Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12c17f
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.20 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.79 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.79 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   5.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 193 ISFRNLFWHSFLVQFYTTVFNFNNNLIVSLL 101
           I+F    W  F +   T  +NFN N I S L
Sbjct: 405 ITFMRTVWKFFNIFLITPFYNFNENTIHSKL 435


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 0.79
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 216 ISVLVLAQFRFGIFFGTHF--WFNSIRPFSILTIILSFHYCLYYNCL*TRNHVLTQ 55
           ++++  A +++G    + F  +   I P+ I  +++   YC Y N L  R  +L +
Sbjct: 160 VTIIFFASYQYGTKTYSLFIVFMTVILPYFI-NLLMELQYCHYLNILRVRYQLLNE 214


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 0.79
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 216 ISVLVLAQFRFGIFFGTHF--WFNSIRPFSILTIILSFHYCLYYNCL*TRNHVLTQ 55
           ++++  A +++G    + F  +   I P+ I  +++   YC Y N L  R  +L +
Sbjct: 160 VTIIFFASYQYGTKTYSLFIVFMTVILPYFI-NLLMELQYCHYLNILRVRYQLLNE 214


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 126 TIILSFHYCLYYNCL*TRNHV 64
           TI+ SF YC YYN   T++ V
Sbjct: 267 TIVFSFCYC-YYNSKMTKDGV 286


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 245 PDISPVTKPESAYSSSRNFVSESFL 171
           P  SPV+KP S  S     + E FL
Sbjct: 42  PIYSPVSKPVSFESLPNRRLHEEFL 66


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 79  NTEPCFDTKMSRNKQPHY 26
           N+E CF  K+   K P +
Sbjct: 521 NSEMCFSLKLKNKKLPPF 538


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 135 SILTIILSFHYCLYYNCL*TRNHVLTQKCRVINSL 31
           ++LTI L F  C +     +  H+L +  R I+S+
Sbjct: 453 TLLTIGLYFQLCEFSRLNFSVEHLLMELSRAIDSV 487


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,389
Number of Sequences: 336
Number of extensions: 1891
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)