Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12c04r
         (799 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069863-1|AAL40008.1|  615|Drosophila melanogaster SD10603p pro...    31   2.4  
AE014134-451|AAN10411.1|  615|Drosophila melanogaster CG31689-PD...    31   2.4  
AE014134-450|AAN10410.1|  615|Drosophila melanogaster CG31689-PC...    31   2.4  
AE014134-449|AAN10409.1|  615|Drosophila melanogaster CG31689-PB...    31   2.4  
AE014134-448|AAF51223.1|  615|Drosophila melanogaster CG31689-PA...    31   2.4  
AE014134-2264|AAF53229.2| 1117|Drosophila melanogaster CG17178-P...    29   9.7  

>AY069863-1|AAL40008.1|  615|Drosophila melanogaster SD10603p
           protein.
          Length = 615

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 94  YRVIN*ALLLSAAKKTVLNRMQNVYVLLHNMIIKCGKNKNKA*QIFEIAKGYYG 255
           Y + N   +LSA + T     QN  + L ++ ++C    N A  + E A G YG
Sbjct: 212 YNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYHNPADFLLECANGDYG 265


>AE014134-451|AAN10411.1|  615|Drosophila melanogaster CG31689-PD,
           isoform D protein.
          Length = 615

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 94  YRVIN*ALLLSAAKKTVLNRMQNVYVLLHNMIIKCGKNKNKA*QIFEIAKGYYG 255
           Y + N   +LSA + T     QN  + L ++ ++C    N A  + E A G YG
Sbjct: 212 YNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYHNPADFLLECANGDYG 265


>AE014134-450|AAN10410.1|  615|Drosophila melanogaster CG31689-PC,
           isoform C protein.
          Length = 615

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 94  YRVIN*ALLLSAAKKTVLNRMQNVYVLLHNMIIKCGKNKNKA*QIFEIAKGYYG 255
           Y + N   +LSA + T     QN  + L ++ ++C    N A  + E A G YG
Sbjct: 212 YNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYHNPADFLLECANGDYG 265


>AE014134-449|AAN10409.1|  615|Drosophila melanogaster CG31689-PB,
           isoform B protein.
          Length = 615

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 94  YRVIN*ALLLSAAKKTVLNRMQNVYVLLHNMIIKCGKNKNKA*QIFEIAKGYYG 255
           Y + N   +LSA + T     QN  + L ++ ++C    N A  + E A G YG
Sbjct: 212 YNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYHNPADFLLECANGDYG 265


>AE014134-448|AAF51223.1|  615|Drosophila melanogaster CG31689-PA,
           isoform A protein.
          Length = 615

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 94  YRVIN*ALLLSAAKKTVLNRMQNVYVLLHNMIIKCGKNKNKA*QIFEIAKGYYG 255
           Y + N   +LSA + T     QN  + L ++ ++C    N A  + E A G YG
Sbjct: 212 YNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYHNPADFLLECANGDYG 265


>AE014134-2264|AAF53229.2| 1117|Drosophila melanogaster CG17178-PA
           protein.
          Length = 1117

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
 Frame = +2

Query: 440 VISLCGYYKFFS-SISTRNN--HEAIPFLCYV-----QLNNSLAVREVTYVQ*CLIRSLK 595
           +++L  +YK +  +   RNN  H    F C++     ++ NSL +R   Y+   +I S  
Sbjct: 622 ILALIAWYKKYCWTRYGRNNVPHHYNGFSCFIFRIHDKILNSLPIRICIYLF-LMISSFF 680

Query: 596 ISILHALFEISYAKLKMLHYD 658
           +S     FE++Y + ++ HY+
Sbjct: 681 MSCQREEFEMAYIEERLFHYE 701


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,910,997
Number of Sequences: 53049
Number of extensions: 533785
Number of successful extensions: 794
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)