Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12c01f
(563 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 26 0.23
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 26 0.23
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 26 0.30
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.70
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.70
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 0.70
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 24 1.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.9
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 8.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.6
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.6
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 26.2 bits (55), Expect = 0.23
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 417 LPEVVILPTPVFPENRRS*TRGAPQPCPPRSRQARNCWYPYHPGSR 554
LP ++++ P + + G R ++ + C+YPYHP ++
Sbjct: 353 LPRLLVMRRPQYKFETNRYSSGRVLMRTVRGKE-KTCYYPYHPSTQ 397
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 26.2 bits (55), Expect = 0.23
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 417 LPEVVILPTPVFPENRRS*TRGAPQPCPPRSRQARNCWYPYHPGSR 554
LP ++++ P + + G R ++ + C+YPYHP ++
Sbjct: 353 LPRLLVMRRPQYKFETNRYSSGRVLMRTVRGKE-KTCYYPYHPSTQ 397
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.8 bits (54), Expect = 0.30
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -1
Query: 329 SAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRD 189
S I+AG+++ NN +N + N + +G+G G + + +N D
Sbjct: 226 STITAGNANTNASNNNNNNNNNNNNNNGANDNGNG-NGASNNNNNGD 271
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.70
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 434 NNNFGQRLFGNVLNINGI 381
NNN+ ++L+ N++NI I
Sbjct: 105 NNNYNKKLYYNIINIEQI 122
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.70
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 434 NNNFGQRLFGNVLNINGI 381
NNN+ ++L+ N++NI I
Sbjct: 105 NNNYNKKLYYNIINIEQI 122
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 0.70
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 434 NNNFGQRLFGNVLNINGI 381
NNN+ ++L+ N++NI I
Sbjct: 325 NNNYNKKLYYNIINIEQI 342
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.8 bits (49), Expect = 1.2
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 354 VNRPSEIAADPVDVEDI-AEEPLPEVVILPTPVFPENRRS*TRGA--PQPCPPRSRQARN 524
+ R +E+ A+P + + +P P L PE R PQP PP R R
Sbjct: 87 LRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRRE 146
Query: 525 CWYPYHPGS 551
PG+
Sbjct: 147 AELEAEPGN 155
Score = 23.0 bits (47), Expect = 2.1
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +3
Query: 354 VNRPSEIAADPVDVEDI-AEEPLPEVVILPTPVFPENRRS*TRGA--PQPCPPRSRQARN 524
+ R +E+ A+P + + +P P L PE R PQP PP R R
Sbjct: 143 LRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRRE 202
Query: 525 CWYPYHPGS 551
PG+
Sbjct: 203 AEPEAEPGN 211
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 486 PQPCPPRSRQARNCWYPYHPGS 551
PQP PP R R PG+
Sbjct: 78 PQPRPPHPRLRREAELEAEPGN 99
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 334 RGVPSAPVTVTGAPSTMAGP 275
R VPSA + V P AGP
Sbjct: 990 RSVPSAELIVRTEPQRPAGP 1009
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 334 RGVPSAPVTVTGAPSTMAGP 275
R VPSA + V P AGP
Sbjct: 986 RSVPSAELIVRTEPQRPAGP 1005
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 486 PQPCPPRSRQARNCWYPYHPGS 551
PQP PP R R PG+
Sbjct: 79 PQPRPPHPRLRREAESEAEPGN 100
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 98 YNNYNNNYNTNYKKLQYYNIINIEQI 123
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 458 FRKYGSGENNNFGQRLFGNVLNINGI 381
+ Y + N N+ + + N++NI I
Sbjct: 94 YNNYNNNYNTNYKKLQYYNIINIEQI 119
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 165 ALVDTYVPISVGPALVDTYEPISV 236
++V T++ + PAL D +PI +
Sbjct: 497 SIVGTFIILCEAPALRDNTKPIDM 520
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,590
Number of Sequences: 438
Number of extensions: 3180
Number of successful extensions: 35
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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