Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b22r
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 98 6e-21
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 96 2e-20
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 52 5e-07
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 32 0.46
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 30 1.4
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 27 9.9
U53155-8|AAC48263.1| 284|Caenorhabditis elegans Hypothetical pr... 27 9.9
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 9.9
U28991-5|AAK68311.1| 234|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 97.9 bits (233), Expect = 6e-21
Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Frame = -3
Query: 705 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI-IDDAVGVWRV 529
R+VGG T +P AAL RN +T + +CG+SIL+ ++TAAHC D+ V + V
Sbjct: 26 RVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 528 RVGSTWGNS----GGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIP 361
VG W N+ + ++ R +P Y + +DIAI+ N QP +P
Sbjct: 83 VVGD-WDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLP 140
Query: 360 GSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVC-RSRYGGNTITNNMLCA 184
++ + +GWG G +E+L+ + ++N+ C S ++++ + CA
Sbjct: 141 SKDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCA 198
Query: 183 GWLDVGGRDSCTGDSGGPLY-----HXXXXXXXXXXXXNCGHARYPGVYARVSRYTSWIQ 19
G+L+ GG DSC GDSGGP C + PG+Y V+ Y SWI
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWIS 257
Query: 18 S 16
+
Sbjct: 258 A 258
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 96.3 bits (229), Expect = 2e-20
Identities = 78/237 (32%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Frame = -3
Query: 705 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGV-WRV 529
R++GGS ++ + +P LL CG S+++ VLTAAHC D + V
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLG----HHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112
Query: 528 RVGSTWGNSGGVVHHVNRHIIHPNYG-RWSRDNDIAIMRTSSNINYVNNAVQPARIPGSN 352
RVG SG H V IHP Y + D AIMR +N + +P +P +
Sbjct: 113 RVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVN-TSTTARPICLP--S 168
Query: 351 YNLGDNQVVWAAGWGVTRFGGSLS-EQLRHVQVWVVNQSVCRS--RYGGNTITNNMLCAG 181
+N++ GWG T G SLS LR + V +++ C S Y G +MLCAG
Sbjct: 169 LPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAG 228
Query: 180 WLDVGGRDSCTGDSGGPLY----HXXXXXXXXXXXXNCGHARYPGVYARVSRYTSWI 22
+ G DSC GDSGGPL C PGVY V ++WI
Sbjct: 229 Y-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 51.6 bits (118), Expect = 5e-07
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 25/254 (9%)
Frame = -3
Query: 705 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWRVR 526
RI+GG++ I+ A L++ + CG++++++ ++TAAHC + + V
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSF-VY 93
Query: 525 VGSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNYN 346
V N+ V IH Y + DNDIA++R SS+++ + ++P + +
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLSKL--GIKPVCLVHDDSK 150
Query: 345 L---GDNQVVWAAGWGVTRFGGSL-------SEQLRHVQVWVVNQSVCRSRYG-----GN 211
L N VV G+G+T S S+ L+ V +++ C +
Sbjct: 151 LLKQYKNGVV--IGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSV 208
Query: 210 TITNNMLCAGWLDVGGRDSCTGDSGGP-LYHXXXXXXXXXXXXNCG---------HARYP 61
IT +CAG G + GDSGGP L H + G ++P
Sbjct: 209 KITGYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFP 265
Query: 60 GVYARVSRYTSWIQ 19
GVY R+S+Y WIQ
Sbjct: 266 GVYTRISKYVPWIQ 279
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 627 TWSQNCGSSILNNRSVLTAAHC 562
TWS++C ++ + R +LTA HC
Sbjct: 70 TWSKHCSGTLTSPRHILTATHC 91
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Frame = -3
Query: 435 NDIAIMRTSSNINYVNNAVQPAR--IPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHV 262
NDI I+ S I+ V A +P N G N V + GWG G + +
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGAN--VTSFGWGSDPGKGFDNAAFPMI 233
Query: 261 QVWVV---NQSVCRSRYGGNTITNNMLCAGWLDVGGRDSCTGDSGGPL 127
QV + + C +G +I + C + ++ C+GDSGG L
Sbjct: 234 QVLTLATETLATCEENWG-TSIPFDSFCTA--EEEDKNVCSGDSGGGL 278
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 348 CSLIQECGPVAQHCSR--S*CCLKYA*SQYHCHETICRSLGVLCVCSRDAPRRHCC 509
CS+ C P C + + C Y + C + CR + +C +++ + CC
Sbjct: 539 CSMGHMCDPNTHVCCKGTNRCPKDYVETGEQCTDDNCRGINQICHRTKNGKAKICC 594
>U53155-8|AAC48263.1| 284|Caenorhabditis elegans Hypothetical
protein ZC513.1 protein.
Length = 284
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 685 NDDKSVPNNSCPAYDQE----LEYLVPELRKLYSQQPIRF 578
N+ KS + CP + + YL+PE+R LY + F
Sbjct: 88 NEMKSFVSTQCPTKKHQTYVCVGYLIPEIRHLYPDSTVSF 127
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 348 CSLIQECGPVAQHCSRS*CCLKY 416
C + +C P CS++ CCLKY
Sbjct: 412 CGVPCQCQPGYVQCSQNLCCLKY 434
>U28991-5|AAK68311.1| 234|Caenorhabditis elegans Hypothetical
protein F08F8.8 protein.
Length = 234
Score = 27.5 bits (58), Expect = 9.9
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = -3
Query: 561 IIDDAVGVWRVRVGSTWGNSGGVVHHVNRH-IIHPNYG---RWSRDN-DIAIMR----TS 409
I DD V + ++W N+ + H + RH I +YG R +RDN D + R +S
Sbjct: 68 INDDMNDVAGAQSSASWANNPAIQHTLRRHREILRDYGSEYRRARDNVDQVLQRELLLSS 127
Query: 408 SNINYVNNAVQPARIPGSNYNLGDN 334
SN N NN + R G + L +N
Sbjct: 128 SNENR-NNPILNNRARGYDMYLKEN 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,050,568
Number of Sequences: 27780
Number of extensions: 376580
Number of successful extensions: 1209
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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