Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c09r
(771 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens ... 37 0.070
AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protei... 37 0.070
Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finge... 34 0.65
BC117387-1|AAI17388.1| 935|Homo sapiens BRPF3 protein protein. 34 0.65
BC033652-1|AAH33652.2| 602|Homo sapiens BRPF3 protein protein. 34 0.65
AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein. 34 0.65
>AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens
cDNA FLJ40114 fis, clone TESTI2008762. ).
Length = 691
Score = 37.1 bits (82), Expect = 0.070
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = -2
Query: 743 PXDSVSXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADL 564
P D + D +D+DV DS + + D +D++ P DS D+ +AP + +D
Sbjct: 215 PDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDS---SDDSEAPDDSSDD 271
Query: 563 QVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQ-PEDLE 387
AP + D+ + +++ +DSE S + A D+ + V D ++ P+D
Sbjct: 272 SEAPDDSSDD--SEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNS 329
Query: 386 KAQLVDLPVENV 351
V +P E++
Sbjct: 330 DDLEVPVPAEDL 341
Score = 35.1 bits (77), Expect = 0.28
Identities = 33/129 (25%), Positives = 62/129 (48%)
Frame = -2
Query: 719 ETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIV 540
++ D +D+DV D + D D +D+DVP DS D+ +AP + +D AP +
Sbjct: 203 DSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDS---SDDSEAPDDSSDDSEAPDDSS 259
Query: 539 DEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPV 360
D+ + ++ +DSE S + A D + D +++ D +K+ D+P
Sbjct: 260 DD--SEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPD-DKSDDSDVP- 315
Query: 359 ENVAEPEDL 333
E+ ++ D+
Sbjct: 316 EDKSDDSDV 324
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = -2
Query: 743 PXDSVSXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADL 564
P DS E D +D++ DS + + D +D+DVP D D D +D ++
Sbjct: 275 PDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEV 334
Query: 563 QVAPVNIVDEPVEKTNEE 510
V ++ +E ++EE
Sbjct: 335 PVPAEDLCNEGQIASDEE 352
Score = 32.7 bits (71), Expect = 1.5
Identities = 33/150 (22%), Positives = 62/150 (41%)
Frame = -2
Query: 710 DAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVDEP 531
D P +++D +D N D+ D +D+DVP D D+ D P + +D P + D+
Sbjct: 187 DVPDDNSDDSSDD-NSDDSSDDNSDDSDVPDDK---SDDSDVPDDSSDDSDVPDDSSDDS 242
Query: 530 VEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENV 351
+ ++++ S E P + +D EA + + ++ D ++
Sbjct: 243 EAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDS 302
Query: 350 AEPEDLSPVQVVNPIVENSQSEYPGKRYPD 261
P+D S V P ++ S+ P D
Sbjct: 303 EAPDDKSDDSDV-PEDKSDDSDVPDDNSDD 331
>AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protein
protein.
Length = 691
Score = 37.1 bits (82), Expect = 0.070
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = -2
Query: 743 PXDSVSXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADL 564
P D + D +D+DV DS + + D +D++ P DS D+ +AP + +D
Sbjct: 215 PDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDS---SDDSEAPDDSSDD 271
Query: 563 QVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQ-PEDLE 387
AP + D+ + +++ +DSE S + A D+ + V D ++ P+D
Sbjct: 272 SEAPDDSSDD--SEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNS 329
Query: 386 KAQLVDLPVENV 351
V +P E++
Sbjct: 330 DDLEVPVPAEDL 341
Score = 35.1 bits (77), Expect = 0.28
Identities = 33/129 (25%), Positives = 62/129 (48%)
Frame = -2
Query: 719 ETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIV 540
++ D +D+DV D + D D +D+DVP DS D+ +AP + +D AP +
Sbjct: 203 DSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDS---SDDSEAPDDSSDDSEAPDDSS 259
Query: 539 DEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPV 360
D+ + ++ +DSE S + A D + D +++ D +K+ D+P
Sbjct: 260 DD--SEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPD-DKSDDSDVP- 315
Query: 359 ENVAEPEDL 333
E+ ++ D+
Sbjct: 316 EDKSDDSDV 324
Score = 33.5 bits (73), Expect = 0.86
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = -2
Query: 743 PXDSVSXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADL 564
P DS E D +D++ DS + + D +D+DVP D D D +D ++
Sbjct: 275 PDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEV 334
Query: 563 QVAPVNIVDEPVEKTNEE 510
V ++ +E ++EE
Sbjct: 335 PVPAEDLCNEGQIASDEE 352
Score = 32.7 bits (71), Expect = 1.5
Identities = 33/150 (22%), Positives = 62/150 (41%)
Frame = -2
Query: 710 DAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVDEP 531
D P +++D +D N D+ D +D+DVP D D+ D P + +D P + D+
Sbjct: 187 DVPDDNSDDSSDD-NSDDSSDDNSDDSDVPDDK---SDDSDVPDDSSDDSDVPDDSSDDS 242
Query: 530 VEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENV 351
+ ++++ S E P + +D EA + + ++ D ++
Sbjct: 243 EAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDS 302
Query: 350 AEPEDLSPVQVVNPIVENSQSEYPGKRYPD 261
P+D S V P ++ S+ P D
Sbjct: 303 EAPDDKSDDSDV-PEDKSDDSDVPDDNSDD 331
>Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finger
containing, 3 protein.
Length = 1205
Score = 33.9 bits (74), Expect = 0.65
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 647 APGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVE 468
A G +P S VD+ P E L A +++P E + E+E D + ++W++
Sbjct: 107 ASGTSFHLPQPSFRMVDSGIQP-EAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLD 165
Query: 467 YPAELDE-DGNGLVIVDLPIEAQPEDLEKAQLVD 369
E DG+ LV D E + LEK ++
Sbjct: 166 MVNEKRRVDGHSLVSAD-TFELLVDRLEKESYLE 198
>BC117387-1|AAI17388.1| 935|Homo sapiens BRPF3 protein protein.
Length = 935
Score = 33.9 bits (74), Expect = 0.65
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 647 APGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVE 468
A G +P S VD+ P E L A +++P E + E+E D + ++W++
Sbjct: 107 ASGTSFHLPQPSFRMVDSGIQP-EAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLD 165
Query: 467 YPAELDE-DGNGLVIVDLPIEAQPEDLEKAQLVD 369
E DG+ LV D E + LEK ++
Sbjct: 166 MVNEKRRVDGHSLVSAD-TFELLVDRLEKESYLE 198
>BC033652-1|AAH33652.2| 602|Homo sapiens BRPF3 protein protein.
Length = 602
Score = 33.9 bits (74), Expect = 0.65
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 647 APGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVE 468
A G +P S VD+ P E L A +++P E + E+E D + ++W++
Sbjct: 83 ASGTSFHLPQPSFRMVDSGIQP-EAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLD 141
Query: 467 YPAELDE-DGNGLVIVDLPIEAQPEDLEKAQLVD 369
E DG+ LV D E + LEK ++
Sbjct: 142 MVNEKRRVDGHSLVSAD-TFELLVDRLEKESYLE 174
>AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein.
Length = 1214
Score = 33.9 bits (74), Expect = 0.65
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = -2
Query: 647 APGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVE 468
A G +P S VD+ P E L A +++P E + E+E D + ++W++
Sbjct: 116 ASGTSFHLPQPSFRMVDSGIQP-EAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLD 174
Query: 467 YPAELDE-DGNGLVIVDLPIEAQPEDLEKAQLVD 369
E DG+ LV D E + LEK ++
Sbjct: 175 MVNEKRRVDGHSLVSAD-TFELLVDRLEKESYLE 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,006,071
Number of Sequences: 237096
Number of extensions: 1833328
Number of successful extensions: 5009
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4979
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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