGPSVPH--PGFEETFEAYDD 392
P V T G I+G S NGK + + GIPYAL F P P + A
Sbjct: 23 PRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGK-FRFKAPQKIPAWIGELSATKF 81
Query: 393 SVVCPQVT------KGVGVGSLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXR 554
C Q T + G+ CL LNVYVP T PV+ WIH
Sbjct: 82 GFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGSGIPM 141
Query: 555 DYSFDDLVRHDVIVVSVSYRLGLYGFL 635
+ L+ DVI V+++YRLG+ GFL
Sbjct: 142 GAKY--LMDSDVIFVTINYRLGILGFL 166
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 56.8 bits (131), Expect = 2e-10
Identities = 50/147 (34%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Frame = +3
Query: 228 PLVDTQRGLIRGLR--SENGK-FSKFLGIPYALVDENNPFGPSVPH--PGFEETFEAYDD 392
P V T G I+G S NGK + + GIPYAL F P P + A
Sbjct: 23 PRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGK-FRFKAPQKIPAWIGELSATKF 81
Query: 393 SVVCPQVT------KGVGVGSLQCLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXR 554
C Q T + G+ CL LNVYVP T PV+ WIH
Sbjct: 82 GFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGSGIPM 141
Query: 555 DYSFDDLVRHDVIVVSVSYRLGLYGFL 635
+ L+ DVI V+++YRLG+ GFL
Sbjct: 142 GAKY--LMDSDVIFVTINYRLGILGFL 166
>AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein.
Length = 62
Score = 37.5 bits (83), Expect = 1e-04
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 444 CLNLNVYVPNTATSRNKRPVMVWIHXXXXXXXXXXXRDYSFDDLVRHDVIVVSVSYRLGL 623
CL L+VY T + +PVM ++H + D L+ DV+VVS +YR+G
Sbjct: 4 CLYLDVY---TNSLDQSKPVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYRVGA 60
Query: 624 YG 629
+G
Sbjct: 61 FG 62
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.005
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Frame = +3
Query: 435 SLQCLNLNVYVPNTATSRNKR---------------PVMVWIHXXXXXXXXXXXRDYSFD 569
S CL LN++VP R+K P++VWI+ Y+ D
Sbjct: 123 SEDCLYLNIWVPQKYRLRHKGDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTATLDVYNAD 182
Query: 570 DLVR-HDVIVVSVSYRLGLYGFL 635
+ +VI+ S+ YR+G +GFL
Sbjct: 183 IMAATSNVIIASMQYRVGAFGFL 205
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 31.9 bits (69), Expect = 0.005
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Frame = +3
Query: 435 SLQCLNLNVYVPNTATSRNKR---------------PVMVWIHXXXXXXXXXXXRDYSFD 569
S CL LN++VP R+K P++VWI+ Y+ D
Sbjct: 123 SEDCLYLNIWVPQKYRLRHKGDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTATLDVYNAD 182
Query: 570 DLVR-HDVIVVSVSYRLGLYGFL 635
+ +VI+ S+ YR+G +GFL
Sbjct: 183 IMAATSNVIIASMQYRVGAFGFL 205
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 29.5 bits (63), Expect = 0.029
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 573 LVRHDVIVVSVSYRLGLYGFL 635
L+ DVI V+++YRLG+ GFL
Sbjct: 17 LMDSDVIFVTINYRLGILGFL 37
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 88 LDARCATNRGRAIERTMSTSTRVGCS 11
LD TN GR +++ + + GC+
Sbjct: 48 LDEGPCTNEGRELKKILPDALSTGCN 73
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 201 LTTSPKEQPIAAYLHWKCAVCALSDIL 121
L P + AYL KCA+ L+D L
Sbjct: 149 LNLLPMNRNRPAYLASKCALTTLTDCL 175
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 88 LDARCATNRGRAIERTMSTSTRVGCS 11
LD TN GR +++ + + GC+
Sbjct: 48 LDEGPCTNEGRELKKILPDALSTGCN 73
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = -3
Query: 331 LFSS--TSAYGMPKNFENFP 278
L+SS T G P N ENFP
Sbjct: 119 LYSSRLTIKAGCPMNLENFP 138
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 111 GSHFRQNTWTPD 76
GS F +N W PD
Sbjct: 86 GSEFIKNIWVPD 97
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 111 GSHFRQNTWTPD 76
GS F +N W PD
Sbjct: 86 GSEFIKNIWVPD 97
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 111 GSHFRQNTWTPD 76
GS F +N W PD
Sbjct: 25 GSEFIKNIWVPD 36
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -1
Query: 240 YQQAGLSSTGQPLLTTSPKEQPIAAYLHWKCA 145
Y Q G +PLLT + ++ P +CA
Sbjct: 1090 YNQVGSGPLSEPLLTQTMEDVPSIPPEDVRCA 1121
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -1
Query: 240 YQQAGLSSTGQPLLTTSPKEQPIAAYLHWKCA 145
Y Q G +PLLT + ++ P +CA
Sbjct: 1086 YNQVGSGPLSEPLLTQTMEDVPSIPPEDVRCA 1117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,867
Number of Sequences: 438
Number of extensions: 3487
Number of successful extensions: 24
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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