Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c09r
(771 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1) domain... 39 0.003
At3g59370.1 68416.m06621 expressed protein hypothetical protein ... 35 0.068
At2g22080.1 68415.m02622 expressed protein 33 0.16
At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related... 33 0.28
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 32 0.48
At3g55700.1 68416.m06188 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.84
At3g54760.1 68416.m06059 dentin sialophosphoprotein-related cont... 31 0.84
At5g31412.1 68418.m03722 hypothetical protein contains Pfam doma... 31 1.1
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 31 1.1
At1g58025.1 68414.m06576 DNA-binding bromodomain-containing prot... 30 1.5
At4g21450.2 68417.m03102 vesicle-associated membrane family prot... 30 1.9
At4g21450.1 68417.m03103 vesicle-associated membrane family prot... 30 1.9
At1g44090.1 68414.m05093 gibberellin 20-oxidase family protein s... 30 1.9
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 2.6
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 29 2.6
At1g64790.1 68414.m07346 translational activator family protein ... 29 3.4
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 29 3.4
At5g66320.2 68418.m08362 zinc finger (GATA type) family protein 29 4.5
At5g66320.1 68418.m08361 zinc finger (GATA type) family protein 29 4.5
At5g45830.1 68418.m05637 expressed protein low similarity to tum... 29 4.5
At5g42490.1 68418.m05172 kinesin motor family protein contains P... 29 4.5
At3g62900.1 68416.m07066 expressed protein ; expression supporte... 29 4.5
At3g57660.1 68416.m06424 DNA-directed RNA polymerase family prot... 29 4.5
At5g10560.1 68418.m01222 glycosyl hydrolase family 3 protein bet... 28 7.9
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 28 7.9
At3g18420.1 68416.m02342 tetratricopeptide repeat (TPR)-containi... 28 7.9
At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family... 28 7.9
>At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein contains Pfam profiles PF00564:
PB1 domain, PF00515: TPR Domain
Length = 809
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 737 DSVSXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVD---APVEDAD 567
D VS VETLD V A+ LAD V+ V+ +D D VS V+N+D VE D
Sbjct: 41 DCVSKVETLDDCVSKAETLADCVSKVETLDDCVSKVKTLDDCVSKVENLDDCVPKVETLD 100
Query: 566 LQVAPVNIVDEPVEK 522
V V +D+ V +
Sbjct: 101 DCVPKVETLDDCVSE 115
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2
Query: 737 DSVSXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDAD 567
D VS VETLD V L D V+ V+N+D + D V V+ +D V + +
Sbjct: 61 DCVSKVETLDDCVSKVKTLDDCVSKVENLDDCVPKVETLDDCVPKVETLDDCVSEVE 117
>At3g59370.1 68416.m06621 expressed protein hypothetical protein
F12F1.4 - Arabidopsis thaliana, EMBL:AC002131
Length = 95
Score = 34.7 bits (76), Expect = 0.068
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = -2
Query: 611 VSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGL 432
V V +V + + ++ P + E EKTNE+ E + V E P ++E+
Sbjct: 6 VEHVTSVAVEIVETEVNQHPEEVFVEDAEKTNEDEEEKAAV----ITETPTVVEEEKKAE 61
Query: 431 VIVDLPIEAQPEDLEKAQLVDLPVENVA 348
+ + P E + E LE+ Q E VA
Sbjct: 62 EVTETPEEKKTEALEEKQTEVAAAEEVA 89
>At2g22080.1 68415.m02622 expressed protein
Length = 177
Score = 33.5 bits (73), Expect = 0.16
Identities = 28/112 (25%), Positives = 44/112 (39%)
Frame = -2
Query: 719 ETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIV 540
+ ++ E D + + N D+ D GED + AD + PV D DL +
Sbjct: 50 DVIENGYEVVDAVEGNGNNDDSGDDGGEDEEGSADDAEGKETKKGPVSDPDLNGEAGDND 109
Query: 539 DEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEK 384
DEP + E+D + E E + D G D E + E+ E+
Sbjct: 110 DEPEGDDGNDDEDDDNHENDDEDEEEDEDENDDGGEEDDDEDAEVEEEEEEE 161
>At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 572
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 581 VEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPI 411
VE+ L + + + E N++ + S +SWVE P + + + I DLPI
Sbjct: 277 VEELKLNINKLRFSAKLAEAANDDYSSSSSSSIVSWVEIPISMSINIGEISIPDLPI 333
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 506 ENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLS 330
E DS V S A+++ G+V+V EA ++ +K VD + N+ EP+DL+
Sbjct: 462 EGDSMVDSSVVDSVDADINVAEPGVVVVGAAKEAVIKEDDKDDEVDKTISNIEEPDDLT 520
>At3g55700.1 68416.m06188 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glucuronosyl transferase homolog,
Lycopersicon esculentum, PIR:S39507 ;contains Pfam
profile: PF00201 UDP-glucoronosyl and UDP-glucosyl
transferase
Length = 460
Score = 31.1 bits (67), Expect = 0.84
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -2
Query: 488 GSISWVEYPA-ELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVN 312
G+ S+ + A L D L I D ++ +L ++ DLPV EPE+L +VVN
Sbjct: 141 GASSFCAFAAFPLLRDKGYLPIQDSRLDEPVTELPPLKVKDLPVMETNEPEEL--YRVVN 198
Query: 311 PIVENSQS 288
+VE ++S
Sbjct: 199 DMVEGAKS 206
>At3g54760.1 68416.m06059 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor (Dentin phosphophoryn DPP,
Dentin sialoprotein DSP) [Homo sapiens]
Length = 792
Score = 31.1 bits (67), Expect = 0.84
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Frame = -2
Query: 728 SXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPV 549
S V+T D P+ +AD +V +D ++AD+ +D +++ D+ + ++ + A
Sbjct: 262 SMVQTQDVPIAEADNNESNVVKKMEIDERKDNADMTSDLTGTIESADSAIPNSPTEDAAP 321
Query: 548 NIVDEPVEKT-----NEEIENDSEVGSI-SWVEYPAEL-DEDGNGLVIVDLPIEAQPEDL 390
V EP++ +I N + + SW +L E GN + D + ED+
Sbjct: 322 GEV-EPLDHNALFDPTSDITNFIDFSGVSSWSGNIQDLKTETGNVSLKEDKKVTDMAEDV 380
Query: 389 EKAQL 375
A +
Sbjct: 381 VTADI 385
>At5g31412.1 68418.m03722 hypothetical protein contains Pfam domain,
PF04937: Protein of unknown function (DUF 659)
Length = 433
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 470 EYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQV 318
E P+E DE+ NG + P E EDLE + D+ ++ E ++ V V
Sbjct: 375 EGPSERDEEPNGEPVYQTPNEKPREDLESHEEHDITIDIEFESDNEQVVNV 425
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = -2
Query: 608 SFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLV 429
SF+ ++ +++A Q V E EK EE E + S+ E PAE D
Sbjct: 305 SFLATMEDYIKEAP-QSGSVQKKLEYQEKEEEEQEEEEAEHSVQ-PEEPAEADNQKENSE 362
Query: 428 IVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNP 309
IE + ED EK + D + + +DL + +NP
Sbjct: 363 GDQPLIEEEEEDQEKIEEEDAKPSFLIDTDDLLGLNEINP 402
>At1g58025.1 68414.m06576 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487; contains
prenyl group binding site (CAAX box) Prosite:PS00294
Length = 769
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 647 APGEDADVPADSVSFVDNVDAPVEDA-DLQVAPVNIVDEPVEKTNEEIENDSEVGSISWV 471
+P V SV+ +++D V+ + + + +D PV KT IEN EV V
Sbjct: 378 SPAGSPSVDNSSVNMGEDMDIDVDKKPEQEKTEIVELDSPVSKTQRVIENKQEVEEEENV 437
Query: 470 EYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAE 345
E +E N + D + Q D + D PV + AE
Sbjct: 438 EVESENKTKAN---VED---KTQSIDRSMEETGDEPVNSAAE 473
>At4g21450.2 68417.m03102 vesicle-associated membrane family protein
/ VAMP family protein similar to VAP27 GI:6688926
[Nicotiana plumbaginifolia]
Length = 212
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 385 FSKSSGCASIGRSTITSPFPSSSNSAGYSTQL 480
F SSG + S TSPFPS ++S+ S+ L
Sbjct: 23 FRNSSGHRNAASSAATSPFPSGASSSSTSSHL 54
>At4g21450.1 68417.m03103 vesicle-associated membrane family protein
/ VAMP family protein similar to VAP27 GI:6688926
[Nicotiana plumbaginifolia]
Length = 295
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 385 FSKSSGCASIGRSTITSPFPSSSNSAGYSTQL 480
F SSG + S TSPFPS ++S+ S+ L
Sbjct: 23 FRNSSGHRNAASSAATSPFPSGASSSSTSSHL 54
>At1g44090.1 68414.m05093 gibberellin 20-oxidase family protein
similar to gibberellin 20-oxidase GI:4164141 from
[Lactuca sativa]; contains Pfam domain PF03171
2OG-Fe(II) oxygenase superfamily
Length = 385
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 323 QVVNPIVENSQSEYPGKRYPDATWR*IIYFS-SFYLN*NIYIHNFS 189
+++ P E + E ++YPD TW + F+ S Y N +HNFS
Sbjct: 328 KIIVPPPELVEGEEASRKYPDFTWAQLQKFTQSGYRVDNTTLHNFS 373
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 641 GEDADVPADSVSFVDNVDAPVEDADLQVAPV 549
GED DV A + SF + D+P + A + APV
Sbjct: 11 GEDKDVEAGTSSFTEYEDSPFDIASTKNAPV 41
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 337 SSGSATFSTGRSTSW--AFSKSSGCASIGRSTITSPFPSSSNSAGYSTQL 480
SS S +TG S S+ A S S SI +T +SPF SS+SAG + L
Sbjct: 243 SSSSIFGATGSSPSFSVASSASGSSPSIFGATGSSPFFGSSSSAGSTPSL 292
>At1g64790.1 68414.m07346 translational activator family protein
similar to HsGCN1 [Homo sapiens] GI:2282576
Length = 2440
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -3
Query: 547 TSWMNQLKRRMRKSRMTVKLARSAGLNILLNWTKMETDLLLLIYLLRHNPKI*RKPSLLT 368
TS + L + + ++++V L L+ NW +L + LL+HNP SL +
Sbjct: 2224 TSMLGVLSQYLEAAQLSVLLQEVNDLSASQNWGARHGSVLCISSLLKHNPSTIMTSSLFS 2283
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/99 (26%), Positives = 44/99 (44%)
Frame = -2
Query: 593 VDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLP 414
+D P +D Q+A + P K EE+++D + WV EL VI +
Sbjct: 162 LDDPFDDPP-QLAEMMPDASPEGKPKEEVKDDVRLED-DWVPMDEELGAQELEEVIREKA 219
Query: 413 IEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVEN 297
+ LE + D+P V P+++ V +NP+ E+
Sbjct: 220 AHSSAVVLES--IGDIPEAEVKPPDNVLFVCKLNPVTED 256
>At5g66320.2 68418.m08362 zinc finger (GATA type) family protein
Length = 339
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 710 DAPVEDADVLADSVNFV---DNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIV 540
+ P +D D L S +F D P + +PAD ++ ++ + VED+ + + N+
Sbjct: 74 EEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEYSGPNLT 133
Query: 539 DEPVEK 522
P EK
Sbjct: 134 GTPTEK 139
>At5g66320.1 68418.m08361 zinc finger (GATA type) family protein
Length = 339
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 710 DAPVEDADVLADSVNFV---DNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIV 540
+ P +D D L S +F D P + +PAD ++ ++ + VED+ + + N+
Sbjct: 74 EEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEYSGPNLT 133
Query: 539 DEPVEK 522
P EK
Sbjct: 134 GTPTEK 139
>At5g45830.1 68418.m05637 expressed protein low similarity to
tumor-related protein [Nicotiana glauca x Nicotiana
langsdorffii] GI:688423
Length = 291
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -2
Query: 572 ADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPED 393
A + V V I+DE + T + + I E++ G V+VD ++ Q E
Sbjct: 147 AKINVLHVKIIDEEEKMTKKVSSLQEDAADIPIATVAYEMENVGEPNVVVDQALDKQEEA 206
Query: 392 LEK--AQLVDLPVENVAEPED-LSPVQ 321
+ + + +L V+ +A+ LSPVQ
Sbjct: 207 MARLLVEADNLRVDTLAKILGILSPVQ 233
>At5g42490.1 68418.m05172 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1087
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = -2
Query: 716 TLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVD 537
T + E+ D+ + +NVD + DV A ++ + ++++DL++ P
Sbjct: 511 TSNEKAENEDMEISTPAEKENVDLSLKTIDVNAKPETY----ELTLKNSDLEIGPSVEAQ 566
Query: 536 EPVEKTNEEIENDSEVGSISWVEYPAE--LDEDGNGLVIVDLPIEAQPEDLEKAQLVDLP 363
E E NEE + +E +S AE L+++ N +++ + E +L LP
Sbjct: 567 ESQESVNEEEQMKNEERKMSPSTKQAEQCLNKEENA--------QSEQQSTEDCELNSLP 618
Query: 362 VENVAE 345
+ N +E
Sbjct: 619 INNQSE 624
>At3g62900.1 68416.m07066 expressed protein ; expression supported by
MPSS
Length = 1401
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Frame = -2
Query: 644 PGEDADVPADSVSFVDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIE------NDSEVGS 483
PGE P+ S S VDNV+ P A +V + P+ N ++ S V
Sbjct: 1300 PGES---PSSSASDVDNVNHPA--AVDRVGTSRGISSPLVAGNHDVNLSMDASRKSRVAL 1354
Query: 482 ISWVEYPAELDEDGNGLVIVDLPIEAQPEDLE 387
+ +E E + G G++ + ++ +D+E
Sbjct: 1355 TACIENSGEAQQQGEGIISIKSALDYNFQDME 1386
>At3g57660.1 68416.m06424 DNA-directed RNA polymerase family protein
similar to SP|O35134 DNA-directed RNA polymerase I
largest subunit (EC 2.7.7.6) (RNA polymerase I 194 kDa
subunit) (RPA194) {Mus musculus}; contains InterPro
accession IPR000722: RNA polymerase, alpha subunit
Length = 1670
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = -2
Query: 548 NIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVD 369
N V P+ E +ND S+S + + D+DG G + DL +AQ + ++ +D
Sbjct: 1315 NDVTGPI--AGNETDNDD---SVSGKQNEDDGDDDGEGTEVDDLGSDAQKQKKQETDEMD 1369
Query: 368 L---PVENVAEPEDLSPVQVVNPIVENSQSEYPGKRYPD 261
+ EP +S V+ EN +E + P+
Sbjct: 1370 YEENSEDETNEPSSISGVEDPEMDSENEDTEVSKEDTPE 1408
>At5g10560.1 68418.m01222 glycosyl hydrolase family 3 protein
beta-xylosidase, Aspergllus nidulans, EMBL:ANXLND
Length = 792
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = -2
Query: 680 ADSVNFVDNVDAPGEDADVPADSVSFVDNV-DAPVEDADLQVAPVNIV---DEPVEKTNE 513
AD V V +D E D S+S D A + PV +V PV+ T
Sbjct: 500 ADFVIVVAGLDLSQETEDKDRVSLSLPGKQKDLVSHVAAVSKKPVILVLTGGGPVDVTFA 559
Query: 512 EIENDSEVGSISWVEYPAE 456
+ ND +GSI W+ YP E
Sbjct: 560 K--NDPRIGSIIWIGYPGE 576
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Frame = -2
Query: 728 SXVETLDAPVEDADVLADSVNFVDNVDAPGEDADVPADSVSFVDNVDAPVEDADLQVAP- 552
S E LD P E D F+D D ++D A+ + + D + P
Sbjct: 565 SKEEDLDVPGEPDSNKEDMQGFIDEHDGANNESDFTANDGLNSSAAEEEILDTGFLIVPY 624
Query: 551 VNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPED----LEK 384
+++ N + +GS+S + + +E VD +E P + + +
Sbjct: 625 AGSTQSHLDRGNIVVGKTVCLGSMSGTVFVTQ-EERPVEEATVDTEMEEVPSNVSARVSE 683
Query: 383 AQLVDLPVENVAEP 342
L+D ++VAEP
Sbjct: 684 VDLLDNGPKDVAEP 697
>At3g18420.1 68416.m02342 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile: PF00515 tetratricopeptide
repeat domain (TPR domain)
Length = 316
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/107 (21%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = -2
Query: 653 VDAPGEDADVPADSVSFVDNVDAPVEDA-DLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 477
V G+ + +P + S V ++ E+ + +++ + + E ++ T E +E S
Sbjct: 69 VSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVETLR-----S 123
Query: 476 WVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPED 336
++ E ED L +++ + AQPE+ E L+ + + PE+
Sbjct: 124 LLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPEN 170
>At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family
protein
Length = 575
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = -2
Query: 533 PVEKT-NEEIENDSEVGSISW-VEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPV 360
PVE+ EE +++E I++ E P + L + P+ + + + P+
Sbjct: 302 PVEEVPKEEALSNTETHQIAYGQEAPLSVFGLVPSLSAIGQPVNTEAAETQPGNSNSPPI 361
Query: 359 ENVAEPEDLSPVQVVNPIVENSQSEYPGKRYPDATWR*IIYFSSFYLN*NIYIHNF 192
V+ P D S + + +YP +P Y+S +Y+ YIH F
Sbjct: 362 SLVSYPPDQSSIAAATQQTNFLRQQYPPNFFPYG------YYSPYYMP-PPYIHQF 410
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,248,333
Number of Sequences: 28952
Number of extensions: 286663
Number of successful extensions: 1034
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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