Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12c12f
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    27   0.45 
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       24   4.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   4.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   7.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   9.6  

>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 27.1 bits (57), Expect = 0.45
 Identities = 19/81 (23%), Positives = 33/81 (40%)
 Frame = +3

Query: 75  VAAVPYGDVDLAESQRIVDGIIENWISRAQLRLSPFDPIVNNEYAGGWHLPGGENILKVR 254
           +  +  G V + +S  I+  +++ +    Q  L P DPI   +   G H   G    ++R
Sbjct: 58  IPVIDDGGVIVRDSHAIIIYLVQKYGKDGQT-LYPEDPIARAKVNAGLHFDSGVLFSRLR 116

Query: 255 GSVEGVNAAGFSTFELDSISY 317
              E +   G +    D I Y
Sbjct: 117 FYFEPILYEGSAEVPQDKIDY 137


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 421 VSLRSKIWTSPSAASIEA-ATEFKLKDK*S*PVNKL 317
           VSL  K+WT P      A + E++L D  +  +N L
Sbjct: 123 VSLMKKLWTDPGVQQCFARSREYQLNDSAAYYLNSL 158


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 150 ISRAQLRLSPFDPIVNNEYAGGW 218
           IS  Q  L P   I+ N Y  GW
Sbjct: 384 ISTEQKELIPIPEIIPNRYHAGW 406


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 575 PEQVQLDFRVDFSNRQLKFDVPDG 504
           P Q++   R  F+NR+L +D  DG
Sbjct: 599 PRQLRNILRDYFANRELVYDTADG 622


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -2

Query: 268  PSTEPRTFRMFSPPGRCQPPAYSL-FTIGSNGDKRNWALEIQFSIMPSTMRWDSAR 104
            P T P +F   S PGR   P  ++  T+G NG      L+ + S     ++++SAR
Sbjct: 1208 PGTAPNSFHK-SSPGRGSWPGPAVENTLGHNG-----LLDAEHSKSEQLLKYNSAR 1257


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 174 SPFDPIVNNEYAGGWHLPGGEN 239
           SP +   NN   GG +LPG  N
Sbjct: 374 SPVNGYGNNHPTGGSNLPGNNN 395


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 445  AIPPEASAVSLRSKIWTSPSAASIEAATEFK 353
            +IP  + +VSL++ + T P      ++ EFK
Sbjct: 3105 SIPHLSHSVSLQASVKTQPPRLRFVSSVEFK 3135


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 231 GENILKVRGSVEGVNAAGFSTFELDSISYNLFTG 332
           G ++  ++ SV    A G S   LDS+S N   G
Sbjct: 487 GVDVEALKNSVATAVAVGGSARSLDSLSSNTIAG 520


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,574
Number of Sequences: 2352
Number of extensions: 8818
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)