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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b22r
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...   110   1e-26
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.23 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.53 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.0  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   6.6  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   6.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.6  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   6.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score =  110 bits (264), Expect = 1e-26
 Identities = 82/248 (33%), Positives = 119/248 (47%), Gaps = 16/248 (6%)
 Frame = -3

Query: 705 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWRVR 526
           RIVGG+ T IN +P +A +  T         CG++I++ R VLTAAHCIID+      + 
Sbjct: 160 RIVGGTNTGINEFPMMAGIKRTYEPG---MICGATIISKRYVLTAAHCIIDENTTKLAIV 216

Query: 525 VGS-TWGN----SGGVVHHVNRHIIHPNYGRWSRD----NDIAIMRTSSNINYVNNAVQP 373
           VG   W +    +  V+H +N+ IIHP Y    +D    NDIA+++T  +I +  + V P
Sbjct: 217 VGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKF-GDKVGP 275

Query: 372 ARIPGSNY-NLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNN 196
           A +P  ++ +      V   GWG T F G LS  L+   + ++ Q  C   YG   I  N
Sbjct: 276 ACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYYG--NIMVN 333

Query: 195 MLCAGWLDVGGRDSCTGDSGGPLY------HXXXXXXXXXXXXNCGHARYPGVYARVSRY 34
            +CA      G+D+C  DSGGP+                     CG  +YP    +V  Y
Sbjct: 334 AMCA---YAKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECG--KYPNGNTKVGSY 388

Query: 33  TSWIQSNS 10
             WI S +
Sbjct: 389 IDWIVSQT 396


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 402 CCLKYA*SQYHCHETICRSLGVLCVCSRDAPRRH 503
           C  KY      C E    S   +CVC R  PRRH
Sbjct: 82  CASKYCGIGKEC-ELSPNSTIAVCVCMRKCPRRH 114


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 531 VRVGSTWGNSGGVVHHVNRHIIHPNY 454
           VR  S   N GGV H  N H+ H N+
Sbjct: 261 VRRDSRRKNYGGVYHLDNHHVHHANH 286


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/49 (20%), Positives = 24/49 (48%)
 Frame = -3

Query: 495 VVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNY 349
           ++  ++ + IH N  +++ +N+    +   NINY+     P  +   N+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNF 129


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/49 (20%), Positives = 24/49 (48%)
 Frame = -3

Query: 495 VVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNY 349
           ++  ++ + IH N  +++ +N+    +   NINY+     P  +   N+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNF 129


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/49 (20%), Positives = 24/49 (48%)
 Frame = -3

Query: 495 VVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNY 349
           ++  ++ + IH N  +++ +N+    +   NINY+     P  +   N+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNF 129


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/49 (20%), Positives = 24/49 (48%)
 Frame = -3

Query: 495 VVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNY 349
           ++  ++ + IH N  +++ +N+    +   NINY+     P  +   N+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNF 129


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
 Frame = -3

Query: 405 NINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVV---NQSV 235
           N+++V N   P  I    + +G    V   G   + F       LR   V ++   NQSV
Sbjct: 519 NVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFDPEEDAPLRGDLVRILKQANQSV 578

Query: 234 CRSRYGGNTITNNMLCAGWLDVGGRD 157
                GGN   N M   G    GG D
Sbjct: 579 PDWMMGGNANRNFMPGRGISKFGGED 604


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -2

Query: 706 EDRWR*YNDDKSVPNNSCPAYDQELEYLVPELRK 605
           EDRW       SV   S   +    E L+P L K
Sbjct: 19  EDRWEEIRRQASVEQPSFSVHQVYPENLIPRLAK 52


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 592 VENRASAILGPSTPVPGHKQGSYCWVPIYR 681
           + NR+  + G STP  G +     + P +R
Sbjct: 383 IRNRSGLVSGSSTPGTGREHDPAKFPPSFR 412


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/45 (17%), Positives = 21/45 (46%)
 Frame = -3

Query: 495 VVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIP 361
           ++  ++ +  + NY  ++ + +    +   NINY+     P  +P
Sbjct: 81  IISSLSNNYNYSNYNNYNNNYNNYNKKLYYNINYIEQIPVPVPVP 125


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 534 RVRVGSTWGNSGGVVHHVNRHIIHPNYG 451
           R++VG     +G VV H+N    H N G
Sbjct: 439 RLQVGQYVTVNGDVVSHLNISSTHTNDG 466


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/56 (19%), Positives = 26/56 (46%)
 Frame = -3

Query: 528 RVGSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIP 361
           ++ S+  N+    ++ N +  + NY  ++ + +    +   NINY+     P  +P
Sbjct: 313 KIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYIEQIPVPVPVP 368


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,651
Number of Sequences: 438
Number of extensions: 4823
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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