Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c17f
(461 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76638-1|AAB21124.1| 900|Homo sapiens p50-NF-kappa B homolog pr... 31 2.5
U09609-1|AAA21462.2| 669|Homo sapiens p80HT protein. 29 7.8
BX546486-4|CAI16969.1| 766|Homo sapiens novel protein protein. 29 7.8
BX546486-3|CAM23768.1| 4621|Homo sapiens novel protein protein. 29 7.8
BX546486-2|CAI16968.1| 841|Homo sapiens novel protein protein. 29 7.8
BT009769-1|AAP88771.1| 899|Homo sapiens nuclear factor of kappa... 29 7.8
BC063799-1|AAH63799.1| 839|Homo sapiens NBPF10 protein protein. 29 7.8
BC002844-1|AAH02844.1| 899|Homo sapiens nuclear factor of kappa... 29 7.8
AY894574-1|AAX85113.1| 942|Homo sapiens NBPF9 isoform 2 protein. 29 7.8
AY865619-1|AAW56071.1| 900|Homo sapiens nuclear factor of kappa... 29 7.8
AL121928-1|CAC08399.1| 900|Homo sapiens nuclear factor of kappa... 29 7.8
AK000726-1|BAA91343.1| 766|Homo sapiens protein ( Homo sapiens ... 29 7.8
>S76638-1|AAB21124.1| 900|Homo sapiens p50-NF-kappa B homolog
protein.
Length = 900
Score = 30.7 bits (66), Expect = 2.5
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 214 DSGFVTGEISGPCDSNDIDSGMIDYDEKNSEGESGVKSITDRLSQVMVSVQSPAQSTADI 393
DSG E S P + D+ + ++ E + + + R ++ ++ A A +
Sbjct: 415 DSGEEAAEPSAPSRTPQCDAQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADRRALL 474
Query: 394 P-PLYLLFQQDEDGDTQLHXASV 459
+LL QDE+GDT LH A +
Sbjct: 475 AGQRHLLTAQDENGDTPLHLAII 497
>U09609-1|AAA21462.2| 669|Homo sapiens p80HT protein.
Length = 669
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 214 DSGFVTGEISGPCDSNDIDSGMIDYDEKNSEGESGVKSITDRLSQVMVSVQSPAQSTADI 393
DSG E S P + + + ++ E + + + R ++ ++ A + A +
Sbjct: 415 DSGEEAAEPSAPSRTPQCEPQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADARALL 474
Query: 394 P-PLYLLFQQDEDGDTQLHXASV 459
+LL QDE+GDT LH A +
Sbjct: 475 AGQRHLLTAQDENGDTPLHLAII 497
>BX546486-4|CAI16969.1| 766|Homo sapiens novel protein protein.
Length = 766
Score = 29.1 bits (62), Expect = 7.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 172 KKDSETKLREDEYADSGFVTGEISGPCDSNDIDSGM---IDYDEKNS----EGESGVKSI 330
+K E+K+ ED + GPCDSN + + DE NS + ES
Sbjct: 117 QKTEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDEC 176
Query: 331 TDRLSQVMVSVQSPAQSTADI 393
D L+ ++ V P S ++
Sbjct: 177 QDALN--ILPVPGPTSSATNV 195
>BX546486-3|CAM23768.1| 4621|Homo sapiens novel protein protein.
Length = 4621
Score = 29.1 bits (62), Expect = 7.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 172 KKDSETKLREDEYADSGFVTGEISGPCDSNDIDSGM---IDYDEKNS----EGESGVKSI 330
+K E+K+ ED + GPCDSN + + DE NS + ES
Sbjct: 192 QKTEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDEC 251
Query: 331 TDRLSQVMVSVQSPAQSTADI 393
D L+ ++ V P S ++
Sbjct: 252 QDALN--ILPVPGPTSSATNV 270
>BX546486-2|CAI16968.1| 841|Homo sapiens novel protein protein.
Length = 841
Score = 29.1 bits (62), Expect = 7.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 172 KKDSETKLREDEYADSGFVTGEISGPCDSNDIDSGM---IDYDEKNS----EGESGVKSI 330
+K E+K+ ED + GPCDSN + + DE NS + ES
Sbjct: 192 QKTEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDEC 251
Query: 331 TDRLSQVMVSVQSPAQSTADI 393
D L+ ++ V P S ++
Sbjct: 252 QDALN--ILPVPGPTSSATNV 270
>BT009769-1|AAP88771.1| 899|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 899
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 214 DSGFVTGEISGPCDSNDIDSGMIDYDEKNSEGESGVKSITDRLSQVMVSVQSPAQSTADI 393
DSG E S P + + + ++ E + + + R ++ ++ A + A +
Sbjct: 415 DSGEEAAEPSAPSRTPQCEPQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADARALL 474
Query: 394 P-PLYLLFQQDEDGDTQLHXASV 459
+LL QDE+GDT LH A +
Sbjct: 475 AGQRHLLTAQDENGDTPLHLAII 497
>BC063799-1|AAH63799.1| 839|Homo sapiens NBPF10 protein protein.
Length = 839
Score = 29.1 bits (62), Expect = 7.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 172 KKDSETKLREDEYADSGFVTGEISGPCDSNDIDSGM---IDYDEKNS----EGESGVKSI 330
+K E+K+ ED + GPCDSN + + DE NS + ES
Sbjct: 192 QKTEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDEC 251
Query: 331 TDRLSQVMVSVQSPAQSTADI 393
D L+ ++ V P S ++
Sbjct: 252 QDALN--ILPVPGPTSSATNV 270
>BC002844-1|AAH02844.1| 899|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 899
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 214 DSGFVTGEISGPCDSNDIDSGMIDYDEKNSEGESGVKSITDRLSQVMVSVQSPAQSTADI 393
DSG E S P + + + ++ E + + + R ++ ++ A + A +
Sbjct: 415 DSGEEAAEPSAPSRTPQCEPQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADARALL 474
Query: 394 P-PLYLLFQQDEDGDTQLHXASV 459
+LL QDE+GDT LH A +
Sbjct: 475 AGQRHLLTAQDENGDTPLHLAII 497
>AY894574-1|AAX85113.1| 942|Homo sapiens NBPF9 isoform 2 protein.
Length = 942
Score = 29.1 bits (62), Expect = 7.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 172 KKDSETKLREDEYADSGFVTGEISGPCDSNDIDSGM---IDYDEKNS----EGESGVKSI 330
+K E+K+ ED + GPCDSN + + DE NS + ES
Sbjct: 192 QKAEESKVTEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDEC 251
Query: 331 TDRLSQVMVSVQSPAQSTADI 393
D L+ ++ V P S ++
Sbjct: 252 QDALN--ILPVPGPTSSATNV 270
>AY865619-1|AAW56071.1| 900|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 900
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 214 DSGFVTGEISGPCDSNDIDSGMIDYDEKNSEGESGVKSITDRLSQVMVSVQSPAQSTADI 393
DSG E S P + + + ++ E + + + R ++ ++ A + A +
Sbjct: 415 DSGEEAAEPSAPSRTPQCEPQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADARALL 474
Query: 394 P-PLYLLFQQDEDGDTQLHXASV 459
+LL QDE+GDT LH A +
Sbjct: 475 AGQRHLLTAQDENGDTPLHLAII 497
>AL121928-1|CAC08399.1| 900|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells 2 (p49/p100)
protein.
Length = 900
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 214 DSGFVTGEISGPCDSNDIDSGMIDYDEKNSEGESGVKSITDRLSQVMVSVQSPAQSTADI 393
DSG E S P + + + ++ E + + + R ++ ++ A + A +
Sbjct: 415 DSGEEAAEPSAPSRTPQCEPQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADARALL 474
Query: 394 P-PLYLLFQQDEDGDTQLHXASV 459
+LL QDE+GDT LH A +
Sbjct: 475 AGQRHLLTAQDENGDTPLHLAII 497
>AK000726-1|BAA91343.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ20719 fis, clone HEP17004. ).
Length = 766
Score = 29.1 bits (62), Expect = 7.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 172 KKDSETKLREDEYADSGFVTGEISGPCDSNDIDSGM---IDYDEKNS----EGESGVKSI 330
+K E+K+ ED + GPCDSN + + DE NS + ES
Sbjct: 117 QKTEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDEC 176
Query: 331 TDRLSQVMVSVQSPAQSTADI 393
D L+ ++ V P S ++
Sbjct: 177 QDALN--ILPVPGPTSSATNV 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,585,490
Number of Sequences: 237096
Number of extensions: 975698
Number of successful extensions: 2663
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2663
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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