Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b22r
(707 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 26 0.35
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 25 0.80
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 24 1.4
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 23 2.4
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 4.3
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 4.3
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 4.3
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 22 4.3
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 4.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 5.6
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 5.6
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 5.6
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 7.4
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 7.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.8
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 9.8
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 9.8
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 9.8
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 25.8 bits (54), Expect = 0.35
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +1
Query: 520 TDSNSPDANCVVDDTVCCGQNGSVVENRASAI----LGPSTPVPGHKQGSYCWVPIYR 681
+D + D N VDD G+ + + + L PS P GH Q + W + R
Sbjct: 33 SDRDDDDENITVDDDDTDGRESLSPSSAHTVLIPQPLHPSVPRLGHPQWPFAWGSLXR 90
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 24.6 bits (51), Expect = 0.80
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 146 PVHESRPPTSSQPAQSMLFVMVLPPY 223
P H PP+ QP Q M + PPY
Sbjct: 62 PHHYGGPPSGGQPPQGMPYPR-FPPY 86
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 45 RERRRQGSGHDRSYFRKSSHQRPRCCDKADLQSHRCMS--RDRQRPASQRKA 194
R+R+ S + S+ K +R D+Q R M+ R+RQR S +A
Sbjct: 64 RKRKSISSDEENSFQGKHKSRRKAPQSFEDIQHQRVMANVRERQRTQSLNEA 115
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 309 PSQPPKPPGCRPGCSLIQEC 368
PSQ P+P RP +++ C
Sbjct: 218 PSQSPEPESVRPLSLVVRRC 237
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 207 WYYHHTETCRRFG 245
W+ H TE+ R FG
Sbjct: 429 WFEHETESGRNFG 441
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 207 WYYHHTETCRRFG 245
W+ H TE+ R FG
Sbjct: 429 WFEHETESGRNFG 441
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 207 WYYHHTETCRRFG 245
W+ H TE+ R FG
Sbjct: 429 WFEHETESGRNFG 441
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 207 WYYHHTETCRRFG 245
W+ H TE+ R FG
Sbjct: 429 WFEHETESGRNFG 441
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 207 WYYHHTETCRRFG 245
W+ H TE+ R FG
Sbjct: 429 WFEHETESGRNFG 441
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 534 RVRVGSTWGNSGGVVHHVNRHIIHPNYG 451
R ++G +G VV H+N IH N G
Sbjct: 459 RNQIGQYVTVNGDVVSHLNITAIHTNDG 486
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 648 LMTRNWSTWSQNCGSSIL-NNRSVLTAAHCIIDDAVGV 538
+ TR + Q G+ I+ +N +++T + C+I AVG+
Sbjct: 153 MWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGI 190
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 648 LMTRNWSTWSQNCGSSIL-NNRSVLTAAHCIIDDAVGV 538
+ TR + Q G+ I+ +N +++T + C+I AVG+
Sbjct: 153 MWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGI 190
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 168 GGRDSCTGDSGG 133
GGRD GD GG
Sbjct: 97 GGRDGDRGDGGG 108
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 596 STTDPF*PQHTVSSTTQLAS 537
S+T P+ P H +S + L S
Sbjct: 68 SSTSPYPPNHPLSGSKHLCS 87
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 284 SEPPNRVTPQPAAQTT 331
++PP VTP P TT
Sbjct: 1004 TKPPEPVTPAPPQVTT 1019
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -1
Query: 404 TSTT*TMLCNRPAFLDQTTTWATTRW 327
T+TT RP TT TT W
Sbjct: 1054 TTTTRRTTTTRPTTTSTTTRPTTTNW 1079
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = -2
Query: 706 EDRWR*YNDDKSVPNNSCPAYDQELEYLV 620
E W+ +D + C D+E+ Y+V
Sbjct: 263 ESAWKNLREDYNRLCRLCKRVDEEISYIV 291
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = -2
Query: 706 EDRWR*YNDDKSVPNNSCPAYDQELEYLV 620
E W+ +D + C D+E+ Y+V
Sbjct: 263 ESAWKNLREDYNRLCRLCKRVDEEISYIV 291
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = -2
Query: 706 EDRWR*YNDDKSVPNNSCPAYDQELEYLV 620
E W+ +D + C D+E+ Y+V
Sbjct: 263 ESAWKNLREDYNRLCRLCKRVDEEISYIV 291
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,020
Number of Sequences: 336
Number of extensions: 3977
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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