Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12c17f
         (461 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   0.69 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   0.92 
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   3.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   4.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 286 YDEKNSEGESGV--KSITDRLSQVMVSV 363
           Y  +   G SGV  K + DR+S +M+SV
Sbjct: 620 YPGEEMGGSSGVLAKKVADRVSMLMISV 647


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 299 IVKVKVE*NPLRIGCHK*WLVFRVLHRVPQTFLRCIYCSNRTRTETHNYTSPPY 460
           +V +K   N +    H+    F V  RVP T     + S  T   T  Y+S PY
Sbjct: 171 VVNLKSGSNTIERNSHE--SXFVVPTRVPATCCTTXWWSXXTVAXTFKYSSKPY 222


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 138 FSILTIILSFHYCL 97
           FS+LTI++S+ Y L
Sbjct: 88  FSVLTILISYIYIL 101


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 310 ESGVKSITDRLSQVMVSVQSPAQSTADIPPLYL 408
           +SG+  + DR S+ +   +   +   DIPP YL
Sbjct: 5   KSGILYLFDRPSEPVYVPKGDNKVAFDIPPDYL 37


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +2

Query: 299 IVKVKVE*NPLRIGCHK*WLVFRVLHRVPQTFLRCIYCSNRTRTETHNYTSPPY 460
           +V +K   N +    H+   VF V   VP   L      +   +ET  Y+S PY
Sbjct: 545 VVNLKSGSNTIERNSHE--SVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQPY 596


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +2

Query: 299 IVKVKVE*NPLRIGCHK*WLVFRVLHRVPQTFLRCIYCSNRTRTETHNYTSPPY 460
           +V +K   N +    H+   VF V   VP   L      +   +ET  Y+S PY
Sbjct: 545 VVNLKSGSNTIERNSHE--SVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQPY 596


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 292 EKNSEGESGVKSITDRLSQVMVS 360
           + NS+G   +K I D+LS  + S
Sbjct: 40  DSNSDGIGDLKGIKDKLSHFIES 62


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 295 KNSEGESGVKSITDRLSQVMVS 360
           +NS  ++GV +I DR+   +VS
Sbjct: 300 RNSAQQAGVGTIFDRVLSELVS 321


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 295 KNSEGESGVKSITDRLSQVMVS 360
           +NS  ++GV +I DR+   +VS
Sbjct: 300 RNSAQQAGVGTIFDRVLSELVS 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,250
Number of Sequences: 438
Number of extensions: 2102
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)