BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12c02f (524 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC071853-1|AAH71853.1| 356|Homo sapiens GREB1 protein protein. 33 0.81 AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens ... 31 3.3 AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 30 4.3 BC032587-1|AAH32587.1| 442|Homo sapiens tubby like protein 3 pr... 30 5.7 AF045583-1|AAC95431.1| 442|Homo sapiens tubby like protein 3 pr... 30 5.7 AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 29 7.6 Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 10.0 X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 29 10.0 U13616-1|AAA64834.1| 4377|Homo sapiens ankyrin G protein. 29 10.0 AL592430-3|CAI40518.1| 4372|Homo sapiens ankyrin 3, node of Ranv... 29 10.0 AL359377-2|CAI41373.1| 4372|Homo sapiens ankyrin 3, node of Ranv... 29 10.0 AL359267-1|CAH73232.1| 4372|Homo sapiens ankyrin 3, node of Ranv... 29 10.0 AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 29 10.0 >BC071853-1|AAH71853.1| 356|Homo sapiens GREB1 protein protein. Length = 356 Score = 32.7 bits (71), Expect = 0.81 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 290 KCRELKSSALTSVTRPEKLMMSDAPGGLQEPA--*PSRRRGSAALNNSPISLNKFEITMS 117 KC++L + L ++ RP L S PG +PA R G A P+SL + ++ Sbjct: 275 KCQQLAKNNLLALPRPSALGSSACPGRPGDPALLWAKARGGMGAAGLGPLSLLESDVASM 334 Query: 116 RMR 108 R+R Sbjct: 335 RVR 337 >AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens cDNA FLJ35435 fis, clone SMINT2002620. ). Length = 615 Score = 30.7 bits (66), Expect = 3.3 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = -1 Query: 458 AVASATTFSRASPPEAKDLRTRLKMRISP---SAEPTDAETLGTARTKLSRVP 309 A ++F R S DLRT R+ S+ TD++ LG+ RTK R P Sbjct: 259 AFLKKSSFKRKSTSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSP 311 >AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein precursor protein. Length = 1253 Score = 30.3 bits (65), Expect = 4.3 Identities = 23/71 (32%), Positives = 38/71 (53%) Frame = -3 Query: 504 SSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD* 325 SSD +D+D D S S S+D SS S D++++++ S S +S NS D Sbjct: 710 SSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDS--SDSSNSSDS 767 Query: 324 VESGADVADTT 292 +S +D +D++ Sbjct: 768 SDS-SDSSDSS 777 Score = 29.5 bits (63), Expect = 7.6 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Frame = -3 Query: 519 ANSYCSSDVTDND-----VVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD* 355 +NS SSD +D+D + D S S S+D SS S D+++++D S S +D Sbjct: 558 SNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDS-SDS 616 Query: 354 C*NSGNSQD*VESGADVADT 295 +S + D +S +D +D+ Sbjct: 617 SDSSDSKSDSSKSESDSSDS 636 >BC032587-1|AAH32587.1| 442|Homo sapiens tubby like protein 3 protein. Length = 442 Score = 29.9 bits (64), Expect = 5.7 Identities = 19/78 (24%), Positives = 33/78 (42%) Frame = +1 Query: 76 HRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASDIINFSGRVT 255 H+ + ++P + D ++S N E L + A W+ S ++NF GRVT Sbjct: 332 HKQIPYQPQNNH--DSLLSRWQNRTMENL-----VELHNKAPVWNSDTQSYVLNFRGRVT 384 Query: 256 DVKADDFSSLHLRRVSYV 309 +F +H Y+ Sbjct: 385 QASVKNFQIVHKNDPDYI 402 >AF045583-1|AAC95431.1| 442|Homo sapiens tubby like protein 3 protein. Length = 442 Score = 29.9 bits (64), Expect = 5.7 Identities = 19/78 (24%), Positives = 33/78 (42%) Frame = +1 Query: 76 HRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASDIINFSGRVT 255 H+ + ++P + D ++S N E L + A W+ S ++NF GRVT Sbjct: 332 HKQIPYQPQNNH--DSLLSRWQNRTMENL-----VELHNKAPVWNSDTQSYVLNFRGRVT 384 Query: 256 DVKADDFSSLHLRRVSYV 309 +F +H Y+ Sbjct: 385 QASVKNFQLVHKNDPDYI 402 >AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. Length = 788 Score = 29.5 bits (63), Expect = 7.6 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Frame = -3 Query: 519 ANSYCSSDVTDND-----VVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD* 355 +NS SSD +D+D + D S S S+D SS S D+++++D S S +D Sbjct: 96 SNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDS-SDS 154 Query: 354 C*NSGNSQD*VESGADVADT 295 +S + D +S +D +D+ Sbjct: 155 SDSSDSKSDSSKSESDSSDS 174 Score = 29.1 bits (62), Expect = 10.0 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Frame = -3 Query: 504 SSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD* 325 SSD +D+D D S S S+D SS S ++++++D S S NS +S D Sbjct: 242 SSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSS-----NSSDSSDS 296 Query: 324 VES--GADVADTT 292 +S +D +D++ Sbjct: 297 SDSSNSSDSSDSS 309 >Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. Length = 3570 Score = 29.1 bits (62), Expect = 10.0 Identities = 25/80 (31%), Positives = 36/80 (45%) Frame = -1 Query: 488 TMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVP 309 T +L+ T A +A+T S A+P K+ SP+ PT + T+ + R Sbjct: 2864 TWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSS-PRTA 2922 Query: 308 T*LTRRKCRELKSSALTSVT 249 T L KS+A TSVT Sbjct: 2923 TTLPVLTSTATKSTA-TSVT 2941 >X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. Length = 622 Score = 29.1 bits (62), Expect = 10.0 Identities = 25/80 (31%), Positives = 36/80 (45%) Frame = -1 Query: 488 TMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVP 309 T +L+ T A +A+T S A+P K+ SP+ PT + T+ + R Sbjct: 78 TWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSS-PRTA 136 Query: 308 T*LTRRKCRELKSSALTSVT 249 T L KS+A TSVT Sbjct: 137 TTLPVLTTTATKSTA-TSVT 155 >U13616-1|AAA64834.1| 4377|Homo sapiens ankyrin G protein. Length = 4377 Score = 29.1 bits (62), Expect = 10.0 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = -1 Query: 476 SARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LT 297 S+ E A+AT S+ P LRT +KM IS S E G K+ V T Sbjct: 3698 SSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDKIEAVMT--- 3750 Query: 296 RRKCRELKSSALTSVTRPEKLMMSDAP 216 C+ L++ +T ++ M P Sbjct: 3751 --SCQGLENETITMISNTANSQMGVRP 3775 >AL592430-3|CAI40518.1| 4372|Homo sapiens ankyrin 3, node of Ranvier (ankyrin G) protein. Length = 4372 Score = 29.1 bits (62), Expect = 10.0 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = -1 Query: 476 SARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LT 297 S+ E A+AT S+ P LRT +KM IS S E G K+ V T Sbjct: 3693 SSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDKIEAVMT--- 3745 Query: 296 RRKCRELKSSALTSVTRPEKLMMSDAP 216 C+ L++ +T ++ M P Sbjct: 3746 --SCQGLENETITMISNTANSQMGVRP 3770 >AL359377-2|CAI41373.1| 4372|Homo sapiens ankyrin 3, node of Ranvier (ankyrin G) protein. Length = 4372 Score = 29.1 bits (62), Expect = 10.0 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = -1 Query: 476 SARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LT 297 S+ E A+AT S+ P LRT +KM IS S E G K+ V T Sbjct: 3693 SSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDKIEAVMT--- 3745 Query: 296 RRKCRELKSSALTSVTRPEKLMMSDAP 216 C+ L++ +T ++ M P Sbjct: 3746 --SCQGLENETITMISNTANSQMGVRP 3770 >AL359267-1|CAH73232.1| 4372|Homo sapiens ankyrin 3, node of Ranvier (ankyrin G) protein. Length = 4372 Score = 29.1 bits (62), Expect = 10.0 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = -1 Query: 476 SARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LT 297 S+ E A+AT S+ P LRT +KM IS S E G K+ V T Sbjct: 3693 SSGSLEKSAAATNTSKVDPK----LRTPIKMGISASTMTMKKEGPGEITDKIEAVMT--- 3745 Query: 296 RRKCRELKSSALTSVTRPEKLMMSDAP 216 C+ L++ +T ++ M P Sbjct: 3746 --SCQGLENETITMISNTANSQMGVRP 3770 >AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B protein. Length = 716 Score = 29.1 bits (62), Expect = 10.0 Identities = 25/80 (31%), Positives = 36/80 (45%) Frame = -1 Query: 488 TMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVP 309 T +L+ T A +A+T S A+P K+ SP+ PT + T+ + R Sbjct: 338 TWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSS-PRTA 396 Query: 308 T*LTRRKCRELKSSALTSVT 249 T L KS+A TSVT Sbjct: 397 TTLPVLTSTATKSTA-TSVT 415 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 66,639,291 Number of Sequences: 237096 Number of extensions: 1299451 Number of successful extensions: 3244 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3244 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 5046825278 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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